RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 CCPG1Q9ULG6 757 aa17.32■□□□□ 0.36
CACNA1A-202ENST00000573710 DMRT2Q9Y5R5 561 aa17.32■□□□□ 0.36
CACNA1A-202ENST00000573710 ZNF263O14978 683 aa17.32■□□□□ 0.36
CACNA1A-202ENST00000573710 KIF19Q2TAC6 998 aa17.32■□□□□ 0.36
CACNA1A-202ENST00000573710 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-202ENST00000573710 GAS7O60861 476 aa17.32■□□□□ 0.36
CACNA1A-202ENST00000573710 CYP26C1Q6V0L0 522 aa17.32■□□□□ 0.36
CACNA1A-202ENST00000573710 PDCD6IPQ8WUM4 868 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-202ENST00000573710 SART1O43290 800 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-202ENST00000573710 TEKT4Q8WW24 435 aa17.32■□□□□ 0.36
CACNA1A-202ENST00000573710 C6orf203Q9P0P8 240 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-202ENST00000573710 CFTRP13569 1480 aa17.32■□□□□ 0.36
CACNA1A-202ENST00000573710 APBA3O96018 575 aa17.32■□□□□ 0.36
CACNA1A-202ENST00000573710 POLGP54098 1239 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-202ENST00000573710 MECOMQ03112 1051 aa17.32■□□□□ 0.36
CACNA1A-202ENST00000573710 KLHL30Q0D2K2 578 aa17.32■□□□□ 0.36
CACNA1A-202ENST00000573710 ASPHQ12797 758 aa17.32■□□□□ 0.36
CACNA1A-202ENST00000573710 TEKT1Q969V4 418 aa17.32■□□□□ 0.36
CACNA1A-202ENST00000573710 PHACTR3Q96KR7 559 aa17.32■□□□□ 0.36
CACNA1A-202ENST00000573710 CCNL1Q9UK58 526 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-202ENST00000573710 V9GY48 417 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-202ENST00000573710 NEMP1O14524 444 aa17.31■□□□□ 0.36
CACNA1A-202ENST00000573710 CTDSPL2Q05D32 466 aa17.31■□□□□ 0.36
CACNA1A-202ENST00000573710 SCYL3Q8IZE3 742 aa17.31■□□□□ 0.36
CACNA1A-202ENST00000573710 C7orf31Q8N865 590 aa17.31■□□□□ 0.36
CACNA1A-202ENST00000573710 NCLNQ969V3 563 aa17.31■□□□□ 0.36
CACNA1A-202ENST00000573710 RPGRIP1Q96KN7 1286 aa17.31■□□□□ 0.36
CACNA1A-202ENST00000573710 FAN1Q9Y2M0 1017 aa17.31■□□□□ 0.36
CACNA1A-202ENST00000573710 TRIM27P14373 513 aa17.31■□□□□ 0.36
CACNA1A-202ENST00000573710 SDSP20132 328 aa17.31■□□□□ 0.36
CACNA1A-202ENST00000573710 LSM14BQ9BX40 385 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-202ENST00000573710 SLC8A2Q9UPR5 921 aa17.31■□□□□ 0.36
CACNA1A-202ENST00000573710 RINT1Q6NUQ1 792 aa17.31■□□□□ 0.36
CACNA1A-202ENST00000573710 FTOQ9C0B1 505 aaKnown RBP eCLIP17.31■□□□□ 0.36
CACNA1A-202ENST00000573710 FAM207AQ9NSI2 230 aaPredicted RBP17.31■□□□□ 0.36
CACNA1A-202ENST00000573710 MAPKAPK5Q8IW41 473 aa17.31■□□□□ 0.36
CACNA1A-202ENST00000573710 KIF17Q9P2E2 1029 aa17.31■□□□□ 0.36
CACNA1A-202ENST00000573710 KIF21BO75037 1637 aa17.31■□□□□ 0.36
CACNA1A-202ENST00000573710 RARSP54136 660 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-202ENST00000573710 SLFN5Q08AF3 891 aa17.31■□□□□ 0.36
CACNA1A-202ENST00000573710 NONOQ15233 471 aaKnown RBP eCLIP17.31■□□□□ 0.36
CACNA1A-202ENST00000573710 MYL10Q9BUA6 226 aa17.31■□□□□ 0.36
CACNA1A-202ENST00000573710 hCG_2014768A0A024R1R8 64 aa17.31■□□□□ 0.36
CACNA1A-202ENST00000573710 NAA35Q5VZE5 725 aa17.31■□□□□ 0.36
CACNA1A-202ENST00000573710 HAUS1Q96CS2 278 aa17.31■□□□□ 0.36
CACNA1A-202ENST00000573710 MAN1A2O60476 641 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 POLE2P56282 527 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 ART3Q13508 389 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 DLGAP5Q15398 846 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 TRIM60Q495X7 471 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 DDX42Q86XP3 938 aaKnown RBP eCLIP17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 DNAAF3Q8N9W5 541 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 LRRC59Q96AG4 307 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 HESX1Q9UBX0 185 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 MAP3K7O43318 606 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 SECISBP2LQ93073 1101 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 CYTH2Q99418 400 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 PLCD1P51178 756 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 TEX9Q8N6V9 391 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 TRIM8Q9BZR9 551 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 SLC52A1Q9NWF4 448 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 PRG4Q92954 1404 aaPredicted RBP17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 LRRC9Q6ZRR7 1453 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 BUB1O43683 1085 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 MAP2K2P36507 400 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 CARSP49589 748 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 PHLDB3Q6NSJ2 640 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 RRAGAQ7L523 313 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 HIPK4Q8NE63 616 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 CCDC90BQ9GZT6 254 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 VCAM1P19320 739 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 C16orf87Q6PH81 154 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 ZBTB8OSQ8IWT0 167 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 CCDC127Q96BQ5 260 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 TAB2Q9NYJ8 693 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 GARSP41250 739 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 PSMC1P62191 440 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 PTK2BQ14289 1009 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 SLMAPQ14BN4 828 aa17.3■□□□□ 0.36
CACNA1A-202ENST00000573710 HIBADHP31937 336 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-202ENST00000573710 ELF1P32519 619 aa17.29■□□□□ 0.36
CACNA1A-202ENST00000573710 HADHQ16836 314 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-202ENST00000573710 XKR9Q5GH70 373 aa17.29■□□□□ 0.36
CACNA1A-202ENST00000573710 RIC8AQ9NPQ8 531 aa17.29■□□□□ 0.36
CACNA1A-202ENST00000573710 RNF113AO15541 343 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-202ENST00000573710 ESRRGP62508 458 aa17.29■□□□□ 0.36
CACNA1A-202ENST00000573710 RFX6Q8HWS3 928 aa17.29■□□□□ 0.36
CACNA1A-202ENST00000573710 CERS3Q8IU89 383 aa17.29■□□□□ 0.36
CACNA1A-202ENST00000573710 SRPK1Q96SB4 655 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-202ENST00000573710 DPH5Q9H2P9 285 aa17.29■□□□□ 0.36
CACNA1A-202ENST00000573710 TRPC5Q9UL62 973 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-202ENST00000573710 TBL3Q12788 808 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-202ENST00000573710 ANKRD20A4Q4UJ75 823 aa17.29■□□□□ 0.36
CACNA1A-202ENST00000573710 ANKRD20A8PQ5CZ79 823 aa17.29■□□□□ 0.36
CACNA1A-202ENST00000573710 ANKRD20A2Q5SQ80 823 aa17.29■□□□□ 0.36
CACNA1A-202ENST00000573710 ANKRD20A1Q5TYW2 823 aa17.29■□□□□ 0.36
CACNA1A-202ENST00000573710 CEP70Q8NHQ1 597 aa17.29■□□□□ 0.36
CACNA1A-202ENST00000573710 VMP1Q96GC9 406 aa17.29■□□□□ 0.36
CACNA1A-202ENST00000573710 MEIS3Q99687 375 aa17.29■□□□□ 0.36
CACNA1A-202ENST00000573710 SAMSN1Q9NSI8 373 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms