RNA–Protein interactions for RNA: ENST00000572021.5

TRIM25-205, Transcript of tripartite motif containing 25, humanhuman

TSL 1 (best)

Gene TRIM25, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-205ENST00000572021 NBPF11Q86T75 865 aa13.88□□□□□ -0.19
TRIM25-205ENST00000572021 ADGRF4Q8IZF3 695 aa13.88□□□□□ -0.19
TRIM25-205ENST00000572021 SHCBP1Q8NEM2 672 aa13.88□□□□□ -0.19
TRIM25-205ENST00000572021 UPF3BQ9BZI7 483 aaKnown RBP13.88□□□□□ -0.19
TRIM25-205ENST00000572021 RANBP17Q9H2T7 1088 aaKnown RBP13.88□□□□□ -0.19
TRIM25-205ENST00000572021 MROH8Q9H579 483 aa13.88□□□□□ -0.19
TRIM25-205ENST00000572021 BRPF3Q9ULD4 1205 aa13.88□□□□□ -0.19
TRIM25-205ENST00000572021 MYH6P13533 1939 aa13.88□□□□□ -0.19
TRIM25-205ENST00000572021 BAZ2BQ9UIF8 2168 aaKnown RBP13.88□□□□□ -0.19
TRIM25-205ENST00000572021 PALM3A6NDB9 673 aaPredicted RBP13.88□□□□□ -0.19
TRIM25-205ENST00000572021 SLC15A5A6NIM6 579 aa13.88□□□□□ -0.19
TRIM25-205ENST00000572021 CCDC85CA6NKD9 419 aa13.88□□□□□ -0.19
TRIM25-205ENST00000572021 ATP2A1O14983 1001 aa13.88□□□□□ -0.19
TRIM25-205ENST00000572021 EPB41L2O43491 1005 aaKnown RBP13.88□□□□□ -0.19
TRIM25-205ENST00000572021 PGK2P07205 417 aa13.88□□□□□ -0.19
TRIM25-205ENST00000572021 HMGB1P09429 215 aaKnown RBP13.88□□□□□ -0.19
TRIM25-205ENST00000572021 RPS6KB1P23443 525 aa13.88□□□□□ -0.19
TRIM25-205ENST00000572021 ADORA2AP29274 412 aa13.88□□□□□ -0.19
TRIM25-205ENST00000572021 GRK4P32298 578 aa13.88□□□□□ -0.19
TRIM25-205ENST00000572021 LIFRP42702 1097 aa13.88□□□□□ -0.19
TRIM25-205ENST00000572021 PRMT2P55345 433 aa13.88□□□□□ -0.19
TRIM25-205ENST00000572021 FGD1P98174 961 aa13.88□□□□□ -0.19
TRIM25-205ENST00000572021 GRB14Q14449 540 aa13.88□□□□□ -0.19
TRIM25-205ENST00000572021 Q6ZUG5 572 aa13.88□□□□□ -0.19
TRIM25-205ENST00000572021 PIBF1Q8WXW3 757 aa13.88□□□□□ -0.19
TRIM25-205ENST00000572021 USP6NLQ92738 828 aa13.88□□□□□ -0.19
TRIM25-205ENST00000572021 MMP19Q99542 508 aa13.88□□□□□ -0.19
TRIM25-205ENST00000572021 MTA3Q9BTC8 594 aa13.88□□□□□ -0.19
TRIM25-205ENST00000572021 BIN2Q9UBW5 565 aaPredicted RBP13.88□□□□□ -0.19
TRIM25-205ENST00000572021 CCPG1Q9ULG6 757 aa13.88□□□□□ -0.19
TRIM25-205ENST00000572021 NAP1L2Q9ULW6 460 aaPredicted RBP13.88□□□□□ -0.19
TRIM25-205ENST00000572021 BRCA2P51587 3418 aa13.87□□□□□ -0.19
TRIM25-205ENST00000572021 COBLO75128 1261 aa13.87□□□□□ -0.19
TRIM25-205ENST00000572021 FCER1AP12319 257 aa13.87□□□□□ -0.19
TRIM25-205ENST00000572021 APOBRQ0VD83 1088 aa13.87□□□□□ -0.19
TRIM25-205ENST00000572021 TRIM32Q13049 653 aa13.87□□□□□ -0.19
TRIM25-205ENST00000572021 MAP2K5Q13163 448 aa13.87□□□□□ -0.19
TRIM25-205ENST00000572021 CDC37Q16543 378 aaPredicted RBP13.87□□□□□ -0.19
TRIM25-205ENST00000572021 MUM1L1Q5H9M0 696 aa13.87□□□□□ -0.19
TRIM25-205ENST00000572021 MICU3Q86XE3 530 aa13.87□□□□□ -0.19
TRIM25-205ENST00000572021 CMTR1Q8N1G2 835 aaKnown RBP13.87□□□□□ -0.19
TRIM25-205ENST00000572021 NPLOC4Q8TAT6 608 aa13.87□□□□□ -0.19
TRIM25-205ENST00000572021 SOCS4Q8WXH5 440 aa13.87□□□□□ -0.19
TRIM25-205ENST00000572021 LARP6Q9BRS8 491 aaKnown RBP13.87□□□□□ -0.19
TRIM25-205ENST00000572021 JMJD4Q9H9V9 463 aa13.87□□□□□ -0.19
TRIM25-205ENST00000572021 RNF146Q9NTX7 359 aa13.87□□□□□ -0.19
TRIM25-205ENST00000572021 FLRT1Q9NZU1 646 aa13.87□□□□□ -0.19
TRIM25-205ENST00000572021 DAXXQ9UER7 740 aaPredicted RBP13.87□□□□□ -0.19
TRIM25-205ENST00000572021 SLC12A7Q9Y666 1083 aa13.87□□□□□ -0.19
TRIM25-205ENST00000572021 WDR19Q8NEZ3 1342 aa13.87□□□□□ -0.19
TRIM25-205ENST00000572021 KLF18A0A0U1RQI7 1052 aa13.86□□□□□ -0.19
TRIM25-205ENST00000572021 DDAH1O94760 285 aa13.86□□□□□ -0.19
TRIM25-205ENST00000572021 ICAM1P05362 532 aa13.86□□□□□ -0.19
TRIM25-205ENST00000572021 FDX1P10109 184 aa13.86□□□□□ -0.19
TRIM25-205ENST00000572021 PSMA5P28066 241 aa13.86□□□□□ -0.19
TRIM25-205ENST00000572021 RGS2P41220 211 aa13.86□□□□□ -0.19
TRIM25-205ENST00000572021 RBM25P49756 843 aaKnown RBP13.86□□□□□ -0.19
TRIM25-205ENST00000572021 OAZ1P54368 228 aa13.86□□□□□ -0.19
TRIM25-205ENST00000572021 IRF5Q13568 498 aa13.86□□□□□ -0.19
TRIM25-205ENST00000572021 BECN1Q14457 450 aa13.86□□□□□ -0.19
TRIM25-205ENST00000572021 USH1GQ495M9 461 aa13.86□□□□□ -0.19
TRIM25-205ENST00000572021 APOA5Q6Q788 366 aa13.86□□□□□ -0.19
TRIM25-205ENST00000572021 RUFY3Q7L099 469 aa13.86□□□□□ -0.19
TRIM25-205ENST00000572021 DPP9Q86TI2 863 aa13.86□□□□□ -0.19
TRIM25-205ENST00000572021 TMTC2Q8N394 836 aa13.86□□□□□ -0.19
TRIM25-205ENST00000572021 TRIB2Q92519 343 aa13.86□□□□□ -0.19
TRIM25-205ENST00000572021 BRF1Q92994 677 aa13.86□□□□□ -0.19
TRIM25-205ENST00000572021 TRERF1Q96PN7 1200 aa13.86□□□□□ -0.19
TRIM25-205ENST00000572021 C22orf23Q9BZE7 217 aa13.86□□□□□ -0.19
TRIM25-205ENST00000572021 ZSWIM6Q9HCJ5 1215 aa13.86□□□□□ -0.19
TRIM25-205ENST00000572021 PLXNA1Q9UIW2 1896 aa13.86□□□□□ -0.19
TRIM25-205ENST00000572021 CYTH3O43739 400 aa13.85□□□□□ -0.19
TRIM25-205ENST00000572021 STRNO43815 780 aa13.85□□□□□ -0.19
TRIM25-205ENST00000572021 PLEKHA8P1O95397 391 aa13.85□□□□□ -0.19
TRIM25-205ENST00000572021 INHAP05111 366 aa13.85□□□□□ -0.19
TRIM25-205ENST00000572021 KCTD2Q14681 263 aa13.85□□□□□ -0.19
TRIM25-205ENST00000572021 MTFR1Q15390 333 aa13.85□□□□□ -0.19
TRIM25-205ENST00000572021 QRICH1Q2TAL8 776 aa13.85□□□□□ -0.19
TRIM25-205ENST00000572021 SGMS1Q86VZ5 419 aa13.85□□□□□ -0.19
TRIM25-205ENST00000572021 HOMER1Q86YM7 354 aa13.85□□□□□ -0.19
TRIM25-205ENST00000572021 CCDC82Q8N4S0 544 aa13.85□□□□□ -0.19
TRIM25-205ENST00000572021 SLAIN1Q8ND83 568 aa13.85□□□□□ -0.19
TRIM25-205ENST00000572021 CTCFLQ8NI51 663 aaPredicted RBP13.85□□□□□ -0.19
TRIM25-205ENST00000572021 APBA2Q99767 749 aa13.85□□□□□ -0.19
TRIM25-205ENST00000572021 CYP46A1Q9Y6A2 500 aa13.85□□□□□ -0.19
TRIM25-205ENST00000572021 ZNF236Q9UL36 1845 aa13.85□□□□□ -0.19
TRIM25-205ENST00000572021 ANKRD35Q8N283 1001 aa13.84□□□□□ -0.19
TRIM25-205ENST00000572021 ARMC5Q96C12 935 aa13.84□□□□□ -0.19
TRIM25-205ENST00000572021 ZNF333Q96JL9 665 aa13.84□□□□□ -0.19
TRIM25-205ENST00000572021 PIGSQ96S52 555 aa13.84□□□□□ -0.19
TRIM25-205ENST00000572021 hCG_1642624A0A1W2PR95 340 aa13.83□□□□□ -0.19
TRIM25-205ENST00000572021 NFIBO00712 420 aa13.83□□□□□ -0.19
TRIM25-205ENST00000572021 ZBTB43O43298 467 aa13.83□□□□□ -0.19
TRIM25-205ENST00000572021 PPP1R11O60927 126 aaPredicted RBP13.83□□□□□ -0.19
TRIM25-205ENST00000572021 COPB2P35606 906 aa13.83□□□□□ -0.19
TRIM25-205ENST00000572021 SOX10P56693 466 aa13.83□□□□□ -0.19
TRIM25-205ENST00000572021 TOB2Q14106 344 aaPredicted RBP13.83□□□□□ -0.19
TRIM25-205ENST00000572021 NSMFQ6X4W1 530 aa13.83□□□□□ -0.19
TRIM25-205ENST00000572021 SYNE3Q6ZMZ3 975 aa13.83□□□□□ -0.19
TRIM25-205ENST00000572021 SRBD1Q8N5C6 995 aaKnown RBP13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms