RNA–Protein interactions for RNA: ENST00000577828.5

LINC00511-204, long intergenic non-protein coding RNA 511, humanhuman

TSL 3 BASIC

Gene LINC00511, Length 538 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-204ENST00000577828 PDCP20941 246 aa11.77□□□□□ -0.53
LINC00511-204ENST00000577828 DSG3P32926 999 aa11.77□□□□□ -0.53
LINC00511-204ENST00000577828 COPB2P35606 906 aa11.77□□□□□ -0.53
LINC00511-204ENST00000577828 SLC16A2P36021 539 aa11.77□□□□□ -0.53
LINC00511-204ENST00000577828 TM4SF4P48230 202 aa11.77□□□□□ -0.53
LINC00511-204ENST00000577828 HERVK_113P62684 666 aa11.77□□□□□ -0.53
LINC00511-204ENST00000577828 DGKZQ13574 1117 aa11.77□□□□□ -0.53
LINC00511-204ENST00000577828 CDC37Q16543 378 aaPredicted RBP11.77□□□□□ -0.53
LINC00511-204ENST00000577828 TTBK2Q6IQ55 1244 aa11.77□□□□□ -0.53
LINC00511-204ENST00000577828 PPP1R18Q6NYC8 613 aa11.77□□□□□ -0.53
LINC00511-204ENST00000577828 NBPF11Q86T75 865 aa11.77□□□□□ -0.53
LINC00511-204ENST00000577828 IFNL1Q8IU54 200 aa11.77□□□□□ -0.53
LINC00511-204ENST00000577828 MTMR8Q96EF0 704 aa11.77□□□□□ -0.53
LINC00511-204ENST00000577828 UBA5Q9GZZ9 404 aa11.77□□□□□ -0.53
LINC00511-204ENST00000577828 JMJD4Q9H9V9 463 aa11.77□□□□□ -0.53
LINC00511-204ENST00000577828 SLC38A10Q9HBR0 1119 aa11.77□□□□□ -0.53
LINC00511-204ENST00000577828 CWC22Q9HCG8 908 aaKnown RBP11.77□□□□□ -0.53
LINC00511-204ENST00000577828 ORC3Q9UBD5 711 aaPredicted RBP11.77□□□□□ -0.53
LINC00511-204ENST00000577828 TSKSQ9UJT2 592 aa11.77□□□□□ -0.53
LINC00511-204ENST00000577828 ADAMTS5Q9UNA0 930 aa11.77□□□□□ -0.53
LINC00511-204ENST00000577828 SPDYE16A6NNV3 312 aaPredicted RBP11.76□□□□□ -0.53
LINC00511-204ENST00000577828 VWA5AO00534 786 aa11.76□□□□□ -0.53
LINC00511-204ENST00000577828 ATP2A1O14983 1001 aa11.76□□□□□ -0.53
LINC00511-204ENST00000577828 CYTH3O43739 400 aa11.76□□□□□ -0.53
LINC00511-204ENST00000577828 CTDNEP1O95476 244 aa11.76□□□□□ -0.53
LINC00511-204ENST00000577828 SCG2P13521 617 aa11.76□□□□□ -0.53
LINC00511-204ENST00000577828 KIF23Q02241 960 aaPredicted RBP11.76□□□□□ -0.53
LINC00511-204ENST00000577828 ST3GAL1Q11201 340 aa11.76□□□□□ -0.53
LINC00511-204ENST00000577828 TRIM29Q14134 588 aa11.76□□□□□ -0.53
LINC00511-204ENST00000577828 PFKFB3Q16875 520 aaPredicted RBP11.76□□□□□ -0.53
LINC00511-204ENST00000577828 HOMER1Q86YM7 354 aa11.76□□□□□ -0.53
LINC00511-204ENST00000577828 CCDC82Q8N4S0 544 aa11.76□□□□□ -0.53
LINC00511-204ENST00000577828 CCDC148Q8NFR7 591 aa11.76□□□□□ -0.53
LINC00511-204ENST00000577828 PHKBQ93100 1093 aa11.76□□□□□ -0.53
LINC00511-204ENST00000577828 AMNQ9BXJ7 453 aa11.76□□□□□ -0.53
LINC00511-204ENST00000577828 SH3GLB2Q9NR46 395 aa11.76□□□□□ -0.53
LINC00511-204ENST00000577828 FBXO28Q9NVF7 368 aa11.76□□□□□ -0.53
LINC00511-204ENST00000577828 V9GY48 417 aaPredicted RBP11.76□□□□□ -0.53
LINC00511-204ENST00000577828 ICAM1P05362 532 aa11.75□□□□□ -0.53
LINC00511-204ENST00000577828 RGS19P49795 217 aa11.75□□□□□ -0.53
LINC00511-204ENST00000577828 MLLT1Q03111 559 aaPredicted RBP11.75□□□□□ -0.53
LINC00511-204ENST00000577828 QRICH1Q2TAL8 776 aa11.75□□□□□ -0.53
LINC00511-204ENST00000577828 TKFCQ3LXA3 575 aa11.75□□□□□ -0.53
LINC00511-204ENST00000577828 FBXO11Q86XK2 927 aa11.75□□□□□ -0.53
LINC00511-204ENST00000577828 CMTR1Q8N1G2 835 aaKnown RBP11.75□□□□□ -0.53
LINC00511-204ENST00000577828 FAM43AQ8N2R8 423 aa11.75□□□□□ -0.53
LINC00511-204ENST00000577828 ATG4CQ96DT6 458 aa11.75□□□□□ -0.53
LINC00511-204ENST00000577828 IPO9Q96P70 1041 aaKnown RBP11.75□□□□□ -0.53
LINC00511-204ENST00000577828 PIGSQ96S52 555 aa11.75□□□□□ -0.53
LINC00511-204ENST00000577828 TEX13BQ9BXU2 312 aa11.75□□□□□ -0.53
LINC00511-204ENST00000577828 MCOLN1Q9GZU1 580 aa11.75□□□□□ -0.53
LINC00511-204ENST00000577828 MAF1Q9H063 256 aa11.75□□□□□ -0.53
LINC00511-204ENST00000577828 GLT8D2Q9H1C3 349 aa11.75□□□□□ -0.53
LINC00511-204ENST00000577828 ZFYVE28Q9HCC9 887 aa11.75□□□□□ -0.53
LINC00511-204ENST00000577828 VAT1LQ9HCJ6 419 aa11.75□□□□□ -0.53
LINC00511-204ENST00000577828 RABGAP1Q9Y3P9 1069 aa11.75□□□□□ -0.53
LINC00511-204ENST00000577828 A0A0G2JMZ2 1700 aa11.74□□□□□ -0.53
LINC00511-204ENST00000577828 IGF2BP3O00425 579 aaKnown RBP eCLIP11.74□□□□□ -0.53
LINC00511-204ENST00000577828 JAK2O60674 1132 aa11.74□□□□□ -0.53
LINC00511-204ENST00000577828 GJB2P29033 226 aa11.74□□□□□ -0.53
LINC00511-204ENST00000577828 CCNA1P78396 465 aa11.74□□□□□ -0.53
LINC00511-204ENST00000577828 GALNT17Q6IS24 598 aa11.74□□□□□ -0.53
LINC00511-204ENST00000577828 SAMD1Q6SPF0 538 aaPredicted RBP11.74□□□□□ -0.53
LINC00511-204ENST00000577828 HEATR3Q7Z4Q2 680 aa11.74□□□□□ -0.53
LINC00511-204ENST00000577828 DDX11Q96FC9 970 aa11.74□□□□□ -0.53
LINC00511-204ENST00000577828 P2RX7Q99572 595 aaKnown RBP11.74□□□□□ -0.53
LINC00511-204ENST00000577828 PTPN18Q99952 460 aa11.74□□□□□ -0.53
LINC00511-204ENST00000577828 CPVLQ9H3G5 476 aa11.74□□□□□ -0.53
LINC00511-204ENST00000577828 BARHL2Q9NY43 387 aa11.74□□□□□ -0.53
LINC00511-204ENST00000577828 CCPG1Q9ULG6 757 aa11.74□□□□□ -0.53
LINC00511-204ENST00000577828 ABCB11O95342 1321 aa11.74□□□□□ -0.53
LINC00511-204ENST00000577828 SLC25A27O95847 323 aa11.73□□□□□ -0.53
LINC00511-204ENST00000577828 CALML3P27482 149 aa11.73□□□□□ -0.53
LINC00511-204ENST00000577828 TAF1CQ15572 869 aaPredicted RBP11.73□□□□□ -0.53
LINC00511-204ENST00000577828 SLC35G1Q2M3R5 365 aa11.73□□□□□ -0.53
LINC00511-204ENST00000577828 CCDC174Q6PII3 467 aa11.73□□□□□ -0.53
LINC00511-204ENST00000577828 REPS2Q8NFH8 660 aa11.73□□□□□ -0.53
LINC00511-204ENST00000577828 GPRC5AQ8NFJ5 357 aa11.73□□□□□ -0.53
LINC00511-204ENST00000577828 BICD2Q8TD16 824 aa11.73□□□□□ -0.53
LINC00511-204ENST00000577828 C8orf76Q96K31 380 aa11.73□□□□□ -0.53
LINC00511-204ENST00000577828 ALG1Q9BT22 464 aa11.73□□□□□ -0.53
LINC00511-204ENST00000577828 BRMS1Q9HCU9 246 aa11.73□□□□□ -0.53
LINC00511-204ENST00000577828 RNF186Q9NXI6 227 aa11.73□□□□□ -0.53
LINC00511-204ENST00000577828 FBXO40Q9UH90 709 aa11.73□□□□□ -0.53
LINC00511-204ENST00000577828 ZNF214Q9UL59 606 aaPredicted RBP11.73□□□□□ -0.53
LINC00511-204ENST00000577828 MRPL11Q9Y3B7 192 aaKnown RBP11.73□□□□□ -0.53
LINC00511-204ENST00000577828 PCDHA1Q9Y5I3 950 aa11.73□□□□□ -0.53
LINC00511-204ENST00000577828 PARP14Q460N5 1801 aa11.72□□□□□ -0.53
LINC00511-204ENST00000577828 ESYT2A0FGR8 921 aa11.72□□□□□ -0.53
LINC00511-204ENST00000577828 H3BQV1 296 aa11.72□□□□□ -0.53
LINC00511-204ENST00000577828 TRPA1O75762 1119 aa11.72□□□□□ -0.53
LINC00511-204ENST00000577828 CYP2C8P10632 490 aa11.72□□□□□ -0.53
LINC00511-204ENST00000577828 FDPSP14324 419 aaKnown RBP11.72□□□□□ -0.53
LINC00511-204ENST00000577828 GNA11P29992 359 aa11.72□□□□□ -0.53
LINC00511-204ENST00000577828 STAT3P40763 770 aa11.72□□□□□ -0.53
LINC00511-204ENST00000577828 NAPAP54920 295 aa11.72□□□□□ -0.53
LINC00511-204ENST00000577828 TMEM132BQ14DG7 1078 aa11.72□□□□□ -0.53
LINC00511-204ENST00000577828 SAFBQ15424 915 aaKnown RBP eCLIP11.72□□□□□ -0.53
LINC00511-204ENST00000577828 PKN1Q16512 942 aa11.72□□□□□ -0.53
LINC00511-204ENST00000577828 FAM110CQ1W6H9 321 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms