RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 MKL1Q969V6 931 aa16.27■□□□□ 0.2
HDAC5-208ENST00000588419 ACAD9Q9H845 621 aa16.27■□□□□ 0.2
HDAC5-208ENST00000588419 TOMM22Q9NS69 142 aa16.27■□□□□ 0.2
HDAC5-208ENST00000588419 FBXO40Q9UH90 709 aa16.27■□□□□ 0.2
HDAC5-208ENST00000588419 GBF1Q92538 1859 aa16.27■□□□□ 0.19
HDAC5-208ENST00000588419 POTEB2H3BUK9 544 aa16.26■□□□□ 0.19
HDAC5-208ENST00000588419 ATP2A1O14983 1001 aa16.26■□□□□ 0.19
HDAC5-208ENST00000588419 NMT2O60551 498 aa16.26■□□□□ 0.19
HDAC5-208ENST00000588419 ALAS1P13196 640 aa16.26■□□□□ 0.19
HDAC5-208ENST00000588419 MCCP23508 829 aa16.26■□□□□ 0.19
HDAC5-208ENST00000588419 CNTN2Q02246 1040 aa16.26■□□□□ 0.19
HDAC5-208ENST00000588419 CCDC96Q2M329 555 aa16.26■□□□□ 0.19
HDAC5-208ENST00000588419 ANKRD45Q5TZF3 282 aa16.26■□□□□ 0.19
HDAC5-208ENST00000588419 NOL8Q76FK4 1167 aaKnown RBP16.26■□□□□ 0.19
HDAC5-208ENST00000588419 SPC25Q9HBM1 224 aa16.26■□□□□ 0.19
HDAC5-208ENST00000588419 INCENPQ9NQS7 918 aa16.26■□□□□ 0.19
HDAC5-208ENST00000588419 RNF146Q9NTX7 359 aa16.26■□□□□ 0.19
HDAC5-208ENST00000588419 MYH6P13533 1939 aa16.25■□□□□ 0.19
HDAC5-208ENST00000588419 MOXD2PA6NHM9 499 aa16.25■□□□□ 0.19
HDAC5-208ENST00000588419 DCDC2CA8MYV0 355 aa16.25■□□□□ 0.19
HDAC5-208ENST00000588419 ADCY6O43306 1168 aa16.25■□□□□ 0.19
HDAC5-208ENST00000588419 RANBP6O60518 1105 aaKnown RBP16.25■□□□□ 0.19
HDAC5-208ENST00000588419 OAZ1P54368 228 aa16.25■□□□□ 0.19
HDAC5-208ENST00000588419 RRP1P56182 461 aaKnown RBP16.25■□□□□ 0.19
HDAC5-208ENST00000588419 FPGSQ05932 587 aa16.25■□□□□ 0.19
HDAC5-208ENST00000588419 CCDC144BQ3MJ40 725 aa16.25■□□□□ 0.19
HDAC5-208ENST00000588419 MAMDC4Q6UXC1 1216 aa16.25■□□□□ 0.19
HDAC5-208ENST00000588419 ZNF467Q7Z7K2 595 aaPredicted RBP16.25■□□□□ 0.19
HDAC5-208ENST00000588419 FAM160B2Q86V87 743 aa16.25■□□□□ 0.19
HDAC5-208ENST00000588419 CCDC144CPQ8IYA2 1237 aa16.25■□□□□ 0.19
HDAC5-208ENST00000588419 FGD4Q96M96 766 aa16.25■□□□□ 0.19
HDAC5-208ENST00000588419 AGBL1Q96MI9 1066 aa16.25■□□□□ 0.19
HDAC5-208ENST00000588419 GLT1D1Q96MS3 346 aa16.25■□□□□ 0.19
HDAC5-208ENST00000588419 CRBNQ96SW2 442 aa16.25■□□□□ 0.19
HDAC5-208ENST00000588419 TSEN34Q9BSV6 310 aaKnown RBP16.25■□□□□ 0.19
HDAC5-208ENST00000588419 DUSP11O75319 330 aaKnown RBP16.24■□□□□ 0.19
HDAC5-208ENST00000588419 ASGR1P07306 291 aa16.24■□□□□ 0.19
HDAC5-208ENST00000588419 EPHB4P54760 987 aa16.24■□□□□ 0.19
HDAC5-208ENST00000588419 RRP12Q5JTH9 1297 aaKnown RBP16.24■□□□□ 0.19
HDAC5-208ENST00000588419 VPS53Q5VIR6 699 aa16.24■□□□□ 0.19
HDAC5-208ENST00000588419 FAM109BQ6ICB4 259 aaPredicted RBP16.24■□□□□ 0.19
HDAC5-208ENST00000588419 KLHDC9Q8NEP7 349 aa16.24■□□□□ 0.19
HDAC5-208ENST00000588419 CHURC1Q8WUH1 139 aa16.24■□□□□ 0.19
HDAC5-208ENST00000588419 ABHD16BQ9H3Z7 469 aa16.24■□□□□ 0.19
HDAC5-208ENST00000588419 A1CFQ9NQ94 594 aaKnown RBP16.24■□□□□ 0.19
HDAC5-208ENST00000588419 SYNPO2Q9UMS6 1093 aa16.24■□□□□ 0.19
HDAC5-208ENST00000588419 KIAA0355O15063 1070 aa16.23■□□□□ 0.19
HDAC5-208ENST00000588419 BEX3Q00994 111 aa16.23■□□□□ 0.19
HDAC5-208ENST00000588419 FAAP100Q0VG06 881 aa16.23■□□□□ 0.19
HDAC5-208ENST00000588419 PCSK9Q8NBP7 692 aaKnown RBP16.23■□□□□ 0.19
HDAC5-208ENST00000588419 STAG1Q8WVM7 1258 aa16.23■□□□□ 0.19
HDAC5-208ENST00000588419 MYLIPQ8WY64 445 aa16.23■□□□□ 0.19
HDAC5-208ENST00000588419 GMCL1Q96IK5 515 aa16.23■□□□□ 0.19
HDAC5-208ENST00000588419 TRERF1Q96PN7 1200 aa16.23■□□□□ 0.19
HDAC5-208ENST00000588419 CDX2Q99626 313 aaPredicted RBP16.23■□□□□ 0.19
HDAC5-208ENST00000588419 PPP1R12CQ9BZL4 782 aa16.23■□□□□ 0.19
HDAC5-208ENST00000588419 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.23■□□□□ 0.19
HDAC5-208ENST00000588419 DDX49Q9Y6V7 483 aaKnown RBP16.23■□□□□ 0.19
HDAC5-208ENST00000588419 LAMA4Q16363 1823 aa16.23■□□□□ 0.19
HDAC5-208ENST00000588419 MROH7Q68CQ1 1323 aa16.22■□□□□ 0.19
HDAC5-208ENST00000588419 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.22■□□□□ 0.19
HDAC5-208ENST00000588419 FOXP2O15409 715 aa16.22■□□□□ 0.19
HDAC5-208ENST00000588419 SMAD3P84022 425 aaKnown RBP16.22■□□□□ 0.19
HDAC5-208ENST00000588419 GNASQ5JWF2 1037 aa16.22■□□□□ 0.19
HDAC5-208ENST00000588419 PPP4R3BQ5MIZ7 849 aa16.22■□□□□ 0.19
HDAC5-208ENST00000588419 NSMFQ6X4W1 530 aa16.22■□□□□ 0.19
HDAC5-208ENST00000588419 EEPD1Q7L9B9 569 aa16.22■□□□□ 0.19
HDAC5-208ENST00000588419 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.22■□□□□ 0.19
HDAC5-208ENST00000588419 CCPG1Q9ULG6 757 aa16.22■□□□□ 0.19
HDAC5-208ENST00000588419 LAMA2P24043 3122 aaKnown RBP16.22■□□□□ 0.19
HDAC5-208ENST00000588419 ZNF536O15090 1300 aa16.21■□□□□ 0.19
HDAC5-208ENST00000588419 FRMPD2Q68DX3 1309 aaPredicted RBP16.21■□□□□ 0.19
HDAC5-208ENST00000588419 A0A0U1RQG5 324 aaPredicted RBP16.21■□□□□ 0.19
HDAC5-208ENST00000588419 FDX1P10109 184 aa16.21■□□□□ 0.19
HDAC5-208ENST00000588419 PTGS1P23219 599 aa16.21■□□□□ 0.19
HDAC5-208ENST00000588419 CST5P28325 142 aaPredicted RBP16.21■□□□□ 0.19
HDAC5-208ENST00000588419 GJA9P57773 515 aa16.21■□□□□ 0.19
HDAC5-208ENST00000588419 TNFAIP2Q03169 654 aa16.21■□□□□ 0.19
HDAC5-208ENST00000588419 MUM1L1Q5H9M0 696 aa16.21■□□□□ 0.19
HDAC5-208ENST00000588419 CCSAPQ6IQ19 270 aaPredicted RBP16.21■□□□□ 0.19
HDAC5-208ENST00000588419 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.21■□□□□ 0.19
HDAC5-208ENST00000588419 ANKRD33Q7Z3H0 272 aa16.21■□□□□ 0.19
HDAC5-208ENST00000588419 FBXO16Q8IX29 292 aaPredicted RBP16.21■□□□□ 0.19
HDAC5-208ENST00000588419 EVI5LQ96CN4 794 aa16.21■□□□□ 0.19
HDAC5-208ENST00000588419 SEMA6BQ9H3T3 888 aa16.21■□□□□ 0.19
HDAC5-208ENST00000588419 IL17RBQ9NRM6 502 aa16.21■□□□□ 0.19
HDAC5-208ENST00000588419 PRR12Q9ULL5 1215 aa16.21■□□□□ 0.19
HDAC5-208ENST00000588419 SALL3Q9BXA9 1300 aa16.2■□□□□ 0.18
HDAC5-208ENST00000588419 SOWAHBA6NEL2 793 aa16.2■□□□□ 0.18
HDAC5-208ENST00000588419 TLR3O15455 904 aaKnown RBP16.2■□□□□ 0.18
HDAC5-208ENST00000588419 FOSL2P15408 326 aa16.2■□□□□ 0.18
HDAC5-208ENST00000588419 SLC16A2P36021 539 aa16.2■□□□□ 0.18
HDAC5-208ENST00000588419 HAND2P61296 217 aa16.2■□□□□ 0.18
HDAC5-208ENST00000588419 TKFCQ3LXA3 575 aa16.2■□□□□ 0.18
HDAC5-208ENST00000588419 RCSD1Q6JBY9 416 aa16.2■□□□□ 0.18
HDAC5-208ENST00000588419 TLK2Q86UE8 772 aa16.2■□□□□ 0.18
HDAC5-208ENST00000588419 FAM133AQ8N9E0 248 aa16.2■□□□□ 0.18
HDAC5-208ENST00000588419 MAFAQ8NHW3 353 aaPredicted RBP16.2■□□□□ 0.18
HDAC5-208ENST00000588419 FAM227BQ96M60 508 aa16.2■□□□□ 0.18
HDAC5-208ENST00000588419 TOX2Q96NM4 488 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms