RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 U3KPZ7 1027 aaPredicted RBP11.64□□□□□ -0.55
SKA2-208ENST00000583927 BAZ2BQ9UIF8 2168 aaKnown RBP11.64□□□□□ -0.55
SKA2-208ENST00000583927 LAMA2P24043 3122 aaKnown RBP11.64□□□□□ -0.55
SKA2-208ENST00000583927 LAMA3Q16787 3333 aa11.63□□□□□ -0.55
SKA2-208ENST00000583927 KDM4AO75164 1064 aa11.63□□□□□ -0.55
SKA2-208ENST00000583927 ZNF543Q08ER8 600 aa11.63□□□□□ -0.55
SKA2-208ENST00000583927 BMP2KLQ5H9B9 411 aa11.63□□□□□ -0.55
SKA2-208ENST00000583927 CPXCR1Q8N123 301 aa11.63□□□□□ -0.55
SKA2-208ENST00000583927 MAP4K1Q92918 833 aa11.63□□□□□ -0.55
SKA2-208ENST00000583927 MAF1Q9H063 256 aa11.63□□□□□ -0.55
SKA2-208ENST00000583927 ACAD9Q9H845 621 aa11.63□□□□□ -0.55
SKA2-208ENST00000583927 RAVER2Q9HCJ3 691 aaKnown RBP11.63□□□□□ -0.55
SKA2-208ENST00000583927 ZSWIM5Q9P217 1185 aa11.63□□□□□ -0.55
SKA2-208ENST00000583927 TRIOBPQ9H2D6 2365 aa11.63□□□□□ -0.55
SKA2-208ENST00000583927 PFASO15067 1338 aa11.62□□□□□ -0.55
SKA2-208ENST00000583927 KIAA1217Q5T5P2 1943 aa11.62□□□□□ -0.55
SKA2-208ENST00000583927 SZT2Q5T011 3432 aa11.62□□□□□ -0.55
SKA2-208ENST00000583927 B4E1Z4 1266 aa11.62□□□□□ -0.55
SKA2-208ENST00000583927 ICAM1P05362 532 aa11.62□□□□□ -0.55
SKA2-208ENST00000583927 PGK2P07205 417 aa11.62□□□□□ -0.55
SKA2-208ENST00000583927 IKQ13123 557 aaPredicted RBP11.62□□□□□ -0.55
SKA2-208ENST00000583927 ENAHQ8N8S7 591 aaPredicted RBP11.62□□□□□ -0.55
SKA2-208ENST00000583927 DDX11Q96FC9 970 aa11.62□□□□□ -0.55
SKA2-208ENST00000583927 ZSCAN10Q96SZ4 725 aaPredicted RBP11.62□□□□□ -0.55
SKA2-208ENST00000583927 C11orf49Q9H6J7 331 aa11.62□□□□□ -0.55
SKA2-208ENST00000583927 NR2E3Q9Y5X4 410 aa11.62□□□□□ -0.55
SKA2-208ENST00000583927 WDR19Q8NEZ3 1342 aa11.61□□□□□ -0.55
SKA2-208ENST00000583927 LOC102724159A0A0B4J2E5 919 aa11.61□□□□□ -0.55
SKA2-208ENST00000583927 DNM1LO00429 736 aa11.61□□□□□ -0.55
SKA2-208ENST00000583927 CYP21A2P08686 494 aa11.61□□□□□ -0.55
SKA2-208ENST00000583927 PTH1RQ03431 593 aa11.61□□□□□ -0.55
SKA2-208ENST00000583927 PWP2Q15269 919 aaKnown RBP11.61□□□□□ -0.55
SKA2-208ENST00000583927 CCDC96Q2M329 555 aa11.61□□□□□ -0.55
SKA2-208ENST00000583927 SYDE2Q5VT97 1194 aa11.61□□□□□ -0.55
SKA2-208ENST00000583927 ANKRD35Q8N283 1001 aa11.61□□□□□ -0.55
SKA2-208ENST00000583927 FAM133AQ8N9E0 248 aa11.61□□□□□ -0.55
SKA2-208ENST00000583927 ARRDC4Q8NCT1 418 aa11.61□□□□□ -0.55
SKA2-208ENST00000583927 PNMA1Q8ND90 353 aa11.61□□□□□ -0.55
SKA2-208ENST00000583927 DIS3LQ8TF46 1054 aaKnown RBP11.61□□□□□ -0.55
SKA2-208ENST00000583927 DPF3Q92784 378 aa11.61□□□□□ -0.55
SKA2-208ENST00000583927 AGBL1Q96MI9 1066 aa11.61□□□□□ -0.55
SKA2-208ENST00000583927 TRERF1Q96PN7 1200 aa11.61□□□□□ -0.55
SKA2-208ENST00000583927 MTA3Q9BTC8 594 aa11.61□□□□□ -0.55
SKA2-208ENST00000583927 TNKSO95271 1327 aa11.6□□□□□ -0.55
SKA2-208ENST00000583927 ZNF865P0CJ78 1059 aaPredicted RBP11.6□□□□□ -0.55
SKA2-208ENST00000583927 CNGA1P29973 690 aa11.6□□□□□ -0.55
SKA2-208ENST00000583927 TRDNQ13061 729 aa11.6□□□□□ -0.55
SKA2-208ENST00000583927 SEC23AQ15436 765 aa11.6□□□□□ -0.55
SKA2-208ENST00000583927 ASPRV1Q53RT3 343 aa11.6□□□□□ -0.55
SKA2-208ENST00000583927 TTBK2Q6IQ55 1244 aa11.6□□□□□ -0.55
SKA2-208ENST00000583927 RASGRP2Q7LDG7 609 aa11.6□□□□□ -0.55
SKA2-208ENST00000583927 FGD4Q96M96 766 aa11.6□□□□□ -0.55
SKA2-208ENST00000583927 ZKSCAN3Q9BRR0 538 aa11.6□□□□□ -0.55
SKA2-208ENST00000583927 UBAC1Q9BSL1 405 aa11.6□□□□□ -0.55
SKA2-208ENST00000583927 ABHD16BQ9H3Z7 469 aa11.6□□□□□ -0.55
SKA2-208ENST00000583927 KAT14Q9H8E8 782 aa11.6□□□□□ -0.55
SKA2-208ENST00000583927 A1CFQ9NQ94 594 aaKnown RBP11.6□□□□□ -0.55
SKA2-208ENST00000583927 RNF146Q9NTX7 359 aa11.6□□□□□ -0.55
SKA2-208ENST00000583927 ISY1Q9ULR0 285 aaKnown RBP11.6□□□□□ -0.55
SKA2-208ENST00000583927 H0YGN5 161 aa11.59□□□□□ -0.55
SKA2-208ENST00000583927 EVI5O60447 810 aa11.59□□□□□ -0.55
SKA2-208ENST00000583927 SNAI1O95863 264 aaPredicted RBP11.59□□□□□ -0.55
SKA2-208ENST00000583927 ALAS1P13196 640 aa11.59□□□□□ -0.55
SKA2-208ENST00000583927 AKR1A1P14550 325 aa11.59□□□□□ -0.55
SKA2-208ENST00000583927 NCOA7Q8NI08 942 aa11.59□□□□□ -0.55
SKA2-208ENST00000583927 ESYT1Q9BSJ8 1104 aa11.59□□□□□ -0.55
SKA2-208ENST00000583927 CYP39A1Q9NYL5 469 aa11.59□□□□□ -0.55
SKA2-208ENST00000583927 CCPG1Q9ULG6 757 aa11.59□□□□□ -0.55
SKA2-208ENST00000583927 CNPY2Q9Y2B0 182 aa11.59□□□□□ -0.55
SKA2-208ENST00000583927 LTBP2Q14767 1821 aa11.58□□□□□ -0.56
SKA2-208ENST00000583927 ASB14A6NK59 587 aa11.58□□□□□ -0.56
SKA2-208ENST00000583927 E7EWF7 191 aa11.58□□□□□ -0.56
SKA2-208ENST00000583927 POTEB2H3BUK9 544 aa11.58□□□□□ -0.56
SKA2-208ENST00000583927 RARBP10826 455 aa11.58□□□□□ -0.56
SKA2-208ENST00000583927 SLC16A2P36021 539 aa11.58□□□□□ -0.56
SKA2-208ENST00000583927 C1QBPQ07021 282 aaKnown RBP11.58□□□□□ -0.56
SKA2-208ENST00000583927 PRAMEF19Q5SWL8 479 aa11.58□□□□□ -0.56
SKA2-208ENST00000583927 IFIT1BQ5T764 474 aaKnown RBP11.58□□□□□ -0.56
SKA2-208ENST00000583927 C1orf53Q5VUE5 145 aa11.58□□□□□ -0.56
SKA2-208ENST00000583927 KIAA1211Q6ZU35 1233 aa11.58□□□□□ -0.56
SKA2-208ENST00000583927 RGS22Q8NE09 1264 aa11.58□□□□□ -0.56
SKA2-208ENST00000583927 MORC4Q8TE76 937 aa11.58□□□□□ -0.56
SKA2-208ENST00000583927 KATNBL1Q9H079 304 aa11.58□□□□□ -0.56
SKA2-208ENST00000583927 LSG1Q9H089 658 aaKnown RBP11.58□□□□□ -0.56
SKA2-208ENST00000583927 PRO3102Q9H379 93 aa11.58□□□□□ -0.56
SKA2-208ENST00000583927 GPCPD1Q9NPB8 672 aa11.58□□□□□ -0.56
SKA2-208ENST00000583927 HOMER2Q9NSB8 354 aa11.58□□□□□ -0.56
SKA2-208ENST00000583927 RBM8AQ9Y5S9 174 aaKnown RBP11.58□□□□□ -0.56
SKA2-208ENST00000583927 MYH7BA7E2Y1 1941 aa11.58□□□□□ -0.56
SKA2-208ENST00000583927 FRMPD2Q68DX3 1309 aaPredicted RBP11.58□□□□□ -0.56
SKA2-208ENST00000583927 KBTBD13C9JR72 458 aa11.57□□□□□ -0.56
SKA2-208ENST00000583927 DUSP11O75319 330 aaKnown RBP11.57□□□□□ -0.56
SKA2-208ENST00000583927 PARP1P09874 1014 aaKnown RBP11.57□□□□□ -0.56
SKA2-208ENST00000583927 TAL1P17542 331 aaPredicted RBP11.57□□□□□ -0.56
SKA2-208ENST00000583927 NKX3-2P78367 333 aa11.57□□□□□ -0.56
SKA2-208ENST00000583927 CNTN2Q02246 1040 aa11.57□□□□□ -0.56
SKA2-208ENST00000583927 ACVR2BQ13705 512 aa11.57□□□□□ -0.56
SKA2-208ENST00000583927 SART3Q15020 963 aaKnown RBP11.57□□□□□ -0.56
SKA2-208ENST00000583927 SNX17Q15036 470 aa11.57□□□□□ -0.56
SKA2-208ENST00000583927 NECTIN1Q15223 517 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms