RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 SENP6Q9GZR1 1112 aaPredicted RBP25.25■■□□□ 1.63
PPP4R1-228ENST00000584074 RNF146Q9NTX7 359 aa25.25■■□□□ 1.63
PPP4R1-228ENST00000584074 FRMPD2Q68DX3 1309 aaPredicted RBP25.25■■□□□ 1.63
PPP4R1-228ENST00000584074 FRMPD3Q5JV73 1810 aa25.25■■□□□ 1.63
PPP4R1-228ENST00000584074 ALPK3Q96L96 1907 aa25.24■■□□□ 1.63
PPP4R1-228ENST00000584074 B4E1Z4 1266 aa25.24■■□□□ 1.63
PPP4R1-228ENST00000584074 PDHBP11177 359 aa25.24■■□□□ 1.63
PPP4R1-228ENST00000584074 ALAS1P13196 640 aa25.24■■□□□ 1.63
PPP4R1-228ENST00000584074 LRRC26Q2I0M4 334 aa25.24■■□□□ 1.63
PPP4R1-228ENST00000584074 BTNL9Q6UXG8 535 aa25.24■■□□□ 1.63
PPP4R1-228ENST00000584074 ARRDC4Q8NCT1 418 aa25.24■■□□□ 1.63
PPP4R1-228ENST00000584074 ACAD9Q9H845 621 aa25.24■■□□□ 1.63
PPP4R1-228ENST00000584074 SNAI1O95863 264 aaPredicted RBP25.23■■□□□ 1.63
PPP4R1-228ENST00000584074 MYCNP04198 464 aaPredicted RBP25.23■■□□□ 1.63
PPP4R1-228ENST00000584074 ZNF865P0CJ78 1059 aaPredicted RBP25.23■■□□□ 1.63
PPP4R1-228ENST00000584074 SYDE2Q5VT97 1194 aa25.23■■□□□ 1.63
PPP4R1-228ENST00000584074 MAMDC4Q6UXC1 1216 aa25.23■■□□□ 1.63
PPP4R1-228ENST00000584074 MSL3Q8N5Y2 521 aaKnown RBP25.23■■□□□ 1.63
PPP4R1-228ENST00000584074 FGD4Q96M96 766 aa25.23■■□□□ 1.63
PPP4R1-228ENST00000584074 TRERF1Q96PN7 1200 aa25.23■■□□□ 1.63
PPP4R1-228ENST00000584074 RBM27Q9P2N5 1060 aaKnown RBP25.23■■□□□ 1.63
PPP4R1-228ENST00000584074 ZMYND8Q9ULU4 1186 aaPredicted RBP25.23■■□□□ 1.63
PPP4R1-228ENST00000584074 CNPY2Q9Y2B0 182 aa25.23■■□□□ 1.63
PPP4R1-228ENST00000584074 RAD50Q92878 1312 aa25.22■■□□□ 1.63
PPP4R1-228ENST00000584074 SYNGAP1Q96PV0 1343 aa25.22■■□□□ 1.63
PPP4R1-228ENST00000584074 LAMA4Q16363 1823 aa25.22■■□□□ 1.63
PPP4R1-228ENST00000584074 TKFCQ3LXA3 575 aa25.22■■□□□ 1.63
PPP4R1-228ENST00000584074 ZNF467Q7Z7K2 595 aaPredicted RBP25.22■■□□□ 1.63
PPP4R1-228ENST00000584074 RANBP17Q9H2T7 1088 aaKnown RBP25.22■■□□□ 1.63
PPP4R1-228ENST00000584074 A1CFQ9NQ94 594 aaKnown RBP25.22■■□□□ 1.63
PPP4R1-228ENST00000584074 ZSWIM5Q9P217 1185 aa25.22■■□□□ 1.63
PPP4R1-228ENST00000584074 PLXNA1Q9UIW2 1896 aa25.21■■□□□ 1.63
PPP4R1-228ENST00000584074 SNHG28P0DPA3 235 aa25.21■■□□□ 1.63
PPP4R1-228ENST00000584074 CNTN2Q02246 1040 aa25.21■■□□□ 1.63
PPP4R1-228ENST00000584074 ZNF543Q08ER8 600 aa25.21■■□□□ 1.63
PPP4R1-228ENST00000584074 MUM1L1Q5H9M0 696 aa25.21■■□□□ 1.63
PPP4R1-228ENST00000584074 IQCA1Q86XH1 822 aa25.21■■□□□ 1.63
PPP4R1-228ENST00000584074 DGKHQ86XP1 1220 aa25.21■■□□□ 1.63
PPP4R1-228ENST00000584074 RUFY2Q8WXA3 655 aa25.21■■□□□ 1.63
PPP4R1-228ENST00000584074 PRO3102Q9H379 93 aa25.21■■□□□ 1.63
PPP4R1-228ENST00000584074 CCPG1Q9ULG6 757 aa25.21■■□□□ 1.63
PPP4R1-228ENST00000584074 KBTBD13C9JR72 458 aa25.2■■□□□ 1.62
PPP4R1-228ENST00000584074 ICAM1P05362 532 aa25.2■■□□□ 1.62
PPP4R1-228ENST00000584074 RARBP10826 455 aa25.2■■□□□ 1.62
PPP4R1-228ENST00000584074 SYN1P17600 705 aa25.2■■□□□ 1.62
PPP4R1-228ENST00000584074 NT5C2P49902 561 aa25.2■■□□□ 1.62
PPP4R1-228ENST00000584074 ATN1P54259 1190 aaPredicted RBP25.2■■□□□ 1.62
PPP4R1-228ENST00000584074 PTH1RQ03431 593 aa25.2■■□□□ 1.62
PPP4R1-228ENST00000584074 LENG1Q96BZ8 264 aaPredicted RBP25.2■■□□□ 1.62
PPP4R1-228ENST00000584074 ZSCAN10Q96SZ4 725 aaPredicted RBP25.2■■□□□ 1.62
PPP4R1-228ENST00000584074 XPNPEP3Q9NQH7 507 aa25.2■■□□□ 1.62
PPP4R1-228ENST00000584074 POTEB2H3BUK9 544 aa25.19■■□□□ 1.62
PPP4R1-228ENST00000584074 LRRC41Q15345 812 aa25.19■■□□□ 1.62
PPP4R1-228ENST00000584074 FAM133AQ8N9E0 248 aa25.19■■□□□ 1.62
PPP4R1-228ENST00000584074 KRT23Q9C075 422 aa25.19■■□□□ 1.62
PPP4R1-228ENST00000584074 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.19■■□□□ 1.62
PPP4R1-228ENST00000584074 PCDH10Q9P2E7 1040 aa25.19■■□□□ 1.62
PPP4R1-228ENST00000584074 ZHX1Q9UKY1 873 aaPredicted RBP25.19■■□□□ 1.62
PPP4R1-228ENST00000584074 AKR1A1P14550 325 aa25.18■■□□□ 1.62
PPP4R1-228ENST00000584074 CCDC178Q5BJE1 867 aa25.18■■□□□ 1.62
PPP4R1-228ENST00000584074 ENAHQ8N8S7 591 aaPredicted RBP25.18■■□□□ 1.62
PPP4R1-228ENST00000584074 PNMA1Q8ND90 353 aa25.18■■□□□ 1.62
PPP4R1-228ENST00000584074 ANKS1AQ92625 1134 aa25.18■■□□□ 1.62
PPP4R1-228ENST00000584074 CNNM2Q9H8M5 875 aa25.18■■□□□ 1.62
PPP4R1-228ENST00000584074 SOWAHBA6NEL2 793 aa25.17■■□□□ 1.62
PPP4R1-228ENST00000584074 PGK1P00558 417 aa25.17■■□□□ 1.62
PPP4R1-228ENST00000584074 GOLGA8HP0CJ92 632 aa25.17■■□□□ 1.62
PPP4R1-228ENST00000584074 ADCYAP1R1P41586 468 aa25.17■■□□□ 1.62
PPP4R1-228ENST00000584074 ACVR2BQ13705 512 aa25.17■■□□□ 1.62
PPP4R1-228ENST00000584074 ARMCX2Q7L311 632 aa25.17■■□□□ 1.62
PPP4R1-228ENST00000584074 CCDC144CPQ8IYA2 1237 aa25.17■■□□□ 1.62
PPP4R1-228ENST00000584074 KAT14Q9H8E8 782 aa25.17■■□□□ 1.62
PPP4R1-228ENST00000584074 TNKSO95271 1327 aa25.16■■□□□ 1.62
PPP4R1-228ENST00000584074 SGSM2O43147 1006 aa25.16■■□□□ 1.62
PPP4R1-228ENST00000584074 FXR1P51114 621 aaKnown RBP eCLIP25.16■■□□□ 1.62
PPP4R1-228ENST00000584074 NSMFQ6X4W1 530 aa25.16■■□□□ 1.62
PPP4R1-228ENST00000584074 FERMT2Q96AC1 680 aa25.16■■□□□ 1.62
PPP4R1-228ENST00000584074 CPVLQ9H3G5 476 aa25.16■■□□□ 1.62
PPP4R1-228ENST00000584074 CYP39A1Q9NYL5 469 aa25.16■■□□□ 1.62
PPP4R1-228ENST00000584074 FAM184BQ9ULE4 1060 aa25.16■■□□□ 1.62
PPP4R1-228ENST00000584074 GPATCH4Q5T3I0 446 aaKnown RBP25.15■■□□□ 1.62
PPP4R1-228ENST00000584074 UBAC1Q9BSL1 405 aa25.15■■□□□ 1.62
PPP4R1-228ENST00000584074 ABHD16BQ9H3Z7 469 aa25.15■■□□□ 1.62
PPP4R1-228ENST00000584074 ASTN1O14525 1302 aa25.14■■□□□ 1.62
PPP4R1-228ENST00000584074 CYP21A2P08686 494 aa25.14■■□□□ 1.62
PPP4R1-228ENST00000584074 SLC39A5Q6ZMH5 540 aa25.14■■□□□ 1.62
PPP4R1-228ENST00000584074 CYB5R4Q7L1T6 521 aa25.14■■□□□ 1.62
PPP4R1-228ENST00000584074 RNF180Q86T96 592 aa25.14■■□□□ 1.62
PPP4R1-228ENST00000584074 SKAP1Q86WV1 359 aa25.14■■□□□ 1.62
PPP4R1-228ENST00000584074 PURBQ96QR8 312 aaKnown RBP25.14■■□□□ 1.62
PPP4R1-228ENST00000584074 GDF15Q99988 308 aa25.14■■□□□ 1.62
PPP4R1-228ENST00000584074 UBA5Q9GZZ9 404 aa25.14■■□□□ 1.62
PPP4R1-228ENST00000584074 TAF6LQ9Y6J9 622 aa25.14■■□□□ 1.62
PPP4R1-228ENST00000584074 DDX49Q9Y6V7 483 aaKnown RBP25.14■■□□□ 1.62
PPP4R1-228ENST00000584074 U3KPZ7 1027 aaPredicted RBP25.14■■□□□ 1.62
PPP4R1-228ENST00000584074 NFIBO00712 420 aa25.13■■□□□ 1.61
PPP4R1-228ENST00000584074 ADCY6O43306 1168 aa25.13■■□□□ 1.61
PPP4R1-228ENST00000584074 ADAMTS4O75173 837 aa25.13■■□□□ 1.61
PPP4R1-228ENST00000584074 RTP1P59025 263 aa25.13■■□□□ 1.61
PPP4R1-228ENST00000584074 CCDC144BQ3MJ40 725 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms