RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-208	ENST00000578178	RNF146	Q9NTX7	359 aa		12.84	□□□□□ -0.35
PPP4R1-208	ENST00000578178	NRBP1	Q9UHY1	535 aa		12.84	□□□□□ -0.35
PPP4R1-208	ENST00000578178	TNKS	O95271	1327 aa		12.84	□□□□□ -0.35
PPP4R1-208	ENST00000578178	MCM3AP	O60318	1980 aa		12.83	□□□□□ -0.35
PPP4R1-208	ENST00000578178	CYP21A2	P08686	494 aa		12.83	□□□□□ -0.36
PPP4R1-208	ENST00000578178	MNX1	P50219	401 aa	Predicted RBP	12.83	□□□□□ -0.36
PPP4R1-208	ENST00000578178	TTBK2	Q6IQ55	1244 aa		12.83	□□□□□ -0.36
PPP4R1-208	ENST00000578178	CCDC174	Q6PII3	467 aa		12.83	□□□□□ -0.36
PPP4R1-208	ENST00000578178	SKAP1	Q86WV1	359 aa		12.83	□□□□□ -0.36
PPP4R1-208	ENST00000578178	ANKRD35	Q8N283	1001 aa		12.83	□□□□□ -0.36
PPP4R1-208	ENST00000578178	MSL3	Q8N5Y2	521 aa	Known RBP	12.83	□□□□□ -0.36
PPP4R1-208	ENST00000578178	ENAH	Q8N8S7	591 aa	Predicted RBP	12.83	□□□□□ -0.36
PPP4R1-208	ENST00000578178	PNMA1	Q8ND90	353 aa		12.83	□□□□□ -0.36
PPP4R1-208	ENST00000578178	DPF3	Q92784	378 aa		12.83	□□□□□ -0.36
PPP4R1-208	ENST00000578178	CCDC136	Q96JN2	1154 aa		12.83	□□□□□ -0.36
PPP4R1-208	ENST00000578178	AGBL1	Q96MI9	1066 aa		12.83	□□□□□ -0.36
PPP4R1-208	ENST00000578178	TINF2	Q9BSI4	451 aa		12.83	□□□□□ -0.36
PPP4R1-208	ENST00000578178	GPCPD1	Q9NPB8	672 aa		12.83	□□□□□ -0.36
PPP4R1-208	ENST00000578178	ZSWIM5	Q9P217	1185 aa		12.83	□□□□□ -0.36
PPP4R1-208	ENST00000578178	LRRC37A2	A6NM11	1700 aa		12.82	□□□□□ -0.36
PPP4R1-208	ENST00000578178	SEPT4	O43236	478 aa		12.82	□□□□□ -0.36
PPP4R1-208	ENST00000578178	ICAM1	P05362	532 aa		12.82	□□□□□ -0.36
PPP4R1-208	ENST00000578178	NEFL	P07196	543 aa		12.82	□□□□□ -0.36
PPP4R1-208	ENST00000578178	ALAS1	P13196	640 aa		12.82	□□□□□ -0.36
PPP4R1-208	ENST00000578178	SLC16A2	P36021	539 aa		12.82	□□□□□ -0.36
PPP4R1-208	ENST00000578178	SNAP25	P60880	206 aa		12.82	□□□□□ -0.36
PPP4R1-208	ENST00000578178	TRDN	Q13061	729 aa		12.82	□□□□□ -0.36
PPP4R1-208	ENST00000578178	GPATCH4	Q5T3I0	446 aa	Known RBP	12.82	□□□□□ -0.36
PPP4R1-208	ENST00000578178	ZNF467	Q7Z7K2	595 aa	Predicted RBP	12.82	□□□□□ -0.36
PPP4R1-208	ENST00000578178	ANKS1A	Q92625	1134 aa		12.82	□□□□□ -0.36
PPP4R1-208	ENST00000578178	C11orf49	Q9H6J7	331 aa		12.82	□□□□□ -0.36
PPP4R1-208	ENST00000578178	KAT14	Q9H8E8	782 aa		12.82	□□□□□ -0.36
PPP4R1-208	ENST00000578178	CCPG1	Q9ULG6	757 aa		12.82	□□□□□ -0.36
PPP4R1-208	ENST00000578178	SYNGAP1	Q96PV0	1343 aa		12.82	□□□□□ -0.36
PPP4R1-208	ENST00000578178	LCT	P09848	1927 aa		12.82	□□□□□ -0.36
PPP4R1-208	ENST00000578178	SMCHD1	A6NHR9	2005 aa		12.81	□□□□□ -0.36
PPP4R1-208	ENST00000578178	PRAMEF19	Q5SWL8	479 aa		12.81	□□□□□ -0.36
PPP4R1-208	ENST00000578178	KIAA1211	Q6ZU35	1233 aa		12.81	□□□□□ -0.36
PPP4R1-208	ENST00000578178	RALYL	Q86SE5	291 aa	Known RBP	12.81	□□□□□ -0.36
PPP4R1-208	ENST00000578178	MAP4K1	Q92918	833 aa		12.81	□□□□□ -0.36
PPP4R1-208	ENST00000578178	FGD4	Q96M96	766 aa		12.81	□□□□□ -0.36
PPP4R1-208	ENST00000578178	TRERF1	Q96PN7	1200 aa		12.81	□□□□□ -0.36
PPP4R1-208	ENST00000578178	ESYT1	Q9BSJ8	1104 aa		12.81	□□□□□ -0.36
PPP4R1-208	ENST00000578178	A1CF	Q9NQ94	594 aa	Known RBP	12.81	□□□□□ -0.36
PPP4R1-208	ENST00000578178	PNMA2	Q9UL42	364 aa		12.81	□□□□□ -0.36
PPP4R1-208	ENST00000578178	CNPY2	Q9Y2B0	182 aa		12.81	□□□□□ -0.36
PPP4R1-208	ENST00000578178	RBM8A	Q9Y5S9	174 aa	Known RBP	12.81	□□□□□ -0.36
PPP4R1-208	ENST00000578178	PFAS	O15067	1338 aa		12.81	□□□□□ -0.36
PPP4R1-208	ENST00000578178	MYH6	P13533	1939 aa		12.8	□□□□□ -0.36
PPP4R1-208	ENST00000578178		E7EWF7	191 aa		12.8	□□□□□ -0.36
PPP4R1-208	ENST00000578178		H0YGN5	161 aa		12.8	□□□□□ -0.36
PPP4R1-208	ENST00000578178	DNM1L	O00429	736 aa		12.8	□□□□□ -0.36
PPP4R1-208	ENST00000578178	EVI5	O60447	810 aa		12.8	□□□□□ -0.36
PPP4R1-208	ENST00000578178	COL6A1	P12109	1028 aa		12.8	□□□□□ -0.36
PPP4R1-208	ENST00000578178	TAL1	P17542	331 aa	Predicted RBP	12.8	□□□□□ -0.36
PPP4R1-208	ENST00000578178	ASPRV1	Q53RT3	343 aa		12.8	□□□□□ -0.36
PPP4R1-208	ENST00000578178	IFIT1B	Q5T764	474 aa	Known RBP	12.8	□□□□□ -0.36
PPP4R1-208	ENST00000578178	ANO1	Q5XXA6	986 aa		12.8	□□□□□ -0.36
PPP4R1-208	ENST00000578178	MAMDC4	Q6UXC1	1216 aa		12.8	□□□□□ -0.36
PPP4R1-208	ENST00000578178	CYB5R4	Q7L1T6	521 aa		12.8	□□□□□ -0.36
PPP4R1-208	ENST00000578178	FAM133A	Q8N9E0	248 aa		12.8	□□□□□ -0.36
PPP4R1-208	ENST00000578178	NCOA7	Q8NI08	942 aa		12.8	□□□□□ -0.36
PPP4R1-208	ENST00000578178	NR2E3	Q9Y5X4	410 aa		12.8	□□□□□ -0.36
PPP4R1-208	ENST00000578178	TAF6L	Q9Y6J9	622 aa		12.8	□□□□□ -0.36
PPP4R1-208	ENST00000578178	WDR19	Q8NEZ3	1342 aa		12.8	□□□□□ -0.36
PPP4R1-208	ENST00000578178	POTEB2	H3BUK9	544 aa		12.79	□□□□□ -0.36
PPP4R1-208	ENST00000578178	ZNF865	P0CJ78	1059 aa	Predicted RBP	12.79	□□□□□ -0.36
PPP4R1-208	ENST00000578178	GOLGA8H	P0CJ92	632 aa		12.79	□□□□□ -0.36
PPP4R1-208	ENST00000578178	RARB	P10826	455 aa		12.79	□□□□□ -0.36
PPP4R1-208	ENST00000578178	AKR1A1	P14550	325 aa		12.79	□□□□□ -0.36
PPP4R1-208	ENST00000578178	SEC23A	Q15436	765 aa		12.79	□□□□□ -0.36
PPP4R1-208	ENST00000578178	MUM1L1	Q5H9M0	696 aa		12.79	□□□□□ -0.36
PPP4R1-208	ENST00000578178	STOX1	Q6ZVD7	989 aa		12.79	□□□□□ -0.36
PPP4R1-208	ENST00000578178	LSG1	Q9H089	658 aa	Known RBP	12.79	□□□□□ -0.36
PPP4R1-208	ENST00000578178	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	12.79	□□□□□ -0.36
PPP4R1-208	ENST00000578178	ZHX1	Q9UKY1	873 aa	Predicted RBP	12.79	□□□□□ -0.36
PPP4R1-208	ENST00000578178	SNAI1	O95863	264 aa	Predicted RBP	12.78	□□□□□ -0.36
PPP4R1-208	ENST00000578178	PARP1	P09874	1014 aa	Known RBP	12.78	□□□□□ -0.36
PPP4R1-208	ENST00000578178	CNTN2	Q02246	1040 aa		12.78	□□□□□ -0.36
PPP4R1-208	ENST00000578178	SART3	Q15020	963 aa	Known RBP	12.78	□□□□□ -0.36
PPP4R1-208	ENST00000578178	CASC1	Q6TDU7	716 aa		12.78	□□□□□ -0.36
PPP4R1-208	ENST00000578178	NSMF	Q6X4W1	530 aa		12.78	□□□□□ -0.36
PPP4R1-208	ENST00000578178	ARMCX2	Q7L311	632 aa		12.78	□□□□□ -0.36
PPP4R1-208	ENST00000578178	ARRDC4	Q8NCT1	418 aa		12.78	□□□□□ -0.36
PPP4R1-208	ENST00000578178	ANO2	Q9NQ90	1003 aa		12.78	□□□□□ -0.36
PPP4R1-208	ENST00000578178	CYP39A1	Q9NYL5	469 aa		12.78	□□□□□ -0.36
PPP4R1-208	ENST00000578178	ERICH2	A1L162	156 aa		12.77	□□□□□ -0.37
PPP4R1-208	ENST00000578178	KBTBD13	C9JR72	458 aa		12.77	□□□□□ -0.37
PPP4R1-208	ENST00000578178	NFIB	O00712	420 aa		12.77	□□□□□ -0.37
PPP4R1-208	ENST00000578178	IFIT3	O14879	490 aa	Known RBP	12.77	□□□□□ -0.37
PPP4R1-208	ENST00000578178	CDC45	O75419	566 aa		12.77	□□□□□ -0.37
PPP4R1-208	ENST00000578178	CDC37	Q16543	378 aa	Predicted RBP	12.77	□□□□□ -0.37
PPP4R1-208	ENST00000578178	CCDC144CP	Q8IYA2	1237 aa		12.77	□□□□□ -0.37
PPP4R1-208	ENST00000578178	MB21D2	Q8IYB1	491 aa	Predicted RBP	12.77	□□□□□ -0.37
PPP4R1-208	ENST00000578178	C7orf61	Q8IZ16	206 aa		12.77	□□□□□ -0.37
PPP4R1-208	ENST00000578178	UBA5	Q9GZZ9	404 aa		12.77	□□□□□ -0.37
PPP4R1-208	ENST00000578178	CPVL	Q9H3G5	476 aa		12.77	□□□□□ -0.37
PPP4R1-208	ENST00000578178	ABHD16B	Q9H3Z7	469 aa		12.77	□□□□□ -0.37
PPP4R1-208	ENST00000578178	XPNPEP3	Q9NQH7	507 aa		12.77	□□□□□ -0.37
PPP4R1-208	ENST00000578178	SOWAHB	A6NEL2	793 aa		12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms