RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 FAM126BQ8IXS8 530 aa13.91□□□□□ -0.18
CTDNEP1-212ENST00000576613 STRBPQ96SI9 672 aaKnown RBP13.91□□□□□ -0.18
CTDNEP1-212ENST00000576613 PBX4Q9BYU1 374 aa13.91□□□□□ -0.18
CTDNEP1-212ENST00000576613 LRRCC1Q9C099 1032 aa13.91□□□□□ -0.18
CTDNEP1-212ENST00000576613 MTIF3Q9H2K0 278 aaKnown RBP13.91□□□□□ -0.18
CTDNEP1-212ENST00000576613 SLC38A10Q9HBR0 1119 aa13.91□□□□□ -0.18
CTDNEP1-212ENST00000576613 RAVER2Q9HCJ3 691 aaKnown RBP13.91□□□□□ -0.18
CTDNEP1-212ENST00000576613 FEM1BQ9UK73 627 aa13.91□□□□□ -0.18
CTDNEP1-212ENST00000576613 ADCY6O43306 1168 aa13.9□□□□□ -0.18
CTDNEP1-212ENST00000576613 FDX1P10109 184 aa13.9□□□□□ -0.18
CTDNEP1-212ENST00000576613 RAB30Q15771 203 aa13.9□□□□□ -0.18
CTDNEP1-212ENST00000576613 AKNAD1Q5T1N1 836 aa13.9□□□□□ -0.18
CTDNEP1-212ENST00000576613 RASIP1Q5U651 963 aa13.9□□□□□ -0.18
CTDNEP1-212ENST00000576613 C16orf59Q7L2K0 433 aa13.9□□□□□ -0.18
CTDNEP1-212ENST00000576613 ARMCX2Q7L311 632 aa13.9□□□□□ -0.18
CTDNEP1-212ENST00000576613 ZNF444Q8N0Y2 327 aaPredicted RBP13.9□□□□□ -0.18
CTDNEP1-212ENST00000576613 STK11IPQ8N1F8 1099 aa13.9□□□□□ -0.18
CTDNEP1-212ENST00000576613 ATXN2LQ8WWM7 1075 aaKnown RBP13.9□□□□□ -0.18
CTDNEP1-212ENST00000576613 PPP1R12CQ9BZL4 782 aa13.9□□□□□ -0.18
CTDNEP1-212ENST00000576613 MSRAQ9UJ68 235 aa13.9□□□□□ -0.18
CTDNEP1-212ENST00000576613 COG6Q9Y2V7 657 aa13.9□□□□□ -0.18
CTDNEP1-212ENST00000576613 CHD9Q3L8U1 2897 aa13.9□□□□□ -0.18
CTDNEP1-212ENST00000576613 GSG1L2A8MUP6 293 aa13.89□□□□□ -0.19
CTDNEP1-212ENST00000576613 GNAT2P19087 354 aa13.89□□□□□ -0.19
CTDNEP1-212ENST00000576613 PBX2P40425 430 aa13.89□□□□□ -0.19
CTDNEP1-212ENST00000576613 TDO2P48775 406 aa13.89□□□□□ -0.19
CTDNEP1-212ENST00000576613 ZNF365Q70YC5 407 aa13.89□□□□□ -0.19
CTDNEP1-212ENST00000576613 CCDC144CPQ8IYA2 1237 aa13.89□□□□□ -0.19
CTDNEP1-212ENST00000576613 GMCL1P1Q8NEA9 526 aa13.89□□□□□ -0.19
CTDNEP1-212ENST00000576613 PPM1EQ8WY54 764 aa13.89□□□□□ -0.19
CTDNEP1-212ENST00000576613 APPBP2Q92624 585 aa13.89□□□□□ -0.19
CTDNEP1-212ENST00000576613 MKL1Q969V6 931 aa13.89□□□□□ -0.19
CTDNEP1-212ENST00000576613 GPATCH3Q96I76 525 aa13.89□□□□□ -0.19
CTDNEP1-212ENST00000576613 PRDM12Q9H4Q4 367 aa13.89□□□□□ -0.19
CTDNEP1-212ENST00000576613 THEGQ9P2T0 379 aa13.89□□□□□ -0.19
CTDNEP1-212ENST00000576613 IGKV6D-41A0A0C4DH26 115 aa13.88□□□□□ -0.19
CTDNEP1-212ENST00000576613 GRXCR1A8MXD5 290 aa13.88□□□□□ -0.19
CTDNEP1-212ENST00000576613 CABYRO75952 493 aa13.88□□□□□ -0.19
CTDNEP1-212ENST00000576613 TTLL1O95922 423 aa13.88□□□□□ -0.19
CTDNEP1-212ENST00000576613 ACRP10323 421 aa13.88□□□□□ -0.19
CTDNEP1-212ENST00000576613 NKX3-2P78367 333 aa13.88□□□□□ -0.19
CTDNEP1-212ENST00000576613 IRX5P78411 483 aaPredicted RBP13.88□□□□□ -0.19
CTDNEP1-212ENST00000576613 TNFAIP2Q03169 654 aa13.88□□□□□ -0.19
CTDNEP1-212ENST00000576613 NOL8Q76FK4 1167 aaKnown RBP13.88□□□□□ -0.19
CTDNEP1-212ENST00000576613 LRRC47Q8N1G4 583 aaKnown RBP13.88□□□□□ -0.19
CTDNEP1-212ENST00000576613 KBTBD3Q8NAB2 608 aa13.88□□□□□ -0.19
CTDNEP1-212ENST00000576613 CEP95Q96GE4 821 aa13.88□□□□□ -0.19
CTDNEP1-212ENST00000576613 FGD4Q96M96 766 aa13.88□□□□□ -0.19
CTDNEP1-212ENST00000576613 SEZ6LQ9BYH1 1024 aa13.88□□□□□ -0.19
CTDNEP1-212ENST00000576613 ACAD9Q9H845 621 aa13.88□□□□□ -0.19
CTDNEP1-212ENST00000576613 IL23AQ9NPF7 189 aa13.88□□□□□ -0.19
CTDNEP1-212ENST00000576613 HOMER2Q9NSB8 354 aa13.88□□□□□ -0.19
CTDNEP1-212ENST00000576613 ECHDC1Q9NTX5 307 aa13.88□□□□□ -0.19
CTDNEP1-212ENST00000576613 MTMR4Q9NYA4 1195 aa13.88□□□□□ -0.19
CTDNEP1-212ENST00000576613 ISY1Q9ULR0 285 aaKnown RBP13.88□□□□□ -0.19
CTDNEP1-212ENST00000576613 ASB14A6NK59 587 aa13.87□□□□□ -0.19
CTDNEP1-212ENST00000576613 CD4P01730 458 aa13.87□□□□□ -0.19
CTDNEP1-212ENST00000576613 APPP05067 770 aa13.87□□□□□ -0.19
CTDNEP1-212ENST00000576613 ZFYP08048 801 aaPredicted RBP13.87□□□□□ -0.19
CTDNEP1-212ENST00000576613 BMP3P12645 472 aa13.87□□□□□ -0.19
CTDNEP1-212ENST00000576613 CYP2C18P33260 490 aa13.87□□□□□ -0.19
CTDNEP1-212ENST00000576613 STAT2P52630 851 aa13.87□□□□□ -0.19
CTDNEP1-212ENST00000576613 IL27Q8NEV9 243 aa13.87□□□□□ -0.19
CTDNEP1-212ENST00000576613 HERVK_113Q902F9 699 aa13.87□□□□□ -0.19
CTDNEP1-212ENST00000576613 KATNBL1Q9H079 304 aa13.87□□□□□ -0.19
CTDNEP1-212ENST00000576613 AP5M1Q9H0R1 490 aa13.87□□□□□ -0.19
CTDNEP1-212ENST00000576613 HIPK3Q9H422 1215 aa13.87□□□□□ -0.19
CTDNEP1-212ENST00000576613 SLC28A3Q9HAS3 691 aa13.87□□□□□ -0.19
CTDNEP1-212ENST00000576613 GBF1Q92538 1859 aa13.87□□□□□ -0.19
CTDNEP1-212ENST00000576613 PLIN4Q96Q06 1357 aa13.86□□□□□ -0.19
CTDNEP1-212ENST00000576613 CTAGE5O15320 804 aa13.86□□□□□ -0.19
CTDNEP1-212ENST00000576613 GPAA1O43292 621 aa13.86□□□□□ -0.19
CTDNEP1-212ENST00000576613 ZEB2O60315 1214 aa13.86□□□□□ -0.19
CTDNEP1-212ENST00000576613 PRDM1O75626 825 aa13.86□□□□□ -0.19
CTDNEP1-212ENST00000576613 FGBP02675 491 aa13.86□□□□□ -0.19
CTDNEP1-212ENST00000576613 SLC3A2P08195 630 aaKnown RBP13.86□□□□□ -0.19
CTDNEP1-212ENST00000576613 TSPY3P0CV98 308 aa13.86□□□□□ -0.19
CTDNEP1-212ENST00000576613 TSPY8P0CW00 308 aa13.86□□□□□ -0.19
CTDNEP1-212ENST00000576613 IGFBP4P22692 258 aa13.86□□□□□ -0.19
CTDNEP1-212ENST00000576613 BEX3Q00994 111 aa13.86□□□□□ -0.19
CTDNEP1-212ENST00000576613 CNTN2Q02246 1040 aa13.86□□□□□ -0.19
CTDNEP1-212ENST00000576613 PDE4BQ07343 736 aa13.86□□□□□ -0.19
CTDNEP1-212ENST00000576613 IKQ13123 557 aaPredicted RBP13.86□□□□□ -0.19
CTDNEP1-212ENST00000576613 FSCN1Q16658 493 aaKnown RBP13.86□□□□□ -0.19
CTDNEP1-212ENST00000576613 LRRFIP1Q32MZ4 808 aaKnown RBP13.86□□□□□ -0.19
CTDNEP1-212ENST00000576613 SLFN13Q68D06 897 aa13.86□□□□□ -0.19
CTDNEP1-212ENST00000576613 CXCL17Q6UXB2 119 aa13.86□□□□□ -0.19
CTDNEP1-212ENST00000576613 TLK2Q86UE8 772 aa13.86□□□□□ -0.19
CTDNEP1-212ENST00000576613 FAM160B2Q86V87 743 aa13.86□□□□□ -0.19
CTDNEP1-212ENST00000576613 FAM133AQ8N9E0 248 aa13.86□□□□□ -0.19
CTDNEP1-212ENST00000576613 CHURC1Q8WUH1 139 aa13.86□□□□□ -0.19
CTDNEP1-212ENST00000576613 OSBP2Q969R2 916 aa13.86□□□□□ -0.19
CTDNEP1-212ENST00000576613 ASB2Q96Q27 587 aa13.86□□□□□ -0.19
CTDNEP1-212ENST00000576613 LRRC37A2A6NM11 1700 aa13.86□□□□□ -0.19
CTDNEP1-212ENST00000576613 TMEM232C9JQI7 657 aa13.85□□□□□ -0.19
CTDNEP1-212ENST00000576613 RNF113AO15541 343 aaKnown RBP13.85□□□□□ -0.19
CTDNEP1-212ENST00000576613 SMARCA5O60264 1052 aaPredicted RBP13.85□□□□□ -0.19
CTDNEP1-212ENST00000576613 MRPS5P82675 430 aaKnown RBP13.85□□□□□ -0.19
CTDNEP1-212ENST00000576613 ITGA7Q13683 1181 aa13.85□□□□□ -0.19
CTDNEP1-212ENST00000576613 TKFCQ3LXA3 575 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms