RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 CCDC174Q6PII3 467 aa21.71■■□□□ 1.07
SHKBP1-202ENST00000593764 CYB5R4Q7L1T6 521 aa21.71■■□□□ 1.07
SHKBP1-202ENST00000593764 PNMA1Q8ND90 353 aa21.71■■□□□ 1.07
SHKBP1-202ENST00000593764 DDX11Q96FC9 970 aa21.71■■□□□ 1.07
SHKBP1-202ENST00000593764 TINF2Q9BSI4 451 aa21.71■■□□□ 1.07
SHKBP1-202ENST00000593764 ESYT1Q9BSJ8 1104 aa21.71■■□□□ 1.07
SHKBP1-202ENST00000593764 RANBP17Q9H2T7 1088 aaKnown RBP21.71■■□□□ 1.07
SHKBP1-202ENST00000593764 HOMER2Q9NSB8 354 aa21.71■■□□□ 1.07
SHKBP1-202ENST00000593764 DDX20Q9UHI6 824 aaKnown RBP21.71■■□□□ 1.07
SHKBP1-202ENST00000593764 TNKSO95271 1327 aa21.71■■□□□ 1.07
SHKBP1-202ENST00000593764 SMCHD1A6NHR9 2005 aa21.7■■□□□ 1.06
SHKBP1-202ENST00000593764 SEC23AQ15436 765 aa21.7■■□□□ 1.06
SHKBP1-202ENST00000593764 NECAB2Q7Z6G3 386 aa21.7■■□□□ 1.06
SHKBP1-202ENST00000593764 LSG1Q9H089 658 aaKnown RBP21.7■■□□□ 1.06
SHKBP1-202ENST00000593764 PLXNA1Q9UIW2 1896 aa21.7■■□□□ 1.06
SHKBP1-202ENST00000593764 CEP290O15078 2479 aa21.7■■□□□ 1.06
SHKBP1-202ENST00000593764 E7EWF7 191 aa21.69■■□□□ 1.06
SHKBP1-202ENST00000593764 TKFCQ3LXA3 575 aa21.69■■□□□ 1.06
SHKBP1-202ENST00000593764 STOX1Q6ZVD7 989 aa21.69■■□□□ 1.06
SHKBP1-202ENST00000593764 ANKRD35Q8N283 1001 aa21.69■■□□□ 1.06
SHKBP1-202ENST00000593764 FGD4Q96M96 766 aa21.69■■□□□ 1.06
SHKBP1-202ENST00000593764 TRERF1Q96PN7 1200 aa21.69■■□□□ 1.06
SHKBP1-202ENST00000593764 HTATIP2Q9BUP3 242 aa21.69■■□□□ 1.06
SHKBP1-202ENST00000593764 ACAD9Q9H845 621 aa21.69■■□□□ 1.06
SHKBP1-202ENST00000593764 KAT14Q9H8E8 782 aa21.69■■□□□ 1.06
SHKBP1-202ENST00000593764 RNF146Q9NTX7 359 aa21.69■■□□□ 1.06
SHKBP1-202ENST00000593764 RBM8AQ9Y5S9 174 aaKnown RBP21.69■■□□□ 1.06
SHKBP1-202ENST00000593764 DNAH12Q6ZR08 3092 aa21.69■■□□□ 1.06
SHKBP1-202ENST00000593764 SEPT4O43236 478 aa21.68■■□□□ 1.06
SHKBP1-202ENST00000593764 MSCO60682 206 aa21.68■■□□□ 1.06
SHKBP1-202ENST00000593764 ICAM1P05362 532 aa21.68■■□□□ 1.06
SHKBP1-202ENST00000593764 GOLGA8HP0CJ92 632 aa21.68■■□□□ 1.06
SHKBP1-202ENST00000593764 ALAS1P13196 640 aa21.68■■□□□ 1.06
SHKBP1-202ENST00000593764 TAL1P17542 331 aaPredicted RBP21.68■■□□□ 1.06
SHKBP1-202ENST00000593764 MUM1L1Q5H9M0 696 aa21.68■■□□□ 1.06
SHKBP1-202ENST00000593764 GPATCH4Q5T3I0 446 aaKnown RBP21.68■■□□□ 1.06
SHKBP1-202ENST00000593764 MAMDC4Q6UXC1 1216 aa21.68■■□□□ 1.06
SHKBP1-202ENST00000593764 DPF3Q92784 378 aa21.68■■□□□ 1.06
SHKBP1-202ENST00000593764 UBAC1Q9BSL1 405 aa21.68■■□□□ 1.06
SHKBP1-202ENST00000593764 A1CFQ9NQ94 594 aaKnown RBP21.68■■□□□ 1.06
SHKBP1-202ENST00000593764 NRBP1Q9UHY1 535 aa21.68■■□□□ 1.06
SHKBP1-202ENST00000593764 TRDNQ13061 729 aa21.67■■□□□ 1.06
SHKBP1-202ENST00000593764 KIAA1211Q6ZU35 1233 aa21.67■■□□□ 1.06
SHKBP1-202ENST00000593764 ZNF467Q7Z7K2 595 aaPredicted RBP21.67■■□□□ 1.06
SHKBP1-202ENST00000593764 MSL3Q8N5Y2 521 aaKnown RBP21.67■■□□□ 1.06
SHKBP1-202ENST00000593764 CCPG1Q9ULG6 757 aa21.67■■□□□ 1.06
SHKBP1-202ENST00000593764 PFASO15067 1338 aa21.66■■□□□ 1.06
SHKBP1-202ENST00000593764 SNAI1O95863 264 aaPredicted RBP21.66■■□□□ 1.06
SHKBP1-202ENST00000593764 ZNF865P0CJ78 1059 aaPredicted RBP21.66■■□□□ 1.06
SHKBP1-202ENST00000593764 COL6A1P12109 1028 aa21.66■■□□□ 1.06
SHKBP1-202ENST00000593764 CNTN2Q02246 1040 aa21.66■■□□□ 1.06
SHKBP1-202ENST00000593764 IFIT1BQ5T764 474 aaKnown RBP21.66■■□□□ 1.06
SHKBP1-202ENST00000593764 ANO1Q5XXA6 986 aa21.66■■□□□ 1.06
SHKBP1-202ENST00000593764 FAM133AQ8N9E0 248 aa21.66■■□□□ 1.06
SHKBP1-202ENST00000593764 UBA5Q9GZZ9 404 aa21.66■■□□□ 1.06
SHKBP1-202ENST00000593764 CPVLQ9H3G5 476 aa21.66■■□□□ 1.06
SHKBP1-202ENST00000593764 SYNGAP1Q96PV0 1343 aa21.65■■□□□ 1.06
SHKBP1-202ENST00000593764 FRMPD3Q5JV73 1810 aa21.65■■□□□ 1.06
SHKBP1-202ENST00000593764 H0YGN5 161 aa21.65■■□□□ 1.06
SHKBP1-202ENST00000593764 NCOA7Q8NI08 942 aa21.65■■□□□ 1.06
SHKBP1-202ENST00000593764 C11orf49Q9H6J7 331 aa21.65■■□□□ 1.06
SHKBP1-202ENST00000593764 NEFLP07196 543 aa21.64■■□□□ 1.05
SHKBP1-202ENST00000593764 NECTIN1Q15223 517 aa21.64■■□□□ 1.05
SHKBP1-202ENST00000593764 SENP2Q9HC62 589 aa21.64■■□□□ 1.05
SHKBP1-202ENST00000593764 CYP39A1Q9NYL5 469 aa21.64■■□□□ 1.05
SHKBP1-202ENST00000593764 SOWAHBA6NEL2 793 aa21.63■■□□□ 1.05
SHKBP1-202ENST00000593764 POTEB2H3BUK9 544 aa21.63■■□□□ 1.05
SHKBP1-202ENST00000593764 ANTXR2P58335 489 aa21.63■■□□□ 1.05
SHKBP1-202ENST00000593764 ASPRV1Q53RT3 343 aa21.63■■□□□ 1.05
SHKBP1-202ENST00000593764 CHST3Q7LGC8 479 aa21.63■■□□□ 1.05
SHKBP1-202ENST00000593764 RALYLQ86SE5 291 aaKnown RBP21.63■■□□□ 1.05
SHKBP1-202ENST00000593764 MB21D2Q8IYB1 491 aaPredicted RBP21.63■■□□□ 1.05
SHKBP1-202ENST00000593764 ASTN1O14525 1302 aa21.62■■□□□ 1.05
SHKBP1-202ENST00000593764 NFIBO00712 420 aa21.62■■□□□ 1.05
SHKBP1-202ENST00000593764 IFIT3O14879 490 aaKnown RBP21.62■■□□□ 1.05
SHKBP1-202ENST00000593764 SLC27A2O14975 620 aa21.62■■□□□ 1.05
SHKBP1-202ENST00000593764 PARP1P09874 1014 aaKnown RBP21.62■■□□□ 1.05
SHKBP1-202ENST00000593764 COL9A3Q14050 684 aaPredicted RBP21.62■■□□□ 1.05
SHKBP1-202ENST00000593764 ADGRF4Q8IZF3 695 aa21.62■■□□□ 1.05
SHKBP1-202ENST00000593764 STAG2Q8N3U4 1231 aa21.62■■□□□ 1.05
SHKBP1-202ENST00000593764 IGDCC4Q8TDY8 1250 aa21.62■■□□□ 1.05
SHKBP1-202ENST00000593764 CLEC4DQ8WXI8 215 aa21.62■■□□□ 1.05
SHKBP1-202ENST00000593764 ANO2Q9NQ90 1003 aa21.62■■□□□ 1.05
SHKBP1-202ENST00000593764 CNPY2Q9Y2B0 182 aa21.62■■□□□ 1.05
SHKBP1-202ENST00000593764 ALPK3Q96L96 1907 aa21.62■■□□□ 1.05
SHKBP1-202ENST00000593764 WDR19Q8NEZ3 1342 aa21.61■■□□□ 1.05
SHKBP1-202ENST00000593764 DNM1LO00429 736 aa21.61■■□□□ 1.05
SHKBP1-202ENST00000593764 EVI5O60447 810 aa21.61■■□□□ 1.05
SHKBP1-202ENST00000593764 GJC2Q5T442 439 aaPredicted RBP21.61■■□□□ 1.05
SHKBP1-202ENST00000593764 CREB3L3Q68CJ9 461 aa21.61■■□□□ 1.05
SHKBP1-202ENST00000593764 NSMFQ6X4W1 530 aa21.61■■□□□ 1.05
SHKBP1-202ENST00000593764 ARMCX2Q7L311 632 aa21.61■■□□□ 1.05
SHKBP1-202ENST00000593764 CCDC144CPQ8IYA2 1237 aa21.61■■□□□ 1.05
SHKBP1-202ENST00000593764 KATNBL1Q9H079 304 aa21.61■■□□□ 1.05
SHKBP1-202ENST00000593764 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.61■■□□□ 1.05
SHKBP1-202ENST00000593764 MCM3APO60318 1980 aa21.61■■□□□ 1.05
SHKBP1-202ENST00000593764 CDC45O75419 566 aa21.6■■□□□ 1.05
SHKBP1-202ENST00000593764 ACVR2BQ13705 512 aa21.6■■□□□ 1.05
SHKBP1-202ENST00000593764 ARRDC4Q8NCT1 418 aa21.6■■□□□ 1.05
SHKBP1-202ENST00000593764 PURBQ96QR8 312 aaKnown RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms