RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 IER5Q5VY09 327 aa7.02□□□□□ -1.28
SMAD4-212ENST00000591126 PROCA1Q8NCQ7 364 aaPredicted RBP7.02□□□□□ -1.28
SMAD4-212ENST00000591126 RIOK1Q9BRS2 568 aaKnown RBP7.02□□□□□ -1.28
SMAD4-212ENST00000591126 MSRAQ9UJ68 235 aa7.02□□□□□ -1.28
SMAD4-212ENST00000591126 PPME1Q9Y570 386 aa7.02□□□□□ -1.28
SMAD4-212ENST00000591126 NUB1Q9Y5A7 615 aa7.02□□□□□ -1.28
SMAD4-212ENST00000591126 SFPQP23246 707 aaKnown RBP eCLIP7.02□□□□□ -1.29
SMAD4-212ENST00000591126 CTNNA2P26232 953 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 CDK8P49336 464 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 SP4Q02446 784 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 LETM2Q2VYF4 491 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 C1orf228Q6PIY5 440 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 CHST3Q7LGC8 479 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 ZNF654Q8IZM8 581 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 THEM5Q8N1Q8 247 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 KIAA1524Q8TCG1 905 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 CELF1Q92879 486 aaKnown RBP7.02□□□□□ -1.29
SMAD4-212ENST00000591126 PPP1R9BQ96SB3 815 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 TRIM62Q9BVG3 475 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 HMX1Q9NP08 348 aaPredicted RBP7.02□□□□□ -1.29
SMAD4-212ENST00000591126 LRWD1Q9UFC0 647 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 AMPD2Q01433 879 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 PPIL2Q13356 520 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 KRT24Q2M2I5 525 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 HS1BP3Q53T59 392 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 SLFN12LQ6IEE8 588 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 INTS5Q6P9B9 1019 aaKnown RBP7.02□□□□□ -1.29
SMAD4-212ENST00000591126 GPR101Q96P66 508 aaPredicted RBP7.02□□□□□ -1.29
SMAD4-212ENST00000591126 SLC12A6Q9UHW9 1150 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 DPYSL4O14531 572 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 GH2P01242 217 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 ZBTB48P10074 688 aaPredicted RBP7.02□□□□□ -1.29
SMAD4-212ENST00000591126 TBC1D8BQ0IIM8 1120 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 ALX1Q15699 326 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 ZMYM1Q5SVZ6 1142 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 CAVIN1Q6NZI2 390 aaKnown RBP7.02□□□□□ -1.29
SMAD4-212ENST00000591126 ARMCX5Q6P1M9 558 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 CAGE1Q8TC20 777 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 ALS2CR12Q96Q35 445 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 ZBTB21Q9ULJ3 1066 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 MED1Q15648 1581 aaPredicted RBP7.02□□□□□ -1.29
SMAD4-212ENST00000591126 WDR19Q8NEZ3 1342 aa7.02□□□□□ -1.29
SMAD4-212ENST00000591126 AHDC1Q5TGY3 1603 aaPredicted RBP7.02□□□□□ -1.29
SMAD4-212ENST00000591126 CSF1RP07333 972 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 CHMLP26374 656 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 GBP2P32456 591 aaPredicted RBP7.01□□□□□ -1.29
SMAD4-212ENST00000591126 PHKA2P46019 1235 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 CEBPZQ03701 1054 aaKnown RBP7.01□□□□□ -1.29
SMAD4-212ENST00000591126 CCDC14Q49A88 953 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 SNRNP48Q6IEG0 339 aaKnown RBP7.01□□□□□ -1.29
SMAD4-212ENST00000591126 C15orf52Q6ZUT6 534 aaKnown RBP7.01□□□□□ -1.29
SMAD4-212ENST00000591126 SND1Q7KZF4 910 aaKnown RBP eCLIP7.01□□□□□ -1.29
SMAD4-212ENST00000591126 NEK8Q86SG6 692 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 TIPINQ9BVW5 301 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 STIM2Q9P246 746 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 LTBP3Q9NS15 1303 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.01□□□□□ -1.29
SMAD4-212ENST00000591126 ZNF189O75820 626 aaPredicted RBP7.01□□□□□ -1.29
SMAD4-212ENST00000591126 MAP2K2P36507 400 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 KRT17Q04695 432 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 SEPT2Q15019 361 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 LRRC24Q50LG9 513 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 EHBP1Q8NDI1 1231 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 MCPH1Q8NEM0 835 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 INTS4Q96HW7 963 aaKnown RBP7.01□□□□□ -1.29
SMAD4-212ENST00000591126 AK8Q96MA6 479 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 AKT3Q9Y243 479 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 PXDNLA1KZ92 1463 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 DENND3A2RUS2 1198 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 RPS6KB1P23443 525 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 NCAPH2Q6IBW4 605 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 PDZD4Q76G19 769 aaPredicted RBP7.01□□□□□ -1.29
SMAD4-212ENST00000591126 TRIML1Q8N9V2 468 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 ZDHHC15Q96MV8 337 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 NCAPGQ9BPX3 1015 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 RNF26Q9BY78 433 aaPredicted RBP7.01□□□□□ -1.29
SMAD4-212ENST00000591126 GCOM2Q9BZD3 368 aaPredicted RBP7.01□□□□□ -1.29
SMAD4-212ENST00000591126 TSPY26PQ9H489 355 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 RNF146Q9NTX7 359 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 GINS2Q9Y248 185 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 COL4A3BPQ9Y5P4 624 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 V9GY48 417 aaPredicted RBP7.01□□□□□ -1.29
SMAD4-212ENST00000591126 CCNT1O60563 726 aaKnown RBP7.01□□□□□ -1.29
SMAD4-212ENST00000591126 LDHAP00338 332 aaKnown RBP7.01□□□□□ -1.29
SMAD4-212ENST00000591126 PAX3P23760 479 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 ANXA13P27216 316 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 PPP2R3AQ06190 1150 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 LAMC2Q13753 1193 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 XKR9Q5GH70 373 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 CEP128Q6ZU80 1094 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 MIGA2Q7L4E1 593 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 TADA2BQ86TJ2 420 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 CCDC144CPQ8IYA2 1237 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 BBS5Q8N3I7 341 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 SCFD2Q8WU76 684 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 EDC3Q96F86 508 aaKnown RBP7.01□□□□□ -1.29
SMAD4-212ENST00000591126 SPAG5Q96R06 1193 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 PRDM5Q9NQX1 630 aaPredicted RBP7.01□□□□□ -1.29
SMAD4-212ENST00000591126 TMEM51Q9NW97 253 aa7.01□□□□□ -1.29
SMAD4-212ENST00000591126 PPLO60437 1756 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms