RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 MAP4K1Q92918 833 aa22.34■■□□□ 1.17
TRADD-203ENST00000563348 NRBP1Q9UHY1 535 aa22.34■■□□□ 1.17
TRADD-203ENST00000563348 FRMPD2Q68DX3 1309 aaPredicted RBP22.33■■□□□ 1.17
TRADD-203ENST00000563348 CYP21A2P08686 494 aa22.33■■□□□ 1.17
TRADD-203ENST00000563348 SYDE2Q5VT97 1194 aa22.33■■□□□ 1.17
TRADD-203ENST00000563348 CCDC174Q6PII3 467 aa22.33■■□□□ 1.17
TRADD-203ENST00000563348 SKAP1Q86WV1 359 aa22.33■■□□□ 1.17
TRADD-203ENST00000563348 MSL3Q8N5Y2 521 aaKnown RBP22.33■■□□□ 1.17
TRADD-203ENST00000563348 RANBP17Q9H2T7 1088 aaKnown RBP22.33■■□□□ 1.17
TRADD-203ENST00000563348 SEPT4O43236 478 aa22.32■■□□□ 1.16
TRADD-203ENST00000563348 BMP2KLQ5H9B9 411 aa22.32■■□□□ 1.16
TRADD-203ENST00000563348 ENAHQ8N8S7 591 aaPredicted RBP22.32■■□□□ 1.16
TRADD-203ENST00000563348 PNMA1Q8ND90 353 aa22.32■■□□□ 1.16
TRADD-203ENST00000563348 TRERF1Q96PN7 1200 aa22.32■■□□□ 1.16
TRADD-203ENST00000563348 C11orf49Q9H6J7 331 aa22.32■■□□□ 1.16
TRADD-203ENST00000563348 ACAD9Q9H845 621 aa22.32■■□□□ 1.16
TRADD-203ENST00000563348 KAT14Q9H8E8 782 aa22.32■■□□□ 1.16
TRADD-203ENST00000563348 HOMER2Q9NSB8 354 aa22.32■■□□□ 1.16
TRADD-203ENST00000563348 RNF146Q9NTX7 359 aa22.32■■□□□ 1.16
TRADD-203ENST00000563348 ICAM1P05362 532 aa22.31■■□□□ 1.16
TRADD-203ENST00000563348 ALAS1P13196 640 aa22.31■■□□□ 1.16
TRADD-203ENST00000563348 TRDNQ13061 729 aa22.31■■□□□ 1.16
TRADD-203ENST00000563348 GPATCH4Q5T3I0 446 aaKnown RBP22.31■■□□□ 1.16
TRADD-203ENST00000563348 MAMDC4Q6UXC1 1216 aa22.31■■□□□ 1.16
TRADD-203ENST00000563348 ZNF467Q7Z7K2 595 aaPredicted RBP22.31■■□□□ 1.16
TRADD-203ENST00000563348 CCDC136Q96JN2 1154 aa22.31■■□□□ 1.16
TRADD-203ENST00000563348 UBAC1Q9BSL1 405 aa22.31■■□□□ 1.16
TRADD-203ENST00000563348 LAMA4Q16363 1823 aa22.31■■□□□ 1.16
TRADD-203ENST00000563348 TNKSO95271 1327 aa22.31■■□□□ 1.16
TRADD-203ENST00000563348 H0YGN5 161 aa22.3■■□□□ 1.16
TRADD-203ENST00000563348 KIAA1211Q6ZU35 1233 aa22.3■■□□□ 1.16
TRADD-203ENST00000563348 CCPG1Q9ULG6 757 aa22.3■■□□□ 1.16
TRADD-203ENST00000563348 NR2E3Q9Y5X4 410 aa22.3■■□□□ 1.16
TRADD-203ENST00000563348 COL6A1P12109 1028 aa22.29■■□□□ 1.16
TRADD-203ENST00000563348 CYB5R4Q7L1T6 521 aa22.29■■□□□ 1.16
TRADD-203ENST00000563348 ESYT1Q9BSJ8 1104 aa22.29■■□□□ 1.16
TRADD-203ENST00000563348 A1CFQ9NQ94 594 aaKnown RBP22.29■■□□□ 1.16
TRADD-203ENST00000563348 SYNGAP1Q96PV0 1343 aa22.29■■□□□ 1.16
TRADD-203ENST00000563348 E7EWF7 191 aa22.28■■□□□ 1.16
TRADD-203ENST00000563348 POTEB2H3BUK9 544 aa22.28■■□□□ 1.16
TRADD-203ENST00000563348 EVI5O60447 810 aa22.28■■□□□ 1.16
TRADD-203ENST00000563348 SNAI1O95863 264 aaPredicted RBP22.28■■□□□ 1.16
TRADD-203ENST00000563348 ZNF865P0CJ78 1059 aaPredicted RBP22.28■■□□□ 1.16
TRADD-203ENST00000563348 GOLGA8HP0CJ92 632 aa22.28■■□□□ 1.16
TRADD-203ENST00000563348 TAL1P17542 331 aaPredicted RBP22.28■■□□□ 1.16
TRADD-203ENST00000563348 SEC23AQ15436 765 aa22.28■■□□□ 1.16
TRADD-203ENST00000563348 FAM133AQ8N9E0 248 aa22.28■■□□□ 1.16
TRADD-203ENST00000563348 ARRDC4Q8NCT1 418 aa22.28■■□□□ 1.16
TRADD-203ENST00000563348 FGD4Q96M96 766 aa22.28■■□□□ 1.16
TRADD-203ENST00000563348 LSG1Q9H089 658 aaKnown RBP22.28■■□□□ 1.16
TRADD-203ENST00000563348 PNMA2Q9UL42 364 aa22.28■■□□□ 1.16
TRADD-203ENST00000563348 CNPY2Q9Y2B0 182 aa22.28■■□□□ 1.16
TRADD-203ENST00000563348 RBM8AQ9Y5S9 174 aaKnown RBP22.28■■□□□ 1.16
TRADD-203ENST00000563348 TAF6LQ9Y6J9 622 aa22.28■■□□□ 1.16
TRADD-203ENST00000563348 CNTN2Q02246 1040 aa22.27■■□□□ 1.16
TRADD-203ENST00000563348 MUM1L1Q5H9M0 696 aa22.27■■□□□ 1.16
TRADD-203ENST00000563348 IFIT1BQ5T764 474 aaKnown RBP22.27■■□□□ 1.16
TRADD-203ENST00000563348 ANO1Q5XXA6 986 aa22.27■■□□□ 1.16
TRADD-203ENST00000563348 UBA5Q9GZZ9 404 aa22.27■■□□□ 1.16
TRADD-203ENST00000563348 PFASO15067 1338 aa22.27■■□□□ 1.16
TRADD-203ENST00000563348 STOX1Q6ZVD7 989 aa22.26■■□□□ 1.15
TRADD-203ENST00000563348 RALYLQ86SE5 291 aaKnown RBP22.26■■□□□ 1.15
TRADD-203ENST00000563348 NCOA7Q8NI08 942 aa22.26■■□□□ 1.15
TRADD-203ENST00000563348 SMCHD1A6NHR9 2005 aa22.26■■□□□ 1.15
TRADD-203ENST00000563348 DNM1LO00429 736 aa22.25■■□□□ 1.15
TRADD-203ENST00000563348 NEFLP07196 543 aa22.25■■□□□ 1.15
TRADD-203ENST00000563348 ASPRV1Q53RT3 343 aa22.25■■□□□ 1.15
TRADD-203ENST00000563348 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.25■■□□□ 1.15
TRADD-203ENST00000563348 CYP39A1Q9NYL5 469 aa22.25■■□□□ 1.15
TRADD-203ENST00000563348 PLXNA1Q9UIW2 1896 aa22.24■■□□□ 1.15
TRADD-203ENST00000563348 SOWAHBA6NEL2 793 aa22.24■■□□□ 1.15
TRADD-203ENST00000563348 IFIT3O14879 490 aaKnown RBP22.24■■□□□ 1.15
TRADD-203ENST00000563348 PARP1P09874 1014 aaKnown RBP22.24■■□□□ 1.15
TRADD-203ENST00000563348 RARBP10826 455 aa22.24■■□□□ 1.15
TRADD-203ENST00000563348 AKR1A1P14550 325 aa22.24■■□□□ 1.15
TRADD-203ENST00000563348 GJC2Q5T442 439 aaPredicted RBP22.24■■□□□ 1.15
TRADD-203ENST00000563348 CPVLQ9H3G5 476 aa22.24■■□□□ 1.15
TRADD-203ENST00000563348 ABHD16BQ9H3Z7 469 aa22.24■■□□□ 1.15
TRADD-203ENST00000563348 WDR19Q8NEZ3 1342 aa22.24■■□□□ 1.15
TRADD-203ENST00000563348 ACVR2BQ13705 512 aa22.23■■□□□ 1.15
TRADD-203ENST00000563348 NSMFQ6X4W1 530 aa22.23■■□□□ 1.15
TRADD-203ENST00000563348 ARMCX2Q7L311 632 aa22.23■■□□□ 1.15
TRADD-203ENST00000563348 CCDC144CPQ8IYA2 1237 aa22.23■■□□□ 1.15
TRADD-203ENST00000563348 SENP6Q9GZR1 1112 aaPredicted RBP22.23■■□□□ 1.15
TRADD-203ENST00000563348 FAM184BQ9ULE4 1060 aa22.23■■□□□ 1.15
TRADD-203ENST00000563348 ERICH2A1L162 156 aa22.22■■□□□ 1.15
TRADD-203ENST00000563348 ASB14A6NK59 587 aa22.22■■□□□ 1.15
TRADD-203ENST00000563348 LRRC41Q15345 812 aa22.22■■□□□ 1.15
TRADD-203ENST00000563348 ADGRF4Q8IZF3 695 aa22.22■■□□□ 1.15
TRADD-203ENST00000563348 CLEC4DQ8WXI8 215 aa22.22■■□□□ 1.15
TRADD-203ENST00000563348 ANO2Q9NQ90 1003 aa22.22■■□□□ 1.15
TRADD-203ENST00000563348 XPNPEP3Q9NQH7 507 aa22.22■■□□□ 1.15
TRADD-203ENST00000563348 ZHX1Q9UKY1 873 aaPredicted RBP22.22■■□□□ 1.15
TRADD-203ENST00000563348 NFIBO00712 420 aa22.21■■□□□ 1.15
TRADD-203ENST00000563348 SLC27A2O14975 620 aa22.21■■□□□ 1.15
TRADD-203ENST00000563348 BAATQ14032 418 aaPredicted RBP22.21■■□□□ 1.15
TRADD-203ENST00000563348 SART3Q15020 963 aaKnown RBP22.21■■□□□ 1.15
TRADD-203ENST00000563348 NECTIN1Q15223 517 aa22.21■■□□□ 1.15
TRADD-203ENST00000563348 CHST3Q7LGC8 479 aa22.21■■□□□ 1.15
TRADD-203ENST00000563348 MB21D2Q8IYB1 491 aaPredicted RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms