RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 ZBED6P86452 979 aa18.75■□□□□ 0.59
LITAF-209ENST00000571688 CYP27A1Q02318 531 aa18.75■□□□□ 0.59
LITAF-209ENST00000571688 APBA1Q02410 837 aa18.75■□□□□ 0.59
LITAF-209ENST00000571688 KCTD16Q68DU8 428 aa18.75■□□□□ 0.59
LITAF-209ENST00000571688 IQCKQ8N0W5 287 aa18.75■□□□□ 0.59
LITAF-209ENST00000571688 TMTC2Q8N394 836 aa18.75■□□□□ 0.59
LITAF-209ENST00000571688 RETREG2Q8NC44 543 aa18.75■□□□□ 0.59
LITAF-209ENST00000571688 NUP133Q8WUM0 1156 aa18.75■□□□□ 0.59
LITAF-209ENST00000571688 NUP58Q9BVL2 599 aa18.75■□□□□ 0.59
LITAF-209ENST00000571688 CAPN6Q9Y6Q1 641 aa18.75■□□□□ 0.59
LITAF-209ENST00000571688 PES1O00541 588 aaKnown RBP18.75■□□□□ 0.59
LITAF-209ENST00000571688 ZNF263O14978 683 aa18.75■□□□□ 0.59
LITAF-209ENST00000571688 TACC1O75410 805 aa18.75■□□□□ 0.59
LITAF-209ENST00000571688 CLSTN1O94985 981 aa18.75■□□□□ 0.59
LITAF-209ENST00000571688 KRT14P02533 472 aa18.75■□□□□ 0.59
LITAF-209ENST00000571688 RDXP35241 583 aaKnown RBP18.75■□□□□ 0.59
LITAF-209ENST00000571688 CDK17Q00537 523 aa18.75■□□□□ 0.59
LITAF-209ENST00000571688 PTGDRQ13258 359 aa18.75■□□□□ 0.59
LITAF-209ENST00000571688 PTGISQ16647 500 aa18.75■□□□□ 0.59
LITAF-209ENST00000571688 TTC38Q5R3I4 469 aa18.75■□□□□ 0.59
LITAF-209ENST00000571688 TNFRSF25Q93038 417 aa18.75■□□□□ 0.59
LITAF-209ENST00000571688 ZNF622Q969S3 477 aaKnown RBP eCLIP18.75■□□□□ 0.59
LITAF-209ENST00000571688 OSBPL9Q96SU4 736 aa18.75■□□□□ 0.59
LITAF-209ENST00000571688 LRWD1Q9UFC0 647 aa18.75■□□□□ 0.59
LITAF-209ENST00000571688 ERICH2A1L162 156 aa18.74■□□□□ 0.59
LITAF-209ENST00000571688 PPP1R37O75864 691 aa18.74■□□□□ 0.59
LITAF-209ENST00000571688 TCP1P17987 556 aaKnown RBP18.74■□□□□ 0.59
LITAF-209ENST00000571688 ELF1P32519 619 aa18.74■□□□□ 0.59
LITAF-209ENST00000571688 PMS1P54277 932 aaKnown RBP18.74■□□□□ 0.59
LITAF-209ENST00000571688 WLSQ5T9L3 541 aa18.74■□□□□ 0.59
LITAF-209ENST00000571688 SMCR8Q8TEV9 937 aaPredicted RBP18.74■□□□□ 0.59
LITAF-209ENST00000571688 NUTM2BA6NNL0 878 aaPredicted RBP18.74■□□□□ 0.59
LITAF-209ENST00000571688 NUTM2EB1AL46 878 aaPredicted RBP18.74■□□□□ 0.59
LITAF-209ENST00000571688 CYP27B1O15528 508 aa18.74■□□□□ 0.59
LITAF-209ENST00000571688 MYCNP04198 464 aaPredicted RBP18.74■□□□□ 0.59
LITAF-209ENST00000571688 GUCY1A3Q02108 690 aa18.74■□□□□ 0.59
LITAF-209ENST00000571688 CCDC40Q4G0X9 1142 aa18.74■□□□□ 0.59
LITAF-209ENST00000571688 RRP12Q5JTH9 1297 aaKnown RBP18.74■□□□□ 0.59
LITAF-209ENST00000571688 METTL24Q5JXM2 366 aa18.74■□□□□ 0.59
LITAF-209ENST00000571688 CCDC13Q8IYE1 715 aa18.74■□□□□ 0.59
LITAF-209ENST00000571688 CCDC85AQ96PX6 553 aaPredicted RBP18.74■□□□□ 0.59
LITAF-209ENST00000571688 SH2D4AQ9H788 454 aa18.74■□□□□ 0.59
LITAF-209ENST00000571688 HYOU1Q9Y4L1 999 aa18.74■□□□□ 0.59
LITAF-209ENST00000571688 ZNF233A6NK53 670 aa18.73■□□□□ 0.59
LITAF-209ENST00000571688 SRRM3A6NNA2 597 aaPredicted RBP18.73■□□□□ 0.59
LITAF-209ENST00000571688 TRIM21P19474 475 aaKnown RBP18.73■□□□□ 0.59
LITAF-209ENST00000571688 CD302Q8IX05 232 aa18.73■□□□□ 0.59
LITAF-209ENST00000571688 THEMISQ8N1K5 641 aaPredicted RBP18.73■□□□□ 0.59
LITAF-209ENST00000571688 MYCBPAPQ8TBZ2 947 aa18.73■□□□□ 0.59
LITAF-209ENST00000571688 ISCA1Q9BUE6 129 aa18.73■□□□□ 0.59
LITAF-209ENST00000571688 EXOC1Q9NV70 894 aa18.73■□□□□ 0.59
LITAF-209ENST00000571688 RIPOR2Q9Y4F9 1068 aa18.73■□□□□ 0.59
LITAF-209ENST00000571688 B4DLN1 442 aa18.73■□□□□ 0.59
LITAF-209ENST00000571688 MATR3P43243 847 aaKnown RBP eCLIP18.73■□□□□ 0.59
LITAF-209ENST00000571688 DRP2Q13474 957 aa18.73■□□□□ 0.59
LITAF-209ENST00000571688 C6orf89Q6UWU4 347 aa18.73■□□□□ 0.59
LITAF-209ENST00000571688 EP400NLQ6ZTU2 488 aa18.73■□□□□ 0.59
LITAF-209ENST00000571688 NLRP14Q86W24 1093 aa18.73■□□□□ 0.59
LITAF-209ENST00000571688 CSF1RP07333 972 aa18.72■□□□□ 0.59
LITAF-209ENST00000571688 NR1D1P20393 614 aa18.72■□□□□ 0.59
LITAF-209ENST00000571688 CABP4P57796 275 aa18.72■□□□□ 0.59
LITAF-209ENST00000571688 IFIT5Q13325 482 aaKnown RBP18.72■□□□□ 0.59
LITAF-209ENST00000571688 GLE1Q53GS7 698 aaKnown RBP18.72■□□□□ 0.59
LITAF-209ENST00000571688 C8orf74Q6P047 294 aa18.72■□□□□ 0.59
LITAF-209ENST00000571688 NFRKBQ6P4R8 1299 aa18.72■□□□□ 0.59
LITAF-209ENST00000571688 C1orf131Q8NDD1 294 aaKnown RBP18.72■□□□□ 0.59
LITAF-209ENST00000571688 CCDC43Q96MW1 224 aaKnown RBP18.72■□□□□ 0.59
LITAF-209ENST00000571688 CCT8L2Q96SF2 557 aa18.72■□□□□ 0.59
LITAF-209ENST00000571688 NLRP2Q9NX02 1062 aa18.72■□□□□ 0.59
LITAF-209ENST00000571688 SPATA31A3Q5VYP0 1347 aa18.72■□□□□ 0.59
LITAF-209ENST00000571688 GSG1L2A8MUP6 293 aa18.72■□□□□ 0.59
LITAF-209ENST00000571688 USO1O60763 962 aaKnown RBP18.72■□□□□ 0.59
LITAF-209ENST00000571688 MBD4O95243 580 aa18.72■□□□□ 0.59
LITAF-209ENST00000571688 KLK7P49862 253 aa18.72■□□□□ 0.59
LITAF-209ENST00000571688 HDLBPQ00341 1268 aaKnown RBP18.72■□□□□ 0.59
LITAF-209ENST00000571688 NPY5RQ15761 445 aa18.72■□□□□ 0.59
LITAF-209ENST00000571688 CCDC96Q2M329 555 aa18.72■□□□□ 0.59
LITAF-209ENST00000571688 CFAP58Q5T655 872 aa18.72■□□□□ 0.59
LITAF-209ENST00000571688 RNF187Q5TA31 235 aaPredicted RBP18.72■□□□□ 0.59
LITAF-209ENST00000571688 MREGQ8N565 214 aa18.72■□□□□ 0.59
LITAF-209ENST00000571688 PLA2G12BQ9BX93 195 aa18.72■□□□□ 0.59
LITAF-209ENST00000571688 SMARCAL1Q9NZC9 954 aa18.72■□□□□ 0.59
LITAF-209ENST00000571688 DOCK2Q92608 1830 aa18.72■□□□□ 0.59
LITAF-209ENST00000571688 PRDM1O75626 825 aa18.71■□□□□ 0.59
LITAF-209ENST00000571688 FUT2Q10981 343 aa18.71■□□□□ 0.59
LITAF-209ENST00000571688 PPP2R5BQ15173 497 aa18.71■□□□□ 0.59
LITAF-209ENST00000571688 SPA17Q15506 151 aa18.71■□□□□ 0.59
LITAF-209ENST00000571688 IL17AQ16552 155 aa18.71■□□□□ 0.59
LITAF-209ENST00000571688 MLXIPQ9HAP2 919 aa18.71■□□□□ 0.59
LITAF-209ENST00000571688 SLC40A1Q9NP59 571 aa18.71■□□□□ 0.59
LITAF-209ENST00000571688 GDF3Q9NR23 364 aa18.71■□□□□ 0.59
LITAF-209ENST00000571688 EHD2Q9NZN4 543 aa18.71■□□□□ 0.59
LITAF-209ENST00000571688 MAGEC2Q9UBF1 373 aaPredicted RBP18.71■□□□□ 0.59
LITAF-209ENST00000571688 A0A1W2PQJ5 194 aa18.71■□□□□ 0.59
LITAF-209ENST00000571688 MOCS3O95396 460 aa18.71■□□□□ 0.59
LITAF-209ENST00000571688 FAM107AO95990 144 aa18.71■□□□□ 0.59
LITAF-209ENST00000571688 ARID4AP29374 1257 aaPredicted RBP18.71■□□□□ 0.59
LITAF-209ENST00000571688 MDH1P40925 334 aaKnown RBP18.71■□□□□ 0.59
LITAF-209ENST00000571688 CCDC181Q5TID7 509 aa18.71■□□□□ 0.59
LITAF-209ENST00000571688 KRT26Q7Z3Y9 468 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms