RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 CWC22Q9HCG8 908 aaKnown RBP22.25■■□□□ 1.15
DDX39A-214ENST00000590556 HPS5Q9UPZ3 1129 aa22.25■■□□□ 1.15
DDX39A-214ENST00000590556 BAZ2BQ9UIF8 2168 aaKnown RBP22.25■■□□□ 1.15
DDX39A-214ENST00000590556 CCDC196A0A1B0GTZ2 297 aa22.24■■□□□ 1.15
DDX39A-214ENST00000590556 SMARCA1P28370 1054 aa22.24■■□□□ 1.15
DDX39A-214ENST00000590556 MAPK4P31152 587 aa22.24■■□□□ 1.15
DDX39A-214ENST00000590556 FCGRTP55899 365 aa22.24■■□□□ 1.15
DDX39A-214ENST00000590556 SLC35G1Q2M3R5 365 aa22.24■■□□□ 1.15
DDX39A-214ENST00000590556 WDR78Q5VTH9 848 aa22.24■■□□□ 1.15
DDX39A-214ENST00000590556 TMTC3Q6ZXV5 915 aa22.24■■□□□ 1.15
DDX39A-214ENST00000590556 NCAPG2Q86XI2 1143 aa22.24■■□□□ 1.15
DDX39A-214ENST00000590556 RIOX2Q8IUF8 465 aa22.24■■□□□ 1.15
DDX39A-214ENST00000590556 SRBD1Q8N5C6 995 aaKnown RBP22.24■■□□□ 1.15
DDX39A-214ENST00000590556 ARHGAP39Q9C0H5 1083 aa22.24■■□□□ 1.15
DDX39A-214ENST00000590556 RIOX1Q9H6W3 641 aa22.24■■□□□ 1.15
DDX39A-214ENST00000590556 EFCC1Q9HA90 598 aa22.24■■□□□ 1.15
DDX39A-214ENST00000590556 CYTH3O43739 400 aa22.23■■□□□ 1.15
DDX39A-214ENST00000590556 SLC25A27O95847 323 aa22.23■■□□□ 1.15
DDX39A-214ENST00000590556 ICAM1P05362 532 aa22.23■■□□□ 1.15
DDX39A-214ENST00000590556 ERCC3P19447 782 aa22.23■■□□□ 1.15
DDX39A-214ENST00000590556 CTGFP29279 349 aa22.23■■□□□ 1.15
DDX39A-214ENST00000590556 COPB2P35606 906 aa22.23■■□□□ 1.15
DDX39A-214ENST00000590556 CDC37Q16543 378 aaPredicted RBP22.23■■□□□ 1.15
DDX39A-214ENST00000590556 NOL8Q76FK4 1167 aaKnown RBP22.23■■□□□ 1.15
DDX39A-214ENST00000590556 CMTR1Q8N1G2 835 aaKnown RBP22.23■■□□□ 1.15
DDX39A-214ENST00000590556 SHCBP1Q8NEM2 672 aa22.23■■□□□ 1.15
DDX39A-214ENST00000590556 TRIM47Q96LD4 638 aa22.23■■□□□ 1.15
DDX39A-214ENST00000590556 AGBL1Q96MI9 1066 aa22.23■■□□□ 1.15
DDX39A-214ENST00000590556 SPZ1Q9BXG8 430 aa22.23■■□□□ 1.15
DDX39A-214ENST00000590556 PRDM10Q9NQV6 1147 aa22.23■■□□□ 1.15
DDX39A-214ENST00000590556 FAM217BQ9NTX9 383 aaPredicted RBP22.23■■□□□ 1.15
DDX39A-214ENST00000590556 MGAMO43451 1857 aa22.23■■□□□ 1.15
DDX39A-214ENST00000590556 ZNF536O15090 1300 aa22.23■■□□□ 1.15
DDX39A-214ENST00000590556 TNPO2O14787 897 aaKnown RBP22.22■■□□□ 1.15
DDX39A-214ENST00000590556 CDC27P30260 824 aa22.22■■□□□ 1.15
DDX39A-214ENST00000590556 ADD1P35611 737 aaKnown RBP22.22■■□□□ 1.15
DDX39A-214ENST00000590556 CCT2P78371 535 aaKnown RBP22.22■■□□□ 1.15
DDX39A-214ENST00000590556 CCDC82Q8N4S0 544 aa22.22■■□□□ 1.15
DDX39A-214ENST00000590556 IL27Q8NEV9 243 aa22.22■■□□□ 1.15
DDX39A-214ENST00000590556 MROH8Q9H579 483 aa22.22■■□□□ 1.15
DDX39A-214ENST00000590556 PNMA2Q9UL42 364 aa22.22■■□□□ 1.15
DDX39A-214ENST00000590556 CCPG1Q9ULG6 757 aa22.22■■□□□ 1.15
DDX39A-214ENST00000590556 TPCN1Q9ULQ1 816 aa22.22■■□□□ 1.15
DDX39A-214ENST00000590556 NID2Q14112 1375 aa22.22■■□□□ 1.15
DDX39A-214ENST00000590556 CAP1Q01518 475 aa22.21■■□□□ 1.15
DDX39A-214ENST00000590556 STK3Q13188 491 aa22.21■■□□□ 1.15
DDX39A-214ENST00000590556 QRICH1Q2TAL8 776 aa22.21■■□□□ 1.15
DDX39A-214ENST00000590556 PLEKHH3Q7Z736 793 aa22.21■■□□□ 1.15
DDX39A-214ENST00000590556 HOMER1Q86YM7 354 aa22.21■■□□□ 1.15
DDX39A-214ENST00000590556 PIBF1Q8WXW3 757 aa22.21■■□□□ 1.15
DDX39A-214ENST00000590556 COA7Q96BR5 231 aa22.21■■□□□ 1.15
DDX39A-214ENST00000590556 MTMR8Q96EF0 704 aa22.21■■□□□ 1.15
DDX39A-214ENST00000590556 RRP36Q96EU6 259 aaKnown RBP22.21■■□□□ 1.15
DDX39A-214ENST00000590556 PIGSQ96S52 555 aa22.21■■□□□ 1.15
DDX39A-214ENST00000590556 RIPK3Q9Y572 518 aa22.21■■□□□ 1.15
DDX39A-214ENST00000590556 ZSWIM8A7E2V4 1837 aa22.21■■□□□ 1.15
DDX39A-214ENST00000590556 MYH6P13533 1939 aa22.21■■□□□ 1.15
DDX39A-214ENST00000590556 ZBTB5O15062 677 aa22.2■■□□□ 1.14
DDX39A-214ENST00000590556 ST18O60284 1047 aa22.2■■□□□ 1.14
DDX39A-214ENST00000590556 GNRH1P01148 92 aa22.2■■□□□ 1.14
DDX39A-214ENST00000590556 ALAS1P13196 640 aa22.2■■□□□ 1.14
DDX39A-214ENST00000590556 TKFCQ3LXA3 575 aa22.2■■□□□ 1.14
DDX39A-214ENST00000590556 GPR142Q7Z601 462 aa22.2■■□□□ 1.14
DDX39A-214ENST00000590556 SLKQ9H2G2 1235 aaPredicted RBP22.2■■□□□ 1.14
DDX39A-214ENST00000590556 NCOA5Q9HCD5 579 aaKnown RBP22.2■■□□□ 1.14
DDX39A-214ENST00000590556 HOMER2Q9NSB8 354 aa22.2■■□□□ 1.14
DDX39A-214ENST00000590556 PNMA6FA0A0J9YX94 578 aa22.19■■□□□ 1.14
DDX39A-214ENST00000590556 HOXD10P28358 340 aa22.19■■□□□ 1.14
DDX39A-214ENST00000590556 FBXO11Q86XK2 927 aa22.19■■□□□ 1.14
DDX39A-214ENST00000590556 CHST13Q8NET6 341 aa22.19■■□□□ 1.14
DDX39A-214ENST00000590556 TRERF1Q96PN7 1200 aa22.19■■□□□ 1.14
DDX39A-214ENST00000590556 SEC63Q9UGP8 760 aaKnown RBP22.19■■□□□ 1.14
DDX39A-214ENST00000590556 LIMCH1Q9UPQ0 1083 aa22.19■■□□□ 1.14
DDX39A-214ENST00000590556 TRIM17Q9Y577 477 aa22.19■■□□□ 1.14
DDX39A-214ENST00000590556 IVNS1ABPQ9Y6Y0 642 aa22.19■■□□□ 1.14
DDX39A-214ENST00000590556 DOCK3Q8IZD9 2030 aa22.19■■□□□ 1.14
DDX39A-214ENST00000590556 SMCHD1A6NHR9 2005 aa22.18■■□□□ 1.14
DDX39A-214ENST00000590556 PFKFB2O60825 505 aa22.18■■□□□ 1.14
DDX39A-214ENST00000590556 TAL1P17542 331 aaPredicted RBP22.18■■□□□ 1.14
DDX39A-214ENST00000590556 FUT2Q10981 343 aa22.18■■□□□ 1.14
DDX39A-214ENST00000590556 USH1GQ495M9 461 aa22.18■■□□□ 1.14
DDX39A-214ENST00000590556 OTOP1Q7RTM1 612 aa22.18■■□□□ 1.14
DDX39A-214ENST00000590556 CTU1Q7Z7A3 348 aaKnown RBP22.18■■□□□ 1.14
DDX39A-214ENST00000590556 AMNQ9BXJ7 453 aa22.18■■□□□ 1.14
DDX39A-214ENST00000590556 RNF146Q9NTX7 359 aa22.18■■□□□ 1.14
DDX39A-214ENST00000590556 FBXO40Q9UH90 709 aa22.18■■□□□ 1.14
DDX39A-214ENST00000590556 CNTNAP5Q8WYK1 1306 aa22.17■■□□□ 1.14
DDX39A-214ENST00000590556 CPLX1O14810 134 aa22.17■■□□□ 1.14
DDX39A-214ENST00000590556 STRNO43815 780 aa22.17■■□□□ 1.14
DDX39A-214ENST00000590556 PTPREP23469 700 aa22.17■■□□□ 1.14
DDX39A-214ENST00000590556 TRAF1Q13077 416 aa22.17■■□□□ 1.14
DDX39A-214ENST00000590556 ME3Q16798 604 aa22.17■■□□□ 1.14
DDX39A-214ENST00000590556 ACAD9Q9H845 621 aa22.17■■□□□ 1.14
DDX39A-214ENST00000590556 hCG_1642624A0A1W2PR95 340 aa22.16■■□□□ 1.14
DDX39A-214ENST00000590556 SLC15A5A6NIM6 579 aa22.16■■□□□ 1.14
DDX39A-214ENST00000590556 PPP1R11O60927 126 aaPredicted RBP22.16■■□□□ 1.14
DDX39A-214ENST00000590556 FCER1AP12319 257 aa22.16■■□□□ 1.14
DDX39A-214ENST00000590556 SCRN1Q12765 414 aa22.16■■□□□ 1.14
DDX39A-214ENST00000590556 KCTD2Q14681 263 aa22.16■■□□□ 1.14
DDX39A-214ENST00000590556 CPLX2Q6PUV4 134 aaKnown RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms