RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 SKAP1Q86WV1 359 aa23.98■■□□□ 1.43
SS18-224ENST00000584083 CCDC136Q96JN2 1154 aa23.98■■□□□ 1.43
SS18-224ENST00000584083 UBAC1Q9BSL1 405 aa23.98■■□□□ 1.43
SS18-224ENST00000584083 C11orf49Q9H6J7 331 aa23.98■■□□□ 1.43
SS18-224ENST00000584083 RNF146Q9NTX7 359 aa23.98■■□□□ 1.43
SS18-224ENST00000584083 ZNF536O15090 1300 aa23.98■■□□□ 1.43
SS18-224ENST00000584083 DNAJC25-GNG10A0A024R161 153 aa23.97■■□□□ 1.43
SS18-224ENST00000584083 H0YGN5 161 aa23.97■■□□□ 1.43
SS18-224ENST00000584083 ZNF543Q08ER8 600 aa23.97■■□□□ 1.43
SS18-224ENST00000584083 TRDNQ13061 729 aa23.97■■□□□ 1.43
SS18-224ENST00000584083 TKFCQ3LXA3 575 aa23.97■■□□□ 1.43
SS18-224ENST00000584083 BTNL9Q6UXG8 535 aa23.97■■□□□ 1.43
SS18-224ENST00000584083 TRERF1Q96PN7 1200 aa23.97■■□□□ 1.43
SS18-224ENST00000584083 ACAD9Q9H845 621 aa23.97■■□□□ 1.43
SS18-224ENST00000584083 KAT14Q9H8E8 782 aa23.97■■□□□ 1.43
SS18-224ENST00000584083 NR2E3Q9Y5X4 410 aa23.97■■□□□ 1.43
SS18-224ENST00000584083 SEPT4O43236 478 aa23.96■■□□□ 1.43
SS18-224ENST00000584083 EVI5O60447 810 aa23.96■■□□□ 1.43
SS18-224ENST00000584083 ANO1Q5XXA6 986 aa23.96■■□□□ 1.43
SS18-224ENST00000584083 KIAA1211Q6ZU35 1233 aa23.96■■□□□ 1.43
SS18-224ENST00000584083 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.96■■□□□ 1.43
SS18-224ENST00000584083 ENAHQ8N8S7 591 aaPredicted RBP23.96■■□□□ 1.43
SS18-224ENST00000584083 PNMA1Q8ND90 353 aa23.96■■□□□ 1.43
SS18-224ENST00000584083 CCPG1Q9ULG6 757 aa23.96■■□□□ 1.43
SS18-224ENST00000584083 CEP290O15078 2479 aa23.95■■□□□ 1.43
SS18-224ENST00000584083 TNKSO95271 1327 aa23.95■■□□□ 1.42
SS18-224ENST00000584083 MCM3APO60318 1980 aa23.95■■□□□ 1.42
SS18-224ENST00000584083 ALPK3Q96L96 1907 aa23.95■■□□□ 1.42
SS18-224ENST00000584083 CYP21A2P08686 494 aa23.95■■□□□ 1.42
SS18-224ENST00000584083 ANKS1AQ92625 1134 aa23.95■■□□□ 1.42
SS18-224ENST00000584083 RANBP17Q9H2T7 1088 aaKnown RBP23.95■■□□□ 1.42
SS18-224ENST00000584083 NRBP1Q9UHY1 535 aa23.95■■□□□ 1.42
SS18-224ENST00000584083 NEFLP07196 543 aa23.94■■□□□ 1.42
SS18-224ENST00000584083 SNHG28P0DPA3 235 aa23.94■■□□□ 1.42
SS18-224ENST00000584083 GPATCH4Q5T3I0 446 aaKnown RBP23.94■■□□□ 1.42
SS18-224ENST00000584083 MSL3Q8N5Y2 521 aaKnown RBP23.94■■□□□ 1.42
SS18-224ENST00000584083 CNPY2Q9Y2B0 182 aa23.94■■□□□ 1.42
SS18-224ENST00000584083 POTEB2H3BUK9 544 aa23.93■■□□□ 1.42
SS18-224ENST00000584083 ICAM1P05362 532 aa23.93■■□□□ 1.42
SS18-224ENST00000584083 GOLGA8HP0CJ92 632 aa23.93■■□□□ 1.42
SS18-224ENST00000584083 BMP2KLQ5H9B9 411 aa23.93■■□□□ 1.42
SS18-224ENST00000584083 ZNF467Q7Z7K2 595 aaPredicted RBP23.93■■□□□ 1.42
SS18-224ENST00000584083 MAP4K1Q92918 833 aa23.93■■□□□ 1.42
SS18-224ENST00000584083 A1CFQ9NQ94 594 aaKnown RBP23.93■■□□□ 1.42
SS18-224ENST00000584083 MYCNP04198 464 aaPredicted RBP23.92■■□□□ 1.42
SS18-224ENST00000584083 TAL1P17542 331 aaPredicted RBP23.92■■□□□ 1.42
SS18-224ENST00000584083 MUM1L1Q5H9M0 696 aa23.92■■□□□ 1.42
SS18-224ENST00000584083 IFIT1BQ5T764 474 aaKnown RBP23.92■■□□□ 1.42
SS18-224ENST00000584083 CYB5R4Q7L1T6 521 aa23.92■■□□□ 1.42
SS18-224ENST00000584083 RALYLQ86SE5 291 aaKnown RBP23.92■■□□□ 1.42
SS18-224ENST00000584083 ARRDC4Q8NCT1 418 aa23.92■■□□□ 1.42
SS18-224ENST00000584083 ESYT1Q9BSJ8 1104 aa23.92■■□□□ 1.42
SS18-224ENST00000584083 RBM8AQ9Y5S9 174 aaKnown RBP23.92■■□□□ 1.42
SS18-224ENST00000584083 PFASO15067 1338 aa23.91■■□□□ 1.42
SS18-224ENST00000584083 SYNGAP1Q96PV0 1343 aa23.91■■□□□ 1.42
SS18-224ENST00000584083 E7EWF7 191 aa23.91■■□□□ 1.42
SS18-224ENST00000584083 CNTN2Q02246 1040 aa23.91■■□□□ 1.42
SS18-224ENST00000584083 MAMDC4Q6UXC1 1216 aa23.91■■□□□ 1.42
SS18-224ENST00000584083 DNM1LO00429 736 aa23.9■■□□□ 1.42
SS18-224ENST00000584083 SNAI1O95863 264 aaPredicted RBP23.9■■□□□ 1.42
SS18-224ENST00000584083 RARBP10826 455 aa23.9■■□□□ 1.42
SS18-224ENST00000584083 COL6A1P12109 1028 aa23.9■■□□□ 1.42
SS18-224ENST00000584083 GJC2Q5T442 439 aaPredicted RBP23.9■■□□□ 1.42
SS18-224ENST00000584083 NSMFQ6X4W1 530 aa23.9■■□□□ 1.42
SS18-224ENST00000584083 NCOA7Q8NI08 942 aa23.9■■□□□ 1.42
SS18-224ENST00000584083 UBA5Q9GZZ9 404 aa23.9■■□□□ 1.42
SS18-224ENST00000584083 ZHX1Q9UKY1 873 aaPredicted RBP23.9■■□□□ 1.42
SS18-224ENST00000584083 PNMA2Q9UL42 364 aa23.9■■□□□ 1.42
SS18-224ENST00000584083 TAF6LQ9Y6J9 622 aa23.9■■□□□ 1.42
SS18-224ENST00000584083 MYH6P13533 1939 aa23.89■■□□□ 1.42
SS18-224ENST00000584083 ZNF865P0CJ78 1059 aaPredicted RBP23.89■■□□□ 1.41
SS18-224ENST00000584083 SEC23AQ15436 765 aa23.89■■□□□ 1.41
SS18-224ENST00000584083 ASPRV1Q53RT3 343 aa23.89■■□□□ 1.41
SS18-224ENST00000584083 C7orf61Q8IZ16 206 aa23.89■■□□□ 1.41
SS18-224ENST00000584083 FAM133AQ8N9E0 248 aa23.89■■□□□ 1.41
SS18-224ENST00000584083 FGD4Q96M96 766 aa23.89■■□□□ 1.41
SS18-224ENST00000584083 SENP6Q9GZR1 1112 aaPredicted RBP23.89■■□□□ 1.41
SS18-224ENST00000584083 CPVLQ9H3G5 476 aa23.89■■□□□ 1.41
SS18-224ENST00000584083 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.89■■□□□ 1.41
SS18-224ENST00000584083 ERICH2A1L162 156 aa23.88■■□□□ 1.41
SS18-224ENST00000584083 KBTBD13C9JR72 458 aa23.88■■□□□ 1.41
SS18-224ENST00000584083 IFIT3O14879 490 aaKnown RBP23.88■■□□□ 1.41
SS18-224ENST00000584083 PARP1P09874 1014 aaKnown RBP23.88■■□□□ 1.41
SS18-224ENST00000584083 AKR1A1P14550 325 aa23.88■■□□□ 1.41
SS18-224ENST00000584083 ANO2Q9NQ90 1003 aa23.88■■□□□ 1.41
SS18-224ENST00000584083 XPNPEP3Q9NQH7 507 aa23.88■■□□□ 1.41
SS18-224ENST00000584083 CYP39A1Q9NYL5 469 aa23.88■■□□□ 1.41
SS18-224ENST00000584083 DHX16O60231 1041 aaKnown RBP23.87■■□□□ 1.41
SS18-224ENST00000584083 SART3Q15020 963 aaKnown RBP23.87■■□□□ 1.41
SS18-224ENST00000584083 STOX1Q6ZVD7 989 aa23.87■■□□□ 1.41
SS18-224ENST00000584083 ARMCX2Q7L311 632 aa23.87■■□□□ 1.41
SS18-224ENST00000584083 CCDC144CPQ8IYA2 1237 aa23.87■■□□□ 1.41
SS18-224ENST00000584083 LSG1Q9H089 658 aaKnown RBP23.87■■□□□ 1.41
SS18-224ENST00000584083 ABHD16BQ9H3Z7 469 aa23.87■■□□□ 1.41
SS18-224ENST00000584083 FAM184BQ9ULE4 1060 aa23.87■■□□□ 1.41
SS18-224ENST00000584083 SOWAHBA6NEL2 793 aa23.86■■□□□ 1.41
SS18-224ENST00000584083 ACVR2BQ13705 512 aa23.86■■□□□ 1.41
SS18-224ENST00000584083 CASC1Q6TDU7 716 aa23.86■■□□□ 1.41
SS18-224ENST00000584083 CHST3Q7LGC8 479 aa23.86■■□□□ 1.41
SS18-224ENST00000584083 WDR19Q8NEZ3 1342 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms