RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 RAG1P15918 1043 aa17.55■□□□□ 0.4
NPLOC4-207ENST00000572346 SMAD3P84022 425 aaKnown RBP17.55■□□□□ 0.4
NPLOC4-207ENST00000572346 TTC22Q5TAA0 569 aa17.55■□□□□ 0.4
NPLOC4-207ENST00000572346 CCSAPQ6IQ19 270 aaPredicted RBP17.55■□□□□ 0.4
NPLOC4-207ENST00000572346 SKAP1Q86WV1 359 aa17.55■□□□□ 0.4
NPLOC4-207ENST00000572346 ANKRD35Q8N283 1001 aa17.55■□□□□ 0.4
NPLOC4-207ENST00000572346 NEDD1Q8NHV4 660 aa17.55■□□□□ 0.4
NPLOC4-207ENST00000572346 NUP133Q8WUM0 1156 aa17.55■□□□□ 0.4
NPLOC4-207ENST00000572346 FGD4Q96M96 766 aa17.55■□□□□ 0.4
NPLOC4-207ENST00000572346 STARD7Q9NQZ5 370 aa17.55■□□□□ 0.4
NPLOC4-207ENST00000572346 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.55■□□□□ 0.4
NPLOC4-207ENST00000572346 MYADML2A6NDP7 307 aa17.54■□□□□ 0.4
NPLOC4-207ENST00000572346 MOXD2PA6NHM9 499 aa17.54■□□□□ 0.4
NPLOC4-207ENST00000572346 DUSP11O75319 330 aaKnown RBP17.54■□□□□ 0.4
NPLOC4-207ENST00000572346 TSPY3P0CV98 308 aa17.54■□□□□ 0.4
NPLOC4-207ENST00000572346 TSPY8P0CW00 308 aa17.54■□□□□ 0.4
NPLOC4-207ENST00000572346 OAZ1P54368 228 aa17.54■□□□□ 0.4
NPLOC4-207ENST00000572346 EPHB4P54760 987 aa17.54■□□□□ 0.4
NPLOC4-207ENST00000572346 PDE4BQ07343 736 aa17.54■□□□□ 0.4
NPLOC4-207ENST00000572346 FAAP100Q0VG06 881 aa17.54■□□□□ 0.4
NPLOC4-207ENST00000572346 ACVR2BQ13705 512 aa17.54■□□□□ 0.4
NPLOC4-207ENST00000572346 KCNA10Q16322 511 aa17.54■□□□□ 0.4
NPLOC4-207ENST00000572346 SLFN13Q68D06 897 aa17.54■□□□□ 0.4
NPLOC4-207ENST00000572346 ANKRD33Q7Z3H0 272 aa17.54■□□□□ 0.4
NPLOC4-207ENST00000572346 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.54■□□□□ 0.4
NPLOC4-207ENST00000572346 CHST13Q8NET6 341 aa17.54■□□□□ 0.4
NPLOC4-207ENST00000572346 TOX2Q96NM4 488 aa17.54■□□□□ 0.4
NPLOC4-207ENST00000572346 CDX2Q99626 313 aaPredicted RBP17.54■□□□□ 0.4
NPLOC4-207ENST00000572346 NACAP1Q9BZK3 213 aa17.54■□□□□ 0.4
NPLOC4-207ENST00000572346 SEMA6BQ9H3T3 888 aa17.54■□□□□ 0.4
NPLOC4-207ENST00000572346 TMEM39AQ9NV64 488 aa17.54■□□□□ 0.4
NPLOC4-207ENST00000572346 FBXO40Q9UH90 709 aa17.54■□□□□ 0.4
NPLOC4-207ENST00000572346 ADCY6O43306 1168 aa17.53■□□□□ 0.4
NPLOC4-207ENST00000572346 BMP3P12645 472 aa17.53■□□□□ 0.4
NPLOC4-207ENST00000572346 CST5P28325 142 aaPredicted RBP17.53■□□□□ 0.4
NPLOC4-207ENST00000572346 IRX5P78411 483 aaPredicted RBP17.53■□□□□ 0.4
NPLOC4-207ENST00000572346 PPARAQ07869 468 aa17.53■□□□□ 0.4
NPLOC4-207ENST00000572346 RNPC3Q96LT9 517 aaKnown RBP17.53■□□□□ 0.4
NPLOC4-207ENST00000572346 NAPBQ9H115 298 aa17.53■□□□□ 0.4
NPLOC4-207ENST00000572346 TTYH1Q9H313 450 aaPredicted RBP17.53■□□□□ 0.4
NPLOC4-207ENST00000572346 ABHD16BQ9H3Z7 469 aa17.53■□□□□ 0.4
NPLOC4-207ENST00000572346 DCDC2CA8MYV0 355 aa17.52■□□□□ 0.4
NPLOC4-207ENST00000572346 TMEM232C9JQI7 657 aa17.52■□□□□ 0.4
NPLOC4-207ENST00000572346 FDX1P10109 184 aa17.52■□□□□ 0.4
NPLOC4-207ENST00000572346 TFAP4Q01664 338 aa17.52■□□□□ 0.4
NPLOC4-207ENST00000572346 FPGSQ05932 587 aa17.52■□□□□ 0.4
NPLOC4-207ENST00000572346 CCDC144BQ3MJ40 725 aa17.52■□□□□ 0.4
NPLOC4-207ENST00000572346 ZMYM1Q5SVZ6 1142 aa17.52■□□□□ 0.4
NPLOC4-207ENST00000572346 ARMCX2Q7L311 632 aa17.52■□□□□ 0.4
NPLOC4-207ENST00000572346 HOMER2Q9NSB8 354 aa17.52■□□□□ 0.4
NPLOC4-207ENST00000572346 UNC80Q8N2C7 3258 aa17.52■□□□□ 0.39
NPLOC4-207ENST00000572346 SLC3A2P08195 630 aaKnown RBP17.51■□□□□ 0.39
NPLOC4-207ENST00000572346 C6orf222P0C671 652 aaPredicted RBP17.51■□□□□ 0.39
NPLOC4-207ENST00000572346 STAT2P52630 851 aa17.51■□□□□ 0.39
NPLOC4-207ENST00000572346 CCDC144CPQ8IYA2 1237 aa17.51■□□□□ 0.39
NPLOC4-207ENST00000572346 PCSK9Q8NBP7 692 aaKnown RBP17.51■□□□□ 0.39
NPLOC4-207ENST00000572346 GLT1D1Q96MS3 346 aa17.51■□□□□ 0.39
NPLOC4-207ENST00000572346 UPF3AQ9H1J1 476 aaKnown RBP17.51■□□□□ 0.39
NPLOC4-207ENST00000572346 ZNF536O15090 1300 aa17.5■□□□□ 0.39
NPLOC4-207ENST00000572346 ELP1O95163 1332 aa17.5■□□□□ 0.39
NPLOC4-207ENST00000572346 ASGR1P07306 291 aa17.5■□□□□ 0.39
NPLOC4-207ENST00000572346 GSPT1P15170 499 aaKnown RBP17.5■□□□□ 0.39
NPLOC4-207ENST00000572346 GJA9P57773 515 aa17.5■□□□□ 0.39
NPLOC4-207ENST00000572346 CNTN2Q02246 1040 aa17.5■□□□□ 0.39
NPLOC4-207ENST00000572346 GMCL1Q96IK5 515 aa17.5■□□□□ 0.39
NPLOC4-207ENST00000572346 COL25A1Q9BXS0 654 aaPredicted RBP17.5■□□□□ 0.39
NPLOC4-207ENST00000572346 KATNBL1Q9H079 304 aa17.5■□□□□ 0.39
NPLOC4-207ENST00000572346 ACAD9Q9H845 621 aa17.5■□□□□ 0.39
NPLOC4-207ENST00000572346 SPC25Q9HBM1 224 aa17.5■□□□□ 0.39
NPLOC4-207ENST00000572346 TBX21Q9UL17 535 aa17.5■□□□□ 0.39
NPLOC4-207ENST00000572346 ISY1Q9ULR0 285 aaKnown RBP17.5■□□□□ 0.39
NPLOC4-207ENST00000572346 FOXP2O15409 715 aa17.49■□□□□ 0.39
NPLOC4-207ENST00000572346 TIMP1P01033 207 aa17.49■□□□□ 0.39
NPLOC4-207ENST00000572346 SDSP20132 328 aa17.49■□□□□ 0.39
NPLOC4-207ENST00000572346 MCCP23508 829 aa17.49■□□□□ 0.39
NPLOC4-207ENST00000572346 SLC1A4P43007 532 aa17.49■□□□□ 0.39
NPLOC4-207ENST00000572346 CDK7P50613 346 aa17.49■□□□□ 0.39
NPLOC4-207ENST00000572346 FAM160B2Q86V87 743 aa17.49■□□□□ 0.39
NPLOC4-207ENST00000572346 FAM133AQ8N9E0 248 aa17.49■□□□□ 0.39
NPLOC4-207ENST00000572346 CHURC1Q8WUH1 139 aa17.49■□□□□ 0.39
NPLOC4-207ENST00000572346 STAG1Q8WVM7 1258 aa17.49■□□□□ 0.39
NPLOC4-207ENST00000572346 MYLIPQ8WY64 445 aa17.49■□□□□ 0.39
NPLOC4-207ENST00000572346 CHMP4CQ96CF2 233 aa17.49■□□□□ 0.39
NPLOC4-207ENST00000572346 AGBL1Q96MI9 1066 aa17.49■□□□□ 0.39
NPLOC4-207ENST00000572346 A1CFQ9NQ94 594 aaKnown RBP17.49■□□□□ 0.39
NPLOC4-207ENST00000572346 RNF146Q9NTX7 359 aa17.49■□□□□ 0.39
NPLOC4-207ENST00000572346 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.49■□□□□ 0.39
NPLOC4-207ENST00000572346 MROH7Q68CQ1 1323 aa17.48■□□□□ 0.39
NPLOC4-207ENST00000572346 TMEM265A0A087WTH1 108 aa17.48■□□□□ 0.39
NPLOC4-207ENST00000572346 HIP1O00291 1037 aa17.48■□□□□ 0.39
NPLOC4-207ENST00000572346 CTDSPL2Q05D32 466 aa17.48■□□□□ 0.39
NPLOC4-207ENST00000572346 IKQ13123 557 aaPredicted RBP17.48■□□□□ 0.39
NPLOC4-207ENST00000572346 GNASQ5JWF2 1037 aa17.48■□□□□ 0.39
NPLOC4-207ENST00000572346 CCDC129Q6ZRS4 1044 aa17.48■□□□□ 0.39
NPLOC4-207ENST00000572346 TICAM2Q86XR7 235 aa17.48■□□□□ 0.39
NPLOC4-207ENST00000572346 MAFAQ8NHW3 353 aaPredicted RBP17.48■□□□□ 0.39
NPLOC4-207ENST00000572346 VTI1AQ96AJ9 217 aa17.48■□□□□ 0.39
NPLOC4-207ENST00000572346 IL17RBQ9NRM6 502 aa17.48■□□□□ 0.39
NPLOC4-207ENST00000572346 DIAPH3Q9NSV4 1193 aa17.48■□□□□ 0.39
NPLOC4-207ENST00000572346 STX8Q9UNK0 236 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms