RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 IL16Q14005 1332 aa9.59□□□□□ -0.87
VMP1-213ENST00000591877 XYLBO75191 536 aa9.59□□□□□ -0.87
VMP1-213ENST00000591877 BBOX1O75936 387 aa9.59□□□□□ -0.87
VMP1-213ENST00000591877 ELNP15502 786 aa9.59□□□□□ -0.87
VMP1-213ENST00000591877 SPEM2Q0P670 501 aa9.59□□□□□ -0.87
VMP1-213ENST00000591877 GRAPQ13588 217 aa9.59□□□□□ -0.87
VMP1-213ENST00000591877 SF3B3Q15393 1217 aaKnown RBP9.59□□□□□ -0.87
VMP1-213ENST00000591877 TAF1CQ15572 869 aaPredicted RBP9.59□□□□□ -0.87
VMP1-213ENST00000591877 AOC3Q16853 763 aa9.59□□□□□ -0.87
VMP1-213ENST00000591877 CCDC30Q5VVM6 783 aa9.59□□□□□ -0.87
VMP1-213ENST00000591877 DDX46Q7L014 1031 aaKnown RBP9.59□□□□□ -0.87
VMP1-213ENST00000591877 G2E3Q7L622 706 aa9.59□□□□□ -0.87
VMP1-213ENST00000591877 GRAPLQ8TC17 118 aaPredicted RBP9.59□□□□□ -0.87
VMP1-213ENST00000591877 CELF1Q92879 486 aaKnown RBP9.59□□□□□ -0.87
VMP1-213ENST00000591877 LENG1Q96BZ8 264 aaPredicted RBP9.59□□□□□ -0.87
VMP1-213ENST00000591877 MYD88Q99836 296 aa9.59□□□□□ -0.87
VMP1-213ENST00000591877 TANGO6Q9C0B7 1094 aa9.59□□□□□ -0.87
VMP1-213ENST00000591877 CHRDQ9H2X0 955 aa9.59□□□□□ -0.87
VMP1-213ENST00000591877 CAPN10Q9HC96 672 aa9.59□□□□□ -0.87
VMP1-213ENST00000591877 ABI2Q9NYB9 513 aaPredicted RBP9.59□□□□□ -0.87
VMP1-213ENST00000591877 MYH3P11055 1940 aa9.58□□□□□ -0.88
VMP1-213ENST00000591877 IQCA1LA6NCM1 817 aa9.58□□□□□ -0.88
VMP1-213ENST00000591877 IRS4O14654 1257 aaPredicted RBP9.58□□□□□ -0.88
VMP1-213ENST00000591877 LILRB5O75023 590 aa9.58□□□□□ -0.88
VMP1-213ENST00000591877 GRNP28799 593 aaKnown RBP9.58□□□□□ -0.88
VMP1-213ENST00000591877 NRG1Q02297 640 aaPredicted RBP9.58□□□□□ -0.88
VMP1-213ENST00000591877 TWISTNBQ3B726 338 aaPredicted RBP9.58□□□□□ -0.88
VMP1-213ENST00000591877 GPC2Q8N158 579 aa9.58□□□□□ -0.88
VMP1-213ENST00000591877 ZBTB38Q8NAP3 1195 aaPredicted RBP9.58□□□□□ -0.88
VMP1-213ENST00000591877 JDP2Q8WYK2 163 aa9.58□□□□□ -0.88
VMP1-213ENST00000591877 JARID2Q92833 1246 aaPredicted RBP9.58□□□□□ -0.88
VMP1-213ENST00000591877 CEP63Q96MT8 703 aa9.58□□□□□ -0.88
VMP1-213ENST00000591877 METTL22Q9BUU2 404 aaPredicted RBP9.58□□□□□ -0.88
VMP1-213ENST00000591877 ACBD3Q9H3P7 528 aa9.58□□□□□ -0.88
VMP1-213ENST00000591877 NPHS2Q9NP85 383 aa9.58□□□□□ -0.88
VMP1-213ENST00000591877 USP20Q9Y2K6 914 aa9.58□□□□□ -0.88
VMP1-213ENST00000591877 FANCIQ9NVI1 1328 aa9.57□□□□□ -0.88
VMP1-213ENST00000591877 PI4KAP2A4QPH2 592 aa9.57□□□□□ -0.88
VMP1-213ENST00000591877 PPIP5K2O43314 1243 aa9.57□□□□□ -0.88
VMP1-213ENST00000591877 PCCAP05165 728 aaPredicted RBP9.57□□□□□ -0.88
VMP1-213ENST00000591877 IGKV5-2P06315 115 aa9.57□□□□□ -0.88
VMP1-213ENST00000591877 USP17L7P0C7H9 530 aa9.57□□□□□ -0.88
VMP1-213ENST00000591877 EPHX2P34913 555 aa9.57□□□□□ -0.88
VMP1-213ENST00000591877 PI16Q6UXB8 463 aa9.57□□□□□ -0.88
VMP1-213ENST00000591877 DPP8Q6V1X1 898 aaPredicted RBP9.57□□□□□ -0.88
VMP1-213ENST00000591877 KSR2Q6VAB6 950 aa9.57□□□□□ -0.88
VMP1-213ENST00000591877 USP48Q86UV5 1035 aa9.57□□□□□ -0.88
VMP1-213ENST00000591877 PI4KAP1Q8N8J0 262 aa9.57□□□□□ -0.88
VMP1-213ENST00000591877 CCDC191Q8NCU4 936 aa9.57□□□□□ -0.88
VMP1-213ENST00000591877 VPS33BQ9H267 617 aa9.57□□□□□ -0.88
VMP1-213ENST00000591877 PRKAG2Q9UGJ0 569 aa9.57□□□□□ -0.88
VMP1-213ENST00000591877 HACL1Q9UJ83 578 aa9.57□□□□□ -0.88
VMP1-213ENST00000591877 MAP3K2Q9Y2U5 619 aa9.57□□□□□ -0.88
VMP1-213ENST00000591877 PASKQ96RG2 1323 aa9.56□□□□□ -0.88
VMP1-213ENST00000591877 SPEF2Q9C093 1822 aa9.56□□□□□ -0.88
VMP1-213ENST00000591877 VAMP4O75379 141 aa9.56□□□□□ -0.88
VMP1-213ENST00000591877 EIF6P56537 245 aaKnown RBP9.56□□□□□ -0.88
VMP1-213ENST00000591877 CXCL9Q07325 125 aa9.56□□□□□ -0.88
VMP1-213ENST00000591877 KIAA2012Q0VF49 1180 aa9.56□□□□□ -0.88
VMP1-213ENST00000591877 LDHDQ86WU2 507 aa9.56□□□□□ -0.88
VMP1-213ENST00000591877 WDR63Q8IWG1 891 aa9.56□□□□□ -0.88
VMP1-213ENST00000591877 NIM1KQ8IY84 436 aa9.56□□□□□ -0.88
VMP1-213ENST00000591877 JMYQ8N9B5 988 aa9.56□□□□□ -0.88
VMP1-213ENST00000591877 SSBP4Q9BWG4 385 aaPredicted RBP9.56□□□□□ -0.88
VMP1-213ENST00000591877 BCO2Q9BYV7 579 aa9.56□□□□□ -0.88
VMP1-213ENST00000591877 SRA1Q9HD15 236 aaKnown RBP9.56□□□□□ -0.88
VMP1-213ENST00000591877 BRD7Q9NPI1 651 aa9.56□□□□□ -0.88
VMP1-213ENST00000591877 SEC31BQ9NQW1 1179 aa9.56□□□□□ -0.88
VMP1-213ENST00000591877 YDJCA8MPS7 323 aa9.55□□□□□ -0.88
VMP1-213ENST00000591877 DDX58O95786 925 aaKnown RBP9.55□□□□□ -0.88
VMP1-213ENST00000591877 GSTT1P30711 240 aa9.55□□□□□ -0.88
VMP1-213ENST00000591877 EPS15P42566 896 aa9.55□□□□□ -0.88
VMP1-213ENST00000591877 RAC1P63000 192 aa9.55□□□□□ -0.88
VMP1-213ENST00000591877 GPSM2P81274 684 aa9.55□□□□□ -0.88
VMP1-213ENST00000591877 EXOSC9Q06265 439 aaKnown RBP9.55□□□□□ -0.88
VMP1-213ENST00000591877 TBC1D8BQ0IIM8 1120 aa9.55□□□□□ -0.88
VMP1-213ENST00000591877 CWF19L2Q2TBE0 894 aaKnown RBP9.55□□□□□ -0.88
VMP1-213ENST00000591877 FAM9BQ8IZU0 186 aa9.55□□□□□ -0.88
VMP1-213ENST00000591877 SUPT20HQ8NEM7 779 aa9.55□□□□□ -0.88
VMP1-213ENST00000591877 CHMP4AQ9BY43 222 aa9.55□□□□□ -0.88
VMP1-213ENST00000591877 TMX4Q9H1E5 349 aaPredicted RBP9.55□□□□□ -0.88
VMP1-213ENST00000591877 CWC25Q9NXE8 425 aaPredicted RBP9.55□□□□□ -0.88
VMP1-213ENST00000591877 ZNRF3Q9ULT6 936 aa9.55□□□□□ -0.88
VMP1-213ENST00000591877 INPP5FQ9Y2H2 1132 aa9.55□□□□□ -0.88
VMP1-213ENST00000591877 SCN9AQ15858 1988 aa9.55□□□□□ -0.88
VMP1-213ENST00000591877 CDHR2Q9BYE9 1310 aa9.55□□□□□ -0.88
VMP1-213ENST00000591877 PDE8AO60658 829 aa9.54□□□□□ -0.88
VMP1-213ENST00000591877 EDN3P14138 238 aa9.54□□□□□ -0.88
VMP1-213ENST00000591877 ATP2B1P20020 1258 aa9.54□□□□□ -0.88
VMP1-213ENST00000591877 RPS8P62241 208 aaKnown RBP9.54□□□□□ -0.88
VMP1-213ENST00000591877 RACK1P63244 317 aaKnown RBP9.54□□□□□ -0.88
VMP1-213ENST00000591877 ZNF394Q53GI3 561 aa9.54□□□□□ -0.88
VMP1-213ENST00000591877 TTC39BQ5VTQ0 682 aaPredicted RBP9.54□□□□□ -0.88
VMP1-213ENST00000591877 KIAA0319Q5VV43 1072 aa9.54□□□□□ -0.88
VMP1-213ENST00000591877 MAP1SQ66K74 1059 aaPredicted RBP9.54□□□□□ -0.88
VMP1-213ENST00000591877 ERMP1Q7Z2K6 904 aa9.54□□□□□ -0.88
VMP1-213ENST00000591877 C1orf127Q8N9H9 656 aa9.54□□□□□ -0.88
VMP1-213ENST00000591877 NUDT8Q8WV74 236 aa9.54□□□□□ -0.88
VMP1-213ENST00000591877 NOC4LQ9BVI4 516 aaKnown RBP9.54□□□□□ -0.88
VMP1-213ENST00000591877 STK31Q9BXU1 1019 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms