RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 SLC45A1Q9Y2W3 748 aa17.5■□□□□ 0.39
DDX39A-211ENST00000590239 WDR33Q9C0J8 1336 aaKnown RBP17.49■□□□□ 0.39
DDX39A-211ENST00000590239 MYH6P13533 1939 aa17.49■□□□□ 0.39
DDX39A-211ENST00000590239 CCL15-CCL14A0A0B4J2E2 113 aa17.49■□□□□ 0.39
DDX39A-211ENST00000590239 TESPA1A2RU30 521 aaPredicted RBP17.49■□□□□ 0.39
DDX39A-211ENST00000590239 MANSC4A6NHS7 340 aaPredicted RBP17.49■□□□□ 0.39
DDX39A-211ENST00000590239 H3BQV1 296 aa17.49■□□□□ 0.39
DDX39A-211ENST00000590239 CCL15Q16663 113 aa17.49■□□□□ 0.39
DDX39A-211ENST00000590239 WWC2Q6AWC2 1192 aa17.49■□□□□ 0.39
DDX39A-211ENST00000590239 HEATR3Q7Z4Q2 680 aa17.49■□□□□ 0.39
DDX39A-211ENST00000590239 ANKRD23Q86SG2 305 aa17.49■□□□□ 0.39
DDX39A-211ENST00000590239 CCDC12Q8WUD4 166 aaPredicted RBP17.49■□□□□ 0.39
DDX39A-211ENST00000590239 BRI3BPQ8WY22 251 aa17.49■□□□□ 0.39
DDX39A-211ENST00000590239 AMNQ9BXJ7 453 aa17.49■□□□□ 0.39
DDX39A-211ENST00000590239 SLC38A10Q9HBR0 1119 aa17.49■□□□□ 0.39
DDX39A-211ENST00000590239 FAM155AB1AL88 458 aaPredicted RBP17.48■□□□□ 0.39
DDX39A-211ENST00000590239 STXBP3O00186 592 aa17.48■□□□□ 0.39
DDX39A-211ENST00000590239 VWA5AO00534 786 aa17.48■□□□□ 0.39
DDX39A-211ENST00000590239 PPP1R11O60927 126 aaPredicted RBP17.48■□□□□ 0.39
DDX39A-211ENST00000590239 ZBED4O75132 1171 aa17.48■□□□□ 0.39
DDX39A-211ENST00000590239 OSBPP22059 807 aa17.48■□□□□ 0.39
DDX39A-211ENST00000590239 IRX3P78415 501 aaPredicted RBP17.48■□□□□ 0.39
DDX39A-211ENST00000590239 MKRN3Q13064 507 aaKnown RBP17.48■□□□□ 0.39
DDX39A-211ENST00000590239 PPP1R18Q6NYC8 613 aa17.48■□□□□ 0.39
DDX39A-211ENST00000590239 FBXO11Q86XK2 927 aa17.48■□□□□ 0.39
DDX39A-211ENST00000590239 CCDC148Q8NFR7 591 aa17.48■□□□□ 0.39
DDX39A-211ENST00000590239 MTMR6Q9Y217 621 aa17.48■□□□□ 0.39
DDX39A-211ENST00000590239 PARP14Q460N5 1801 aa17.47■□□□□ 0.39
DDX39A-211ENST00000590239 RLFQ13129 1914 aa17.47■□□□□ 0.39
DDX39A-211ENST00000590239 OAZ1P54368 228 aa17.47■□□□□ 0.39
DDX39A-211ENST00000590239 INHBEP58166 350 aa17.47■□□□□ 0.39
DDX39A-211ENST00000590239 SNAP25P60880 206 aa17.47■□□□□ 0.39
DDX39A-211ENST00000590239 KRT40Q6A162 431 aa17.47■□□□□ 0.39
DDX39A-211ENST00000590239 GALNT17Q6IS24 598 aa17.47■□□□□ 0.39
DDX39A-211ENST00000590239 LBX2Q6XYB7 198 aa17.47■□□□□ 0.39
DDX39A-211ENST00000590239 MB21D1Q8N884 522 aa17.47■□□□□ 0.39
DDX39A-211ENST00000590239 GPKOWQ92917 476 aaPredicted RBP eCLIP17.47■□□□□ 0.398e-6■■□□□ 13.6
DDX39A-211ENST00000590239 ATG4CQ96DT6 458 aa17.47■□□□□ 0.39
DDX39A-211ENST00000590239 ASCC2Q9H1I8 757 aaPredicted RBP17.47■□□□□ 0.39
DDX39A-211ENST00000590239 ZCCHC17Q9NP64 241 aaKnown RBP17.47■□□□□ 0.39
DDX39A-211ENST00000590239 VPS54Q9P1Q0 977 aa17.47■□□□□ 0.39
DDX39A-211ENST00000590239 PNMA3Q9UL41 463 aa17.47■□□□□ 0.39
DDX39A-211ENST00000590239 CTDP1Q9Y5B0 961 aaPredicted RBP17.47■□□□□ 0.39
DDX39A-211ENST00000590239 ESYT2A0FGR8 921 aa17.46■□□□□ 0.39
DDX39A-211ENST00000590239 VPS37CA5D8V6 355 aaPredicted RBP17.46■□□□□ 0.39
DDX39A-211ENST00000590239 RASSF10A6NK89 507 aa17.46■□□□□ 0.39
DDX39A-211ENST00000590239 SPDYE16A6NNV3 312 aaPredicted RBP17.46■□□□□ 0.39
DDX39A-211ENST00000590239 BTBD19C9JJ37 291 aa17.46■□□□□ 0.39
DDX39A-211ENST00000590239 BRD1O95696 1058 aa17.46■□□□□ 0.39
DDX39A-211ENST00000590239 ICAM1P05362 532 aa17.46■□□□□ 0.39
DDX39A-211ENST00000590239 ZSCAN22P10073 491 aaPredicted RBP17.46■□□□□ 0.39
DDX39A-211ENST00000590239 CALML3P27482 149 aa17.46■□□□□ 0.39
DDX39A-211ENST00000590239 FOSBP53539 338 aa17.46■□□□□ 0.39
DDX39A-211ENST00000590239 NAPAP54920 295 aa17.46■□□□□ 0.39
DDX39A-211ENST00000590239 SAMD1Q6SPF0 538 aaPredicted RBP17.46■□□□□ 0.39
DDX39A-211ENST00000590239 PHF20Q9BVI0 1012 aa17.46■□□□□ 0.39
DDX39A-211ENST00000590239 GJB4Q9NTQ9 266 aa17.46■□□□□ 0.39
DDX39A-211ENST00000590239 PCDHA1Q9Y5I3 950 aa17.46■□□□□ 0.39
DDX39A-211ENST00000590239 PDHXO00330 501 aa17.45■□□□□ 0.38
DDX39A-211ENST00000590239 ATP2A1O14983 1001 aa17.45■□□□□ 0.38
DDX39A-211ENST00000590239 MMP1P03956 469 aa17.45■□□□□ 0.38
DDX39A-211ENST00000590239 NLRP5P59047 1200 aa17.45■□□□□ 0.38
DDX39A-211ENST00000590239 GUCY1B3Q02153 619 aa17.45■□□□□ 0.38
DDX39A-211ENST00000590239 PKP1Q13835 747 aa17.45■□□□□ 0.38
DDX39A-211ENST00000590239 SAFBQ15424 915 aaKnown RBP eCLIP17.45■□□□□ 0.38
DDX39A-211ENST00000590239 DEFB115Q30KQ5 88 aa17.45■□□□□ 0.38
DDX39A-211ENST00000590239 OTUD7BQ6GQQ9 843 aa17.45■□□□□ 0.38
DDX39A-211ENST00000590239 TYW1BQ6NUM6 668 aa17.45■□□□□ 0.38
DDX39A-211ENST00000590239 CCDC174Q6PII3 467 aa17.45■□□□□ 0.38
DDX39A-211ENST00000590239 TEX2Q8IWB9 1127 aa17.45■□□□□ 0.38
DDX39A-211ENST00000590239 REPS2Q8NFH8 660 aa17.45■□□□□ 0.38
DDX39A-211ENST00000590239 GTF3C2Q8WUA4 911 aaPredicted RBP17.45■□□□□ 0.38
DDX39A-211ENST00000590239 COA7Q96BR5 231 aa17.45■□□□□ 0.38
DDX39A-211ENST00000590239 SHISA4Q96DD7 197 aa17.45■□□□□ 0.38
DDX39A-211ENST00000590239 P2RX7Q99572 595 aaKnown RBP17.45■□□□□ 0.38
DDX39A-211ENST00000590239 ZMYND12Q9H0C1 365 aa17.45■□□□□ 0.38
DDX39A-211ENST00000590239 ZDHHC9Q9Y397 364 aa17.45■□□□□ 0.38
DDX39A-211ENST00000590239 ZNF536O15090 1300 aa17.45■□□□□ 0.38
DDX39A-211ENST00000590239 HERVK_113P62684 666 aa17.44■□□□□ 0.38
DDX39A-211ENST00000590239 SREBF2Q12772 1141 aa17.44■□□□□ 0.38
DDX39A-211ENST00000590239 DAGLBQ8NCG7 672 aa17.44■□□□□ 0.38
DDX39A-211ENST00000590239 PTPN18Q99952 460 aa17.44■□□□□ 0.38
DDX39A-211ENST00000590239 GLT8D2Q9H1C3 349 aa17.44■□□□□ 0.38
DDX39A-211ENST00000590239 BRMS1Q9HCU9 246 aa17.44■□□□□ 0.38
DDX39A-211ENST00000590239 C6orf50Q9HD87 102 aa17.44■□□□□ 0.38
DDX39A-211ENST00000590239 KCNJ14Q9UNX9 436 aa17.44■□□□□ 0.38
DDX39A-211ENST00000590239 ABCB11O95342 1321 aa17.44■□□□□ 0.38
DDX39A-211ENST00000590239 GNA11P29992 359 aa17.43■□□□□ 0.38
DDX39A-211ENST00000590239 NOGQ13253 232 aa17.43■□□□□ 0.38
DDX39A-211ENST00000590239 FAM43AQ8N2R8 423 aa17.43■□□□□ 0.38
DDX39A-211ENST00000590239 BICD2Q8TD16 824 aa17.43■□□□□ 0.38
DDX39A-211ENST00000590239 ZNF214Q9UL59 606 aaPredicted RBP17.43■□□□□ 0.38
DDX39A-211ENST00000590239 CCPG1Q9ULG6 757 aa17.43■□□□□ 0.38
DDX39A-211ENST00000590239 PCDHA4Q9UN74 947 aa17.43■□□□□ 0.38
DDX39A-211ENST00000590239 MRPL11Q9Y3B7 192 aaKnown RBP17.43■□□□□ 0.38
DDX39A-211ENST00000590239 A0A0G2JMZ2 1700 aa17.42■□□□□ 0.38
DDX39A-211ENST00000590239 SMCO2A6NFE2 343 aa17.42■□□□□ 0.38
DDX39A-211ENST00000590239 KRT2P35908 639 aa17.42■□□□□ 0.38
DDX39A-211ENST00000590239 ADCY7P51828 1080 aa17.42■□□□□ 0.38
DDX39A-211ENST00000590239 MRPL12P52815 198 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms