RNA–Protein interactions for RNA: ENST00000574997.1

TRIM25-209, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-209ENST00000574997 RNPC3Q96LT9 517 aaKnown RBP7.71□□□□□ -1.18
TRIM25-209ENST00000574997 MTIF3Q9H2K0 278 aaKnown RBP7.71□□□□□ -1.18
TRIM25-209ENST00000574997 FBXO28Q9NVF7 368 aa7.71□□□□□ -1.18
TRIM25-209ENST00000574997 MTMR4Q9NYA4 1195 aa7.71□□□□□ -1.18
TRIM25-209ENST00000574997 COL11A1P12107 1806 aaPredicted RBP7.71□□□□□ -1.18
TRIM25-209ENST00000574997 CYP2D7A0A087X1C5 515 aa7.7□□□□□ -1.18
TRIM25-209ENST00000574997 A0A0U1RQG5 324 aaPredicted RBP7.7□□□□□ -1.18
TRIM25-209ENST00000574997 ARVCFO00192 962 aa7.7□□□□□ -1.18
TRIM25-209ENST00000574997 GPAA1O43292 621 aa7.7□□□□□ -1.18
TRIM25-209ENST00000574997 PQBP1O60828 265 aaKnown RBP7.7□□□□□ -1.18
TRIM25-209ENST00000574997 SNAI1O95863 264 aaPredicted RBP7.7□□□□□ -1.18
TRIM25-209ENST00000574997 TSPY3P0CV98 308 aa7.7□□□□□ -1.18
TRIM25-209ENST00000574997 TSPY8P0CW00 308 aa7.7□□□□□ -1.18
TRIM25-209ENST00000574997 BMP3P12645 472 aa7.7□□□□□ -1.18
TRIM25-209ENST00000574997 NT5C2P49902 561 aa7.7□□□□□ -1.18
TRIM25-209ENST00000574997 CDK7P50613 346 aa7.7□□□□□ -1.18
TRIM25-209ENST00000574997 STAT2P52630 851 aa7.7□□□□□ -1.18
TRIM25-209ENST00000574997 EVX2Q03828 476 aa7.7□□□□□ -1.18
TRIM25-209ENST00000574997 FAAP100Q0VG06 881 aa7.7□□□□□ -1.18
TRIM25-209ENST00000574997 GNASQ5JWF2 1037 aa7.7□□□□□ -1.18
TRIM25-209ENST00000574997 C9orf50Q5SZB4 431 aa7.7□□□□□ -1.18
TRIM25-209ENST00000574997 IQSEC1Q6DN90 963 aa7.7□□□□□ -1.18
TRIM25-209ENST00000574997 MFSD5Q6N075 450 aa7.7□□□□□ -1.18
TRIM25-209ENST00000574997 SH3RF1Q7Z6J0 888 aa7.7□□□□□ -1.18
TRIM25-209ENST00000574997 IFNL3Q8IZI9 196 aa7.7□□□□□ -1.18
TRIM25-209ENST00000574997 MAFAQ8NHW3 353 aaPredicted RBP7.7□□□□□ -1.18
TRIM25-209ENST00000574997 STAG1Q8WVM7 1258 aa7.7□□□□□ -1.18
TRIM25-209ENST00000574997 GMCL1Q96IK5 515 aa7.7□□□□□ -1.18
TRIM25-209ENST00000574997 MAF1Q9H063 256 aa7.7□□□□□ -1.18
TRIM25-209ENST00000574997 UPF3AQ9H1J1 476 aaKnown RBP7.7□□□□□ -1.18
TRIM25-209ENST00000574997 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.7□□□□□ -1.18
TRIM25-209ENST00000574997 ASGR1P07306 291 aa7.69□□□□□ -1.18
TRIM25-209ENST00000574997 C6orf222P0C671 652 aaPredicted RBP7.69□□□□□ -1.18
TRIM25-209ENST00000574997 CCDC144BQ3MJ40 725 aa7.69□□□□□ -1.18
TRIM25-209ENST00000574997 SLFN13Q68D06 897 aa7.69□□□□□ -1.18
TRIM25-209ENST00000574997 PSRC1Q6PGN9 363 aaPredicted RBP7.69□□□□□ -1.18
TRIM25-209ENST00000574997 CLEC10AQ8IUN9 316 aa7.69□□□□□ -1.18
TRIM25-209ENST00000574997 CPXCR1Q8N123 301 aa7.69□□□□□ -1.18
TRIM25-209ENST00000574997 OSBP2Q969R2 916 aa7.69□□□□□ -1.18
TRIM25-209ENST00000574997 KIFC2Q96AC6 838 aa7.69□□□□□ -1.18
TRIM25-209ENST00000574997 VTI1AQ96AJ9 217 aa7.69□□□□□ -1.18
TRIM25-209ENST00000574997 CEP95Q96GE4 821 aa7.69□□□□□ -1.18
TRIM25-209ENST00000574997 MPHOSPH6Q99547 160 aaKnown RBP7.69□□□□□ -1.18
TRIM25-209ENST00000574997 BCL11AQ9H165 835 aa7.69□□□□□ -1.18
TRIM25-209ENST00000574997 ACAD9Q9H845 621 aa7.69□□□□□ -1.18
TRIM25-209ENST00000574997 ZBTB47Q9UFB7 747 aaPredicted RBP7.69□□□□□ -1.18
TRIM25-209ENST00000574997 ZHX1Q9UKY1 873 aaPredicted RBP7.69□□□□□ -1.18
TRIM25-209ENST00000574997 RIPK3Q9Y572 518 aa7.69□□□□□ -1.18
TRIM25-209ENST00000574997 GREB1LQ9C091 1923 aaPredicted RBP7.69□□□□□ -1.18
TRIM25-209ENST00000574997 SYNRGQ9UMZ2 1314 aa7.69□□□□□ -1.18
TRIM25-209ENST00000574997 PLIN4Q96Q06 1357 aa7.69□□□□□ -1.18
TRIM25-209ENST00000574997 B4DLN1 442 aa7.68□□□□□ -1.18
TRIM25-209ENST00000574997 FOSL2P15408 326 aa7.68□□□□□ -1.18
TRIM25-209ENST00000574997 TAL1P17542 331 aaPredicted RBP7.68□□□□□ -1.18
TRIM25-209ENST00000574997 SLC1A4P43007 532 aa7.68□□□□□ -1.18
TRIM25-209ENST00000574997 MRPL12P52815 198 aaKnown RBP7.68□□□□□ -1.18
TRIM25-209ENST00000574997 TFAP4Q01664 338 aa7.68□□□□□ -1.18
TRIM25-209ENST00000574997 TNFAIP2Q03169 654 aa7.68□□□□□ -1.18
TRIM25-209ENST00000574997 SLFNL1Q499Z3 407 aa7.68□□□□□ -1.18
TRIM25-209ENST00000574997 ARMCX2Q7L311 632 aa7.68□□□□□ -1.18
TRIM25-209ENST00000574997 RPUSD2Q8IZ73 545 aaKnown RBP7.68□□□□□ -1.18
TRIM25-209ENST00000574997 FAM133AQ8N9E0 248 aa7.68□□□□□ -1.18
TRIM25-209ENST00000574997 AP5M1Q9H0R1 490 aa7.68□□□□□ -1.18
TRIM25-209ENST00000574997 NAPBQ9H115 298 aa7.68□□□□□ -1.18
TRIM25-209ENST00000574997 RAVER2Q9HCJ3 691 aaKnown RBP7.68□□□□□ -1.18
TRIM25-209ENST00000574997 ADD3Q9UEY8 706 aaKnown RBP7.68□□□□□ -1.18
TRIM25-209ENST00000574997 TBX21Q9UL17 535 aa7.68□□□□□ -1.18
TRIM25-209ENST00000574997 MYH4Q9Y623 1939 aa7.68□□□□□ -1.18
TRIM25-209ENST00000574997 TSPY2A6NKD2 308 aa7.67□□□□□ -1.18
TRIM25-209ENST00000574997 TMEM232C9JQI7 657 aa7.67□□□□□ -1.18
TRIM25-209ENST00000574997 SMARCA5O60264 1052 aaPredicted RBP7.67□□□□□ -1.18
TRIM25-209ENST00000574997 CD4P01730 458 aa7.67□□□□□ -1.18
TRIM25-209ENST00000574997 PFKMP08237 780 aa7.67□□□□□ -1.18
TRIM25-209ENST00000574997 SUPT20HL2P0C7V6 817 aa7.67□□□□□ -1.18
TRIM25-209ENST00000574997 PCP11498 1178 aaKnown RBP7.67□□□□□ -1.18
TRIM25-209ENST00000574997 DNAJB2P25686 324 aa7.67□□□□□ -1.18
TRIM25-209ENST00000574997 ITGB8P26012 769 aa7.67□□□□□ -1.18
TRIM25-209ENST00000574997 NOVP48745 357 aa7.67□□□□□ -1.18
TRIM25-209ENST00000574997 PPARAQ07869 468 aa7.67□□□□□ -1.18
TRIM25-209ENST00000574997 RAB30Q15771 203 aa7.67□□□□□ -1.18
TRIM25-209ENST00000574997 BRDTQ58F21 947 aaPredicted RBP7.67□□□□□ -1.18
TRIM25-209ENST00000574997 AKNAD1Q5T1N1 836 aa7.67□□□□□ -1.18
TRIM25-209ENST00000574997 RASIP1Q5U651 963 aa7.67□□□□□ -1.18
TRIM25-209ENST00000574997 FAM126BQ8IXS8 530 aa7.67□□□□□ -1.18
TRIM25-209ENST00000574997 CCDC144CPQ8IYA2 1237 aa7.67□□□□□ -1.18
TRIM25-209ENST00000574997 SLC43A3Q8NBI5 491 aa7.67□□□□□ -1.18
TRIM25-209ENST00000574997 TIFAQ96CG3 184 aa7.67□□□□□ -1.18
TRIM25-209ENST00000574997 GAS2L1Q99501 681 aaPredicted RBP7.67□□□□□ -1.18
TRIM25-209ENST00000574997 NUP88Q99567 741 aaPredicted RBP7.67□□□□□ -1.18
TRIM25-209ENST00000574997 TTYH1Q9H313 450 aaPredicted RBP7.67□□□□□ -1.18
TRIM25-209ENST00000574997 ZNF576Q9H609 170 aa7.67□□□□□ -1.18
TRIM25-209ENST00000574997 VTA1Q9NP79 307 aa7.67□□□□□ -1.18
TRIM25-209ENST00000574997 PRDM6Q9NQX0 595 aa7.67□□□□□ -1.18
TRIM25-209ENST00000574997 MSRAQ9UJ68 235 aa7.67□□□□□ -1.18
TRIM25-209ENST00000574997 ANAPC4Q9UJX5 808 aa7.67□□□□□ -1.18
TRIM25-209ENST00000574997 SMIM22K7EJ46 135 aa7.66□□□□□ -1.18
TRIM25-209ENST00000574997 NKRFO15226 690 aaKnown RBP eCLIP7.66□□□□□ -1.18
TRIM25-209ENST00000574997 KPNA6O60684 536 aa7.66□□□□□ -1.18
TRIM25-209ENST00000574997 FGBP02675 491 aa7.66□□□□□ -1.18
TRIM25-209ENST00000574997 SLC4A3P48751 1232 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms