RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 ARL8AQ96BM9 186 aa15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 SPATS2LQ9NUQ6 558 aaKnown RBP15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 A0A1B0GTH6 734 aa15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 MFAP3LO75121 409 aa15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 GBP2P32456 591 aaPredicted RBP15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 IFT88Q13099 833 aa15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 SLC39A14Q15043 492 aa15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 SF3B3Q15393 1217 aaKnown RBP15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 BRAPQ7Z569 592 aa15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 FAM228AQ86W67 206 aa15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 RRP36Q96EU6 259 aaKnown RBP15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 ZSWIM5Q9P217 1185 aa15.67■□□□□ 0.1
GTF3C1-203ENST00000562609 PPP1R12BO60237 982 aaPredicted RBP15.66■□□□□ 0.1
GTF3C1-203ENST00000562609 SSR1P43307 286 aaKnown RBP15.66■□□□□ 0.1
GTF3C1-203ENST00000562609 PLCB4Q15147 1175 aa15.66■□□□□ 0.1
GTF3C1-203ENST00000562609 TLDC1Q6P9B6 456 aa15.66■□□□□ 0.1
GTF3C1-203ENST00000562609 NFXL1Q6ZNB6 911 aa15.66■□□□□ 0.1
GTF3C1-203ENST00000562609 ENOX1Q8TC92 643 aaKnown RBP15.66■□□□□ 0.1
GTF3C1-203ENST00000562609 TATDN2Q93075 761 aa15.66■□□□□ 0.1
GTF3C1-203ENST00000562609 CCDC114Q96M63 670 aa15.66■□□□□ 0.1
GTF3C1-203ENST00000562609 NLRP3Q96P20 1036 aa15.66■□□□□ 0.1
GTF3C1-203ENST00000562609 KIF9Q9HAQ2 790 aa15.66■□□□□ 0.1
GTF3C1-203ENST00000562609 BSDC1Q9NW68 430 aaPredicted RBP15.66■□□□□ 0.1
GTF3C1-203ENST00000562609 GUCA1BQ9UMX6 200 aa15.66■□□□□ 0.1
GTF3C1-203ENST00000562609 ANGEL1Q9UNK9 670 aaKnown RBP15.66■□□□□ 0.1
GTF3C1-203ENST00000562609 CNTNAP4Q9C0A0 1308 aa15.66■□□□□ 0.1
GTF3C1-203ENST00000562609 MINDY4BA8MYZ0 360 aa15.66■□□□□ 0.1
GTF3C1-203ENST00000562609 OPA1O60313 960 aa15.66■□□□□ 0.1
GTF3C1-203ENST00000562609 ADCY2Q08462 1091 aa15.66■□□□□ 0.1
GTF3C1-203ENST00000562609 CYB5D1Q6P9G0 228 aa15.66■□□□□ 0.1
GTF3C1-203ENST00000562609 CCDC82Q8N4S0 544 aa15.66■□□□□ 0.1
GTF3C1-203ENST00000562609 FAM84BQ96KN1 310 aaPredicted RBP15.66■□□□□ 0.1
GTF3C1-203ENST00000562609 FAM184BQ9ULE4 1060 aa15.66■□□□□ 0.1
GTF3C1-203ENST00000562609 ANKRD33BA6NCL7 494 aa15.65■□□□□ 0.1
GTF3C1-203ENST00000562609 A6NNZ2 444 aa15.65■□□□□ 0.1
GTF3C1-203ENST00000562609 ATRNO75882 1429 aa15.65■□□□□ 0.1
GTF3C1-203ENST00000562609 RPS8P62241 208 aaKnown RBP15.65■□□□□ 0.1
GTF3C1-203ENST00000562609 TUBB8Q3ZCM7 444 aa15.65■□□□□ 0.1
GTF3C1-203ENST00000562609 TTMPQ5BVD1 217 aa15.65■□□□□ 0.1
GTF3C1-203ENST00000562609 SH2D3CQ8N5H7 860 aa15.65■□□□□ 0.1
GTF3C1-203ENST00000562609 RREB1Q92766 1687 aa15.65■□□□□ 0.1
GTF3C1-203ENST00000562609 SH3GL3Q99963 347 aa15.65■□□□□ 0.1
GTF3C1-203ENST00000562609 SLF1Q9BQI6 1058 aa15.65■□□□□ 0.1
GTF3C1-203ENST00000562609 TRIM10Q9UDY6 481 aa15.65■□□□□ 0.1
GTF3C1-203ENST00000562609 MAN1B1Q9UKM7 699 aa15.65■□□□□ 0.1
GTF3C1-203ENST00000562609 CYP2D7A0A087X1C5 515 aa15.65■□□□□ 0.1
GTF3C1-203ENST00000562609 PEX19P40855 299 aa15.65■□□□□ 0.1
GTF3C1-203ENST00000562609 DYNLL1P63167 89 aaKnown RBP15.65■□□□□ 0.1
GTF3C1-203ENST00000562609 FAM196AQ6ZSG2 479 aa15.65■□□□□ 0.1
GTF3C1-203ENST00000562609 TXNRD3Q86VQ6 643 aa15.65■□□□□ 0.1
GTF3C1-203ENST00000562609 ZNF473Q8WTR7 871 aaKnown RBP15.65■□□□□ 0.1
GTF3C1-203ENST00000562609 CNKSR2Q8WXI2 1034 aa15.65■□□□□ 0.1
GTF3C1-203ENST00000562609 GJD4Q96KN9 370 aaPredicted RBP15.65■□□□□ 0.1
GTF3C1-203ENST00000562609 MED15Q96RN5 788 aa15.65■□□□□ 0.1
GTF3C1-203ENST00000562609 ETAA1Q9NY74 926 aa15.65■□□□□ 0.1
GTF3C1-203ENST00000562609 RTL9Q8NET4 1388 aa15.64■□□□□ 0.09
GTF3C1-203ENST00000562609 MPHOSPH10O00566 681 aaKnown RBP15.64■□□□□ 0.09
GTF3C1-203ENST00000562609 METAP2P50579 478 aaKnown RBP eCLIP15.64■□□□□ 0.09
GTF3C1-203ENST00000562609 FXR1P51114 621 aaKnown RBP eCLIP15.64■□□□□ 0.09
GTF3C1-203ENST00000562609 TMEM67Q5HYA8 995 aa15.64■□□□□ 0.09
GTF3C1-203ENST00000562609 KCTD16Q68DU8 428 aa15.64■□□□□ 0.09
GTF3C1-203ENST00000562609 CMTR1Q8N1G2 835 aaKnown RBP15.64■□□□□ 0.09
GTF3C1-203ENST00000562609 AENQ8WTP8 325 aaKnown RBP15.64■□□□□ 0.09
GTF3C1-203ENST00000562609 ATP6V0A4Q9HBG4 840 aa15.64■□□□□ 0.09
GTF3C1-203ENST00000562609 SAR1BQ9Y6B6 198 aa15.64■□□□□ 0.09
GTF3C1-203ENST00000562609 COL1A1P02452 1464 aaPredicted RBP15.64■□□□□ 0.09
GTF3C1-203ENST00000562609 BTAF1O14981 1849 aa15.64■□□□□ 0.09
GTF3C1-203ENST00000562609 SH2B2O14492 632 aaPredicted RBP15.64■□□□□ 0.09
GTF3C1-203ENST00000562609 ATP1A1P05023 1023 aaKnown RBP15.64■□□□□ 0.09
GTF3C1-203ENST00000562609 LSP1P33241 339 aa15.64■□□□□ 0.09
GTF3C1-203ENST00000562609 ERVK-24P63145 666 aa15.64■□□□□ 0.09
GTF3C1-203ENST00000562609 EVX2Q03828 476 aa15.64■□□□□ 0.09
GTF3C1-203ENST00000562609 SLC4A8Q2Y0W8 1093 aa15.64■□□□□ 0.09
GTF3C1-203ENST00000562609 CAVIN4Q5BKX8 364 aa15.64■□□□□ 0.09
GTF3C1-203ENST00000562609 RUFY1Q96T51 708 aa15.64■□□□□ 0.09
GTF3C1-203ENST00000562609 EPN3Q9H201 632 aa15.64■□□□□ 0.09
GTF3C1-203ENST00000562609 LRRC4BQ9NT99 713 aa15.64■□□□□ 0.09
GTF3C1-203ENST00000562609 TPX2Q9ULW0 747 aaKnown RBP15.64■□□□□ 0.09
GTF3C1-203ENST00000562609 IFIT3O14879 490 aaKnown RBP15.63■□□□□ 0.09
GTF3C1-203ENST00000562609 RFC4P35249 363 aa15.63■□□□□ 0.09
GTF3C1-203ENST00000562609 APOA5Q6Q788 366 aa15.63■□□□□ 0.09
GTF3C1-203ENST00000562609 TPTE2Q6XPS3 522 aa15.63■□□□□ 0.09
GTF3C1-203ENST00000562609 CNGA4Q8IV77 575 aa15.63■□□□□ 0.09
GTF3C1-203ENST00000562609 FUKQ8N0W3 1084 aa15.63■□□□□ 0.09
GTF3C1-203ENST00000562609 FBXL16Q8N461 479 aa15.63■□□□□ 0.09
GTF3C1-203ENST00000562609 CAGE1Q8TC20 777 aa15.63■□□□□ 0.09
GTF3C1-203ENST00000562609 IGDCC4Q8TDY8 1250 aa15.63■□□□□ 0.09
GTF3C1-203ENST00000562609 SPDL1Q96EA4 605 aa15.63■□□□□ 0.09
GTF3C1-203ENST00000562609 AFF2P51816 1311 aa15.63■□□□□ 0.09
GTF3C1-203ENST00000562609 HSPA1LP34931 641 aa15.63■□□□□ 0.09
GTF3C1-203ENST00000562609 GUCY1A3Q02108 690 aa15.63■□□□□ 0.09
GTF3C1-203ENST00000562609 MFSD6Q6ZSS7 791 aa15.63■□□□□ 0.09
GTF3C1-203ENST00000562609 TMTC1Q8IUR5 882 aa15.63■□□□□ 0.09
GTF3C1-203ENST00000562609 CCDC50Q8IVM0 306 aa15.63■□□□□ 0.09
GTF3C1-203ENST00000562609 ZNF384Q8TF68 577 aa15.63■□□□□ 0.09
GTF3C1-203ENST00000562609 PAGR1Q9BTK6 254 aa15.63■□□□□ 0.09
GTF3C1-203ENST00000562609 KCNH3Q9ULD8 1083 aa15.63■□□□□ 0.09
GTF3C1-203ENST00000562609 GOLGA6L7A0A1B0GV03 622 aa15.63■□□□□ 0.09
GTF3C1-203ENST00000562609 GYPCP04921 128 aa15.63■□□□□ 0.09
GTF3C1-203ENST00000562609 KIF23Q02241 960 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms