RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 ZNF543Q08ER8 600 aa18.29■□□□□ 0.52
AC009088.3-201ENST00000563605 PRPF38BQ5VTL8 546 aaKnown RBP18.29■□□□□ 0.52
AC009088.3-201ENST00000563605 NECAB2Q7Z6G3 386 aa18.29■□□□□ 0.52
AC009088.3-201ENST00000563605 MAP4K1Q92918 833 aa18.29■□□□□ 0.52
AC009088.3-201ENST00000563605 TINF2Q9BSI4 451 aa18.29■□□□□ 0.52
AC009088.3-201ENST00000563605 ESYT1Q9BSJ8 1104 aa18.29■□□□□ 0.52
AC009088.3-201ENST00000563605 HTATIP2Q9BUP3 242 aa18.29■□□□□ 0.52
AC009088.3-201ENST00000563605 UBA5Q9GZZ9 404 aa18.29■□□□□ 0.52
AC009088.3-201ENST00000563605 CPVLQ9H3G5 476 aa18.29■□□□□ 0.52
AC009088.3-201ENST00000563605 RNF146Q9NTX7 359 aa18.29■□□□□ 0.52
AC009088.3-201ENST00000563605 FBXO40Q9UH90 709 aa18.29■□□□□ 0.52
AC009088.3-201ENST00000563605 DDX20Q9UHI6 824 aaKnown RBP18.29■□□□□ 0.52
AC009088.3-201ENST00000563605 CCPG1Q9ULG6 757 aa18.29■□□□□ 0.52
AC009088.3-201ENST00000563605 E7EWF7 191 aa18.28■□□□□ 0.52
AC009088.3-201ENST00000563605 IGHA2P01877 340 aa18.28■□□□□ 0.52
AC009088.3-201ENST00000563605 CYBAP13498 195 aa18.28■□□□□ 0.52
AC009088.3-201ENST00000563605 CAPN2P17655 700 aa18.28■□□□□ 0.52
AC009088.3-201ENST00000563605 NT5C2P49902 561 aa18.28■□□□□ 0.52
AC009088.3-201ENST00000563605 BMP2KLQ5H9B9 411 aa18.28■□□□□ 0.52
AC009088.3-201ENST00000563605 BTNL9Q6UXG8 535 aa18.28■□□□□ 0.52
AC009088.3-201ENST00000563605 CHST3Q7LGC8 479 aa18.28■□□□□ 0.52
AC009088.3-201ENST00000563605 RALYLQ86SE5 291 aaKnown RBP18.28■□□□□ 0.52
AC009088.3-201ENST00000563605 ANKLE1Q8NAG6 615 aa18.28■□□□□ 0.52
AC009088.3-201ENST00000563605 ANKS1AQ92625 1134 aa18.28■□□□□ 0.52
AC009088.3-201ENST00000563605 ACAD9Q9H845 621 aa18.28■□□□□ 0.52
AC009088.3-201ENST00000563605 DIS3Q9Y2L1 958 aaKnown RBP18.28■□□□□ 0.52
AC009088.3-201ENST00000563605 MNX1P50219 401 aaPredicted RBP18.27■□□□□ 0.52
AC009088.3-201ENST00000563605 MUM1L1Q5H9M0 696 aa18.27■□□□□ 0.52
AC009088.3-201ENST00000563605 IFIT1BQ5T764 474 aaKnown RBP18.27■□□□□ 0.52
AC009088.3-201ENST00000563605 RANBP17Q9H2T7 1088 aaKnown RBP18.27■□□□□ 0.52
AC009088.3-201ENST00000563605 ANO2Q9NQ90 1003 aa18.27■□□□□ 0.52
AC009088.3-201ENST00000563605 DNAJC25-GNG10A0A024R161 153 aa18.26■□□□□ 0.51
AC009088.3-201ENST00000563605 POTEB2H3BUK9 544 aa18.26■□□□□ 0.51
AC009088.3-201ENST00000563605 IFIT3O14879 490 aaKnown RBP18.26■□□□□ 0.51
AC009088.3-201ENST00000563605 SNHG28P0DPA3 235 aa18.26■□□□□ 0.51
AC009088.3-201ENST00000563605 CNTN2Q02246 1040 aa18.26■□□□□ 0.51
AC009088.3-201ENST00000563605 TKFCQ3LXA3 575 aa18.26■□□□□ 0.51
AC009088.3-201ENST00000563605 STOX1Q6ZVD7 989 aa18.26■□□□□ 0.51
AC009088.3-201ENST00000563605 NCOA7Q8NI08 942 aa18.26■□□□□ 0.51
AC009088.3-201ENST00000563605 LSG1Q9H089 658 aaKnown RBP18.26■□□□□ 0.51
AC009088.3-201ENST00000563605 C11orf49Q9H6J7 331 aa18.26■□□□□ 0.51
AC009088.3-201ENST00000563605 VAT1LQ9HCJ6 419 aa18.26■□□□□ 0.51
AC009088.3-201ENST00000563605 H0YGN5 161 aa18.25■□□□□ 0.51
AC009088.3-201ENST00000563605 SEPT4O43236 478 aa18.25■□□□□ 0.51
AC009088.3-201ENST00000563605 DHX16O60231 1041 aaKnown RBP18.25■□□□□ 0.51
AC009088.3-201ENST00000563605 ICAM1P05362 532 aa18.25■□□□□ 0.51
AC009088.3-201ENST00000563605 GPATCH4Q5T3I0 446 aaKnown RBP18.25■□□□□ 0.51
AC009088.3-201ENST00000563605 NSMFQ6X4W1 530 aa18.25■□□□□ 0.51
AC009088.3-201ENST00000563605 A1CFQ9NQ94 594 aaKnown RBP18.25■□□□□ 0.51
AC009088.3-201ENST00000563605 CNPY2Q9Y2B0 182 aa18.25■□□□□ 0.51
AC009088.3-201ENST00000563605 MKI67P46013 3256 aaKnown RBP18.24■□□□□ 0.51
AC009088.3-201ENST00000563605 ZNFX1Q9P2E3 1918 aaKnown RBP18.24■□□□□ 0.51
AC009088.3-201ENST00000563605 ERICH2A1L162 156 aa18.24■□□□□ 0.51
AC009088.3-201ENST00000563605 EVI5O60447 810 aa18.24■□□□□ 0.51
AC009088.3-201ENST00000563605 MSCO60682 206 aa18.24■□□□□ 0.51
AC009088.3-201ENST00000563605 PARP1P09874 1014 aaKnown RBP18.24■□□□□ 0.51
AC009088.3-201ENST00000563605 SEC23AQ15436 765 aa18.24■□□□□ 0.51
AC009088.3-201ENST00000563605 GJC2Q5T442 439 aaPredicted RBP18.24■□□□□ 0.51
AC009088.3-201ENST00000563605 ZNF236Q9UL36 1845 aa18.23■□□□□ 0.51
AC009088.3-201ENST00000563605 SNAI1O95863 264 aaPredicted RBP18.23■□□□□ 0.51
AC009088.3-201ENST00000563605 ERICH6BQ5W0A0 696 aa18.23■□□□□ 0.51
AC009088.3-201ENST00000563605 CASC1Q6TDU7 716 aa18.23■□□□□ 0.51
AC009088.3-201ENST00000563605 PURBQ96QR8 312 aaKnown RBP18.23■□□□□ 0.51
AC009088.3-201ENST00000563605 SENP6Q9GZR1 1112 aaPredicted RBP18.23■□□□□ 0.51
AC009088.3-201ENST00000563605 SENP2Q9HC62 589 aa18.23■□□□□ 0.51
AC009088.3-201ENST00000563605 ZHX1Q9UKY1 873 aaPredicted RBP18.23■□□□□ 0.51
AC009088.3-201ENST00000563605 LAMA4Q16363 1823 aa18.23■□□□□ 0.51
AC009088.3-201ENST00000563605 SOWAHBA6NEL2 793 aa18.22■□□□□ 0.51
AC009088.3-201ENST00000563605 SLC27A2O14975 620 aa18.22■□□□□ 0.51
AC009088.3-201ENST00000563605 CDC45O75419 566 aa18.22■□□□□ 0.51
AC009088.3-201ENST00000563605 ZNF865P0CJ78 1059 aaPredicted RBP18.22■□□□□ 0.51
AC009088.3-201ENST00000563605 WTAPQ15007 396 aa18.22■□□□□ 0.51
AC009088.3-201ENST00000563605 USH1GQ495M9 461 aa18.22■□□□□ 0.51
AC009088.3-201ENST00000563605 ASPRV1Q53RT3 343 aa18.22■□□□□ 0.51
AC009088.3-201ENST00000563605 TMEM67Q5HYA8 995 aa18.22■□□□□ 0.51
AC009088.3-201ENST00000563605 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.22■□□□□ 0.51
AC009088.3-201ENST00000563605 ADGRF4Q8IZF3 695 aa18.22■□□□□ 0.51
AC009088.3-201ENST00000563605 STAG2Q8N3U4 1231 aa18.22■□□□□ 0.51
AC009088.3-201ENST00000563605 ARRDC4Q8NCT1 418 aa18.22■□□□□ 0.51
AC009088.3-201ENST00000563605 FGD4Q96M96 766 aa18.22■□□□□ 0.51
AC009088.3-201ENST00000563605 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.22■□□□□ 0.51
AC009088.3-201ENST00000563605 PPP4R2Q9NY27 417 aa18.22■□□□□ 0.51
AC009088.3-201ENST00000563605 NR2E3Q9Y5X4 410 aa18.22■□□□□ 0.51
AC009088.3-201ENST00000563605 DDX49Q9Y6V7 483 aaKnown RBP18.22■□□□□ 0.51
AC009088.3-201ENST00000563605 PTPDC1A2A3K4 754 aa18.21■□□□□ 0.51
AC009088.3-201ENST00000563605 NFIBO00712 420 aa18.21■□□□□ 0.51
AC009088.3-201ENST00000563605 RARBP10826 455 aa18.21■□□□□ 0.51
AC009088.3-201ENST00000563605 BAATQ14032 418 aaPredicted RBP18.21■□□□□ 0.51
AC009088.3-201ENST00000563605 SART3Q15020 963 aaKnown RBP18.21■□□□□ 0.51
AC009088.3-201ENST00000563605 CREB3L3Q68CJ9 461 aa18.21■□□□□ 0.51
AC009088.3-201ENST00000563605 MAMDC4Q6UXC1 1216 aa18.21■□□□□ 0.51
AC009088.3-201ENST00000563605 ZNF467Q7Z7K2 595 aaPredicted RBP18.21■□□□□ 0.51
AC009088.3-201ENST00000563605 CCDC144CPQ8IYA2 1237 aa18.21■□□□□ 0.51
AC009088.3-201ENST00000563605 C7orf61Q8IZ16 206 aa18.21■□□□□ 0.51
AC009088.3-201ENST00000563605 MSL3Q8N5Y2 521 aaKnown RBP18.21■□□□□ 0.51
AC009088.3-201ENST00000563605 FAM133AQ8N9E0 248 aa18.21■□□□□ 0.51
AC009088.3-201ENST00000563605 LENG1Q96BZ8 264 aaPredicted RBP18.21■□□□□ 0.51
AC009088.3-201ENST00000563605 CYP39A1Q9NYL5 469 aa18.21■□□□□ 0.51
AC009088.3-201ENST00000563605 NRBP1Q9UHY1 535 aa18.21■□□□□ 0.51
AC009088.3-201ENST00000563605 PFASO15067 1338 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms