RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 CCDC91Q7Z6B0 441 aa13.33□□□□□ -0.28
ERBB2-206ENST00000578373 CCDC26Q8TAB7 109 aa13.33□□□□□ -0.28
ERBB2-206ENST00000578373 TUBB2BQ9BVA1 445 aa13.33□□□□□ -0.28
ERBB2-206ENST00000578373 A2ML1A8K2U0 1454 aa13.33□□□□□ -0.28
ERBB2-206ENST00000578373 AP5Z1O43299 807 aa13.32□□□□□ -0.28
ERBB2-206ENST00000578373 CUL4BQ13620 913 aa13.32□□□□□ -0.28
ERBB2-206ENST00000578373 TTLL12Q14166 644 aaPredicted RBP13.32□□□□□ -0.28
ERBB2-206ENST00000578373 KRT31Q15323 416 aa13.32□□□□□ -0.28
ERBB2-206ENST00000578373 TTC16Q8NEE8 873 aa13.32□□□□□ -0.28
ERBB2-206ENST00000578373 SRPRBQ9Y5M8 271 aaKnown RBP13.32□□□□□ -0.28
ERBB2-206ENST00000578373 UBE2Q2LH0YL09 131 aa13.32□□□□□ -0.28
ERBB2-206ENST00000578373 NF2P35240 595 aa13.32□□□□□ -0.28
ERBB2-206ENST00000578373 C2orf54Q08AI8 447 aa13.32□□□□□ -0.28
ERBB2-206ENST00000578373 ERFEQ4G0M1 354 aa13.32□□□□□ -0.28
ERBB2-206ENST00000578373 KIAA0825Q8IV33 1275 aa13.32□□□□□ -0.28
ERBB2-206ENST00000578373 MB21D2Q8IYB1 491 aaPredicted RBP13.32□□□□□ -0.28
ERBB2-206ENST00000578373 TRIM58Q8NG06 486 aa13.32□□□□□ -0.28
ERBB2-206ENST00000578373 WDR24Q96S15 920 aa13.32□□□□□ -0.28
ERBB2-206ENST00000578373 MTRF1LQ9UGC7 380 aaKnown RBP13.32□□□□□ -0.28
ERBB2-206ENST00000578373 IKBKGQ9Y6K9 419 aa13.32□□□□□ -0.28
ERBB2-206ENST00000578373 UNC13BO14795 1591 aa13.32□□□□□ -0.28
ERBB2-206ENST00000578373 BUB1BO60566 1050 aaPredicted RBP13.32□□□□□ -0.28
ERBB2-206ENST00000578373 ZBTB16Q05516 673 aa13.32□□□□□ -0.28
ERBB2-206ENST00000578373 PAK2Q13177 524 aa13.32□□□□□ -0.28
ERBB2-206ENST00000578373 PP2D1A8MPX8 630 aa13.32□□□□□ -0.28
ERBB2-206ENST00000578373 PTPREP23469 700 aa13.32□□□□□ -0.28
ERBB2-206ENST00000578373 ANKS4BQ8N8V4 417 aa13.32□□□□□ -0.28
ERBB2-206ENST00000578373 USP40Q9NVE5 1235 aa13.32□□□□□ -0.28
ERBB2-206ENST00000578373 ACTN2P35609 894 aa13.31□□□□□ -0.28
ERBB2-206ENST00000578373 LIFRP42702 1097 aa13.31□□□□□ -0.28
ERBB2-206ENST00000578373 BTDP43251 543 aa13.31□□□□□ -0.28
ERBB2-206ENST00000578373 PPFIA1Q13136 1202 aa13.31□□□□□ -0.28
ERBB2-206ENST00000578373 GSPT2Q8IYD1 628 aaKnown RBP13.31□□□□□ -0.28
ERBB2-206ENST00000578373 POLR1AO95602 1720 aaPredicted RBP13.31□□□□□ -0.28
ERBB2-206ENST00000578373 FTCDO95954 541 aa13.31□□□□□ -0.28
ERBB2-206ENST00000578373 UBXN2AP68543 259 aa13.31□□□□□ -0.28
ERBB2-206ENST00000578373 UAP1Q16222 522 aaPredicted RBP13.31□□□□□ -0.28
ERBB2-206ENST00000578373 FAM26FQ5R3K3 315 aa13.31□□□□□ -0.28
ERBB2-206ENST00000578373 ATG9AQ7Z3C6 839 aa13.31□□□□□ -0.28
ERBB2-206ENST00000578373 SLC44A5Q8NCS7 719 aa13.31□□□□□ -0.28
ERBB2-206ENST00000578373 KIAA1024Q9UPX6 916 aa13.31□□□□□ -0.28
ERBB2-206ENST00000578373 USTQ9Y2C2 406 aa13.31□□□□□ -0.28
ERBB2-206ENST00000578373 SPHKAPQ2M3C7 1700 aa13.31□□□□□ -0.28
ERBB2-206ENST00000578373 BAZ2BQ9UIF8 2168 aaKnown RBP13.31□□□□□ -0.28
ERBB2-206ENST00000578373 MYCLP12524 364 aaPredicted RBP13.31□□□□□ -0.28
ERBB2-206ENST00000578373 PRDX5P30044 214 aa13.31□□□□□ -0.28
ERBB2-206ENST00000578373 PABPC4Q13310 644 aaKnown RBP eCLIP13.31□□□□□ -0.28
ERBB2-206ENST00000578373 E4F1Q66K89 784 aaPredicted RBP13.31□□□□□ -0.28
ERBB2-206ENST00000578373 HAUS3Q68CZ6 603 aa13.31□□□□□ -0.28
ERBB2-206ENST00000578373 SPICE1Q8N0Z3 855 aa13.31□□□□□ -0.28
ERBB2-206ENST00000578373 PSTPIP2Q9H939 334 aa13.31□□□□□ -0.28
ERBB2-206ENST00000578373 ARHGEF35A5YM69 484 aa13.31□□□□□ -0.28
ERBB2-206ENST00000578373 SORBS3O60504 671 aa13.31□□□□□ -0.28
ERBB2-206ENST00000578373 PPP1R2P41236 205 aa13.31□□□□□ -0.28
ERBB2-206ENST00000578373 ADAM9Q13443 819 aa13.31□□□□□ -0.28
ERBB2-206ENST00000578373 CCDC6Q16204 474 aa13.31□□□□□ -0.28
ERBB2-206ENST00000578373 RESP18Q5W5W9 173 aa13.31□□□□□ -0.28
ERBB2-206ENST00000578373 TBCKQ8TEA7 893 aa13.31□□□□□ -0.28
ERBB2-206ENST00000578373 KRT12Q99456 494 aa13.31□□□□□ -0.28
ERBB2-206ENST00000578373 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.31□□□□□ -0.28
ERBB2-206ENST00000578373 ASIC3Q9UHC3 531 aa13.31□□□□□ -0.28
ERBB2-206ENST00000578373 PHLPP2Q6ZVD8 1323 aa13.3□□□□□ -0.28
ERBB2-206ENST00000578373 SHROOM2Q13796 1616 aa13.3□□□□□ -0.28
ERBB2-206ENST00000578373 ZNF609O15014 1411 aa13.3□□□□□ -0.28
ERBB2-206ENST00000578373 SAMD15Q9P1V8 674 aa13.3□□□□□ -0.28
ERBB2-206ENST00000578373 ARMCX3Q9UH62 379 aaPredicted RBP13.3□□□□□ -0.28
ERBB2-206ENST00000578373 HYOU1Q9Y4L1 999 aa13.3□□□□□ -0.28
ERBB2-206ENST00000578373 RNF40O75150 1001 aa13.3□□□□□ -0.28
ERBB2-206ENST00000578373 NDUFA10O95299 355 aa13.3□□□□□ -0.28
ERBB2-206ENST00000578373 MOCS3O95396 460 aa13.3□□□□□ -0.28
ERBB2-206ENST00000578373 CTNNA1P35221 906 aaKnown RBP13.3□□□□□ -0.28
ERBB2-206ENST00000578373 PPP1R14CQ8TAE6 165 aa13.3□□□□□ -0.28
ERBB2-206ENST00000578373 PIGSQ96S52 555 aa13.3□□□□□ -0.28
ERBB2-206ENST00000578373 CCDC77Q9BR77 488 aa13.3□□□□□ -0.28
ERBB2-206ENST00000578373 UTP11Q9Y3A2 253 aaKnown RBP13.3□□□□□ -0.28
ERBB2-206ENST00000578373 UBN2Q6ZU65 1347 aa13.3□□□□□ -0.28
ERBB2-206ENST00000578373 ALKQ9UM73 1620 aa13.3□□□□□ -0.28
ERBB2-206ENST00000578373 QRICH2Q9H0J4 1663 aa13.3□□□□□ -0.28
ERBB2-206ENST00000578373 MEIS1O00470 390 aa13.3□□□□□ -0.28
ERBB2-206ENST00000578373 FLOT1O75955 427 aa13.3□□□□□ -0.28
ERBB2-206ENST00000578373 PRPHP41219 470 aa13.3□□□□□ -0.28
ERBB2-206ENST00000578373 FOXO4P98177 505 aa13.3□□□□□ -0.28
ERBB2-206ENST00000578373 PANK4Q9NVE7 773 aa13.3□□□□□ -0.28
ERBB2-206ENST00000578373 HDAC6Q9UBN7 1215 aa13.3□□□□□ -0.28
ERBB2-206ENST00000578373 ZNF804BA4D1E1 1349 aa13.3□□□□□ -0.28
ERBB2-206ENST00000578373 CCDC151A5D8V7 595 aa13.29□□□□□ -0.28
ERBB2-206ENST00000578373 LONP1P36776 959 aaKnown RBP13.29□□□□□ -0.28
ERBB2-206ENST00000578373 NSMFQ6X4W1 530 aa13.29□□□□□ -0.28
ERBB2-206ENST00000578373 KCTD1Q719H9 257 aa13.29□□□□□ -0.28
ERBB2-206ENST00000578373 CERS3Q8IU89 383 aa13.29□□□□□ -0.28
ERBB2-206ENST00000578373 CCDC105Q8IYK2 499 aa13.29□□□□□ -0.28
ERBB2-206ENST00000578373 MTUS1Q9ULD2 1270 aa13.29□□□□□ -0.28
ERBB2-206ENST00000578373 CAPN7Q9Y6W3 813 aa13.29□□□□□ -0.28
ERBB2-206ENST00000578373 KRIT1O00522 736 aa13.29□□□□□ -0.28
ERBB2-206ENST00000578373 XRCC5P13010 732 aaKnown RBP13.29□□□□□ -0.28
ERBB2-206ENST00000578373 PLCG1P19174 1290 aa13.29□□□□□ -0.28
ERBB2-206ENST00000578373 SEL1L2Q5TEA6 688 aa13.29□□□□□ -0.28
ERBB2-206ENST00000578373 SRP68Q9UHB9 627 aaKnown RBP13.29□□□□□ -0.28
ERBB2-206ENST00000578373 CPS1P31327 1500 aa13.29□□□□□ -0.28
ERBB2-206ENST00000578373 WDR17Q8IZU2 1322 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms