RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 TMPRSS7Q7RTY8 843 aa8.34□□□□□ -1.07
LINC00557-201ENST00000563184 LINC00116Q8NCU8 138 aa8.34□□□□□ -1.07
LINC00557-201ENST00000563184 BCL7CQ8WUZ0 217 aaPredicted RBP8.34□□□□□ -1.07
LINC00557-201ENST00000563184 MISP3Q96FF7 219 aa8.34□□□□□ -1.07
LINC00557-201ENST00000563184 EXOC2Q96KP1 924 aa8.34□□□□□ -1.07
LINC00557-201ENST00000563184 FCRL3Q96P31 734 aaPredicted RBP8.34□□□□□ -1.07
LINC00557-201ENST00000563184 FOXP3Q9BZS1 431 aa8.34□□□□□ -1.07
LINC00557-201ENST00000563184 NKX2-4Q9H2Z4 354 aa8.34□□□□□ -1.07
LINC00557-201ENST00000563184 PCMTD2Q9NV79 361 aa8.34□□□□□ -1.07
LINC00557-201ENST00000563184 TRAV20A0A0B4J274 112 aa8.33□□□□□ -1.08
LINC00557-201ENST00000563184 KIAA1324LA8MWY0 1029 aaPredicted RBP8.33□□□□□ -1.08
LINC00557-201ENST00000563184 ENPP3O14638 875 aa8.33□□□□□ -1.08
LINC00557-201ENST00000563184 CD3EP07766 207 aa8.33□□□□□ -1.08
LINC00557-201ENST00000563184 SYPP08247 313 aa8.33□□□□□ -1.08
LINC00557-201ENST00000563184 FGFR1P11362 822 aa8.33□□□□□ -1.08
LINC00557-201ENST00000563184 IFNGR1P15260 489 aa8.33□□□□□ -1.08
LINC00557-201ENST00000563184 SPINK2P20155 84 aa8.33□□□□□ -1.08
LINC00557-201ENST00000563184 POU4F1Q01851 419 aa8.33□□□□□ -1.08
LINC00557-201ENST00000563184 FAM209AQ5JX71 171 aa8.33□□□□□ -1.08
LINC00557-201ENST00000563184 CWF19L1Q69YN2 538 aaKnown RBP8.33□□□□□ -1.08
LINC00557-201ENST00000563184 SPRED2Q7Z698 418 aa8.33□□□□□ -1.08
LINC00557-201ENST00000563184 DTX1Q86Y01 620 aa8.33□□□□□ -1.08
LINC00557-201ENST00000563184 CREG2Q8IUH2 290 aa8.33□□□□□ -1.08
LINC00557-201ENST00000563184 ASB11Q8WXH4 323 aa8.33□□□□□ -1.08
LINC00557-201ENST00000563184 OSBP2Q969R2 916 aa8.33□□□□□ -1.08
LINC00557-201ENST00000563184 FANCLQ9NW38 375 aa8.33□□□□□ -1.08
LINC00557-201ENST00000563184 TCFL5Q9UL49 500 aa8.33□□□□□ -1.08
LINC00557-201ENST00000563184 STXBP3O00186 592 aa8.32□□□□□ -1.08
LINC00557-201ENST00000563184 AURKAO14965 403 aa8.32□□□□□ -1.08
LINC00557-201ENST00000563184 LTKP29376 864 aa8.32□□□□□ -1.08
LINC00557-201ENST00000563184 SSTR4P31391 388 aa8.32□□□□□ -1.08
LINC00557-201ENST00000563184 GFRA1P56159 465 aa8.32□□□□□ -1.08
LINC00557-201ENST00000563184 TEKQ02763 1124 aa8.32□□□□□ -1.08
LINC00557-201ENST00000563184 TMEM67Q5HYA8 995 aa8.32□□□□□ -1.08
LINC00557-201ENST00000563184 ZNF574Q6ZN55 896 aaPredicted RBP8.32□□□□□ -1.08
LINC00557-201ENST00000563184 ZSWIM2Q8NEG5 633 aa8.32□□□□□ -1.08
LINC00557-201ENST00000563184 KISS1RQ969F8 398 aaPredicted RBP8.32□□□□□ -1.08
LINC00557-201ENST00000563184 IER2Q9BTL4 223 aa8.32□□□□□ -1.08
LINC00557-201ENST00000563184 CYP26B1Q9NR63 512 aa8.32□□□□□ -1.08
LINC00557-201ENST00000563184 ZNF281Q9Y2X9 895 aa8.32□□□□□ -1.08
LINC00557-201ENST00000563184 TMEM82A0PJX8 343 aa8.31□□□□□ -1.08
LINC00557-201ENST00000563184 PRODHO43272 600 aa8.31□□□□□ -1.08
LINC00557-201ENST00000563184 DLX3O60479 287 aa8.31□□□□□ -1.08
LINC00557-201ENST00000563184 SCG5P05408 212 aa8.31□□□□□ -1.08
LINC00557-201ENST00000563184 CD8BP10966 210 aa8.31□□□□□ -1.08
LINC00557-201ENST00000563184 PABPC1P11940 636 aaKnown RBP8.31□□□□□ -1.08
LINC00557-201ENST00000563184 L1CAMP32004 1257 aa8.31□□□□□ -1.08
LINC00557-201ENST00000563184 PCBP3P57721 371 aaKnown RBP8.31□□□□□ -1.08
LINC00557-201ENST00000563184 RNF111Q6ZNA4 994 aa8.31□□□□□ -1.08
LINC00557-201ENST00000563184 C1orf159Q96HA4 380 aa8.31□□□□□ -1.08
LINC00557-201ENST00000563184 SLC26A8Q96RN1 970 aa8.31□□□□□ -1.08
LINC00557-201ENST00000563184 HOXC12P31275 282 aa8.3□□□□□ -1.08
LINC00557-201ENST00000563184 EGR3Q06889 387 aa8.3□□□□□ -1.08
LINC00557-201ENST00000563184 SCRN1Q12765 414 aa8.3□□□□□ -1.08
LINC00557-201ENST00000563184 IKZF1Q13422 519 aa8.3□□□□□ -1.08
LINC00557-201ENST00000563184 ZC3H12BQ5HYM0 836 aaKnown RBP8.3□□□□□ -1.08
LINC00557-201ENST00000563184 NSMFQ6X4W1 530 aa8.3□□□□□ -1.08
LINC00557-201ENST00000563184 ZPBP2Q6X784 338 aa8.3□□□□□ -1.08
LINC00557-201ENST00000563184 FAM177A1Q8N128 213 aaPredicted RBP8.3□□□□□ -1.08
LINC00557-201ENST00000563184 STK11IPQ8N1F8 1099 aa8.3□□□□□ -1.08
LINC00557-201ENST00000563184 KREMEN2Q8NCW0 462 aa8.3□□□□□ -1.08
LINC00557-201ENST00000563184 COPS5Q92905 334 aa8.3□□□□□ -1.08
LINC00557-201ENST00000563184 CWC22Q9HCG8 908 aaKnown RBP8.3□□□□□ -1.08
LINC00557-201ENST00000563184 CCDC39Q9UFE4 941 aa8.3□□□□□ -1.08
LINC00557-201ENST00000563184 TRBV23-1A0A0A0MS06 115 aa8.29□□□□□ -1.08
LINC00557-201ENST00000563184 FKTNO75072 461 aa8.29□□□□□ -1.08
LINC00557-201ENST00000563184 SNRPB2P08579 225 aaKnown RBP8.29□□□□□ -1.08
LINC00557-201ENST00000563184 HSD3B2P26439 372 aa8.29□□□□□ -1.08
LINC00557-201ENST00000563184 PRSS53Q2L4Q9 553 aa8.29□□□□□ -1.08
LINC00557-201ENST00000563184 SLC35F1Q5T1Q4 408 aa8.29□□□□□ -1.08
LINC00557-201ENST00000563184 EGFLAMQ63HQ2 1017 aa8.29□□□□□ -1.08
LINC00557-201ENST00000563184 DENND5AQ6IQ26 1287 aa8.29□□□□□ -1.08
LINC00557-201ENST00000563184 HOMER1Q86YM7 354 aa8.29□□□□□ -1.08
LINC00557-201ENST00000563184 TMEM145Q8NBT3 493 aa8.29□□□□□ -1.08
LINC00557-201ENST00000563184 APPBP2Q92624 585 aa8.29□□□□□ -1.08
LINC00557-201ENST00000563184 DHRS4Q9BTZ2 278 aa8.29□□□□□ -1.08
LINC00557-201ENST00000563184 CARS2Q9HA77 564 aaKnown RBP8.29□□□□□ -1.08
LINC00557-201ENST00000563184 AP5S1Q9NUS5 200 aa8.29□□□□□ -1.08
LINC00557-201ENST00000563184 SLC5A6Q9Y289 635 aa8.29□□□□□ -1.08
LINC00557-201ENST00000563184 MRPS23Q9Y3D9 190 aaKnown RBP8.29□□□□□ -1.08
LINC00557-201ENST00000563184 BACE2Q9Y5Z0 518 aa8.29□□□□□ -1.08
LINC00557-201ENST00000563184 ADAMTS4O75173 837 aa8.28□□□□□ -1.08
LINC00557-201ENST00000563184 CDC45O75419 566 aa8.28□□□□□ -1.08
LINC00557-201ENST00000563184 GSTM1P09488 218 aa8.28□□□□□ -1.08
LINC00557-201ENST00000563184 NOP2P46087 812 aaKnown RBP8.28□□□□□ -1.08
LINC00557-201ENST00000563184 CEBPAP49715 358 aaPredicted RBP8.28□□□□□ -1.08
LINC00557-201ENST00000563184 MAP4K2Q12851 820 aa8.28□□□□□ -1.08
LINC00557-201ENST00000563184 TKFCQ3LXA3 575 aa8.28□□□□□ -1.08
LINC00557-201ENST00000563184 RCSD1Q6JBY9 416 aa8.28□□□□□ -1.08
LINC00557-201ENST00000563184 VSIG10LQ86VR7 867 aa8.28□□□□□ -1.08
LINC00557-201ENST00000563184 SCUBE1Q8IWY4 988 aa8.28□□□□□ -1.08
LINC00557-201ENST00000563184 NPLOC4Q8TAT6 608 aa8.28□□□□□ -1.08
LINC00557-201ENST00000563184 CCDC140Q96MF4 163 aa8.28□□□□□ -1.08
LINC00557-201ENST00000563184 CDC6Q99741 560 aa8.28□□□□□ -1.08
LINC00557-201ENST00000563184 C2orf71A6NGG8 1288 aa8.27□□□□□ -1.09
LINC00557-201ENST00000563184 ARNTLO00327 626 aa8.27□□□□□ -1.09
LINC00557-201ENST00000563184 PPP1R12AO14974 1030 aaPredicted RBP8.27□□□□□ -1.09
LINC00557-201ENST00000563184 FGF10O15520 208 aaPredicted RBP8.27□□□□□ -1.09
LINC00557-201ENST00000563184 THBDP07204 575 aa8.27□□□□□ -1.09
LINC00557-201ENST00000563184 ECI1P42126 302 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms