RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 PRPF38AQ8NAV1 312 aaKnown RBP26.05■■□□□ 1.76
SYNGR3-202ENST00000562045 SMARCC2Q8TAQ2 1214 aa26.05■■□□□ 1.76
SYNGR3-202ENST00000562045 PRDM10Q9NQV6 1147 aa26.05■■□□□ 1.76
SYNGR3-202ENST00000562045 RABGAP1Q9Y3P9 1069 aa26.05■■□□□ 1.76
SYNGR3-202ENST00000562045 CDKL5O76039 1030 aa26.04■■□□□ 1.76
SYNGR3-202ENST00000562045 CTDNEP1O95476 244 aa26.04■■□□□ 1.76
SYNGR3-202ENST00000562045 NUCB2P80303 420 aa26.04■■□□□ 1.76
SYNGR3-202ENST00000562045 IKQ13123 557 aaPredicted RBP26.04■■□□□ 1.76
SYNGR3-202ENST00000562045 RTN1Q16799 776 aa26.04■■□□□ 1.76
SYNGR3-202ENST00000562045 CCDC144CPQ8IYA2 1237 aa26.04■■□□□ 1.76
SYNGR3-202ENST00000562045 FANCBQ8NB91 859 aa26.04■■□□□ 1.76
SYNGR3-202ENST00000562045 GPRC5AQ8NFJ5 357 aa26.04■■□□□ 1.76
SYNGR3-202ENST00000562045 PORCNQ9H237 461 aa26.04■■□□□ 1.76
SYNGR3-202ENST00000562045 SMCHD1A6NHR9 2005 aa26.04■■□□□ 1.76
SYNGR3-202ENST00000562045 PTPDC1A2A3K4 754 aa26.03■■□□□ 1.76
SYNGR3-202ENST00000562045 TRIM47Q96LD4 638 aa26.03■■□□□ 1.76
SYNGR3-202ENST00000562045 UBA5Q9GZZ9 404 aa26.03■■□□□ 1.76
SYNGR3-202ENST00000562045 PRR12Q9ULL5 1215 aa26.03■■□□□ 1.76
SYNGR3-202ENST00000562045 JAK2O60674 1132 aa26.02■■□□□ 1.76
SYNGR3-202ENST00000562045 CDC27P30260 824 aa26.02■■□□□ 1.76
SYNGR3-202ENST00000562045 GTF3C2Q8WUA4 911 aaPredicted RBP26.02■■□□□ 1.76
SYNGR3-202ENST00000562045 MAD2L2Q9UI95 211 aa26.02■■□□□ 1.76
SYNGR3-202ENST00000562045 KIF3AQ9Y496 699 aa26.02■■□□□ 1.76
SYNGR3-202ENST00000562045 PLA2G6O60733 806 aa26.02■■□□□ 1.76
SYNGR3-202ENST00000562045 ADD1P35611 737 aaKnown RBP26.02■■□□□ 1.76
SYNGR3-202ENST00000562045 BTNL9Q6UXG8 535 aa26.02■■□□□ 1.76
SYNGR3-202ENST00000562045 EFCC1Q9HA90 598 aa26.02■■□□□ 1.76
SYNGR3-202ENST00000562045 FAM217BQ9NTX9 383 aaPredicted RBP26.02■■□□□ 1.76
SYNGR3-202ENST00000562045 RBM28Q9NW13 759 aaKnown RBP26.02■■□□□ 1.76
SYNGR3-202ENST00000562045 ZNF214Q9UL59 606 aaPredicted RBP26.02■■□□□ 1.76
SYNGR3-202ENST00000562045 PLXNB2O15031 1838 aa26.02■■□□□ 1.76
SYNGR3-202ENST00000562045 PDIA4P13667 645 aaKnown RBP26.01■■□□□ 1.75
SYNGR3-202ENST00000562045 PDCP20941 246 aa26.01■■□□□ 1.75
SYNGR3-202ENST00000562045 PSMC4P43686 418 aa26.01■■□□□ 1.75
SYNGR3-202ENST00000562045 SLC35G1Q2M3R5 365 aa26.01■■□□□ 1.75
SYNGR3-202ENST00000562045 FAM160B2Q86V87 743 aa26.01■■□□□ 1.75
SYNGR3-202ENST00000562045 CTCFLQ8NI51 663 aaPredicted RBP26.01■■□□□ 1.75
SYNGR3-202ENST00000562045 CHURC1Q8WUH1 139 aa26.01■■□□□ 1.75
SYNGR3-202ENST00000562045 ERO1AQ96HE7 468 aa26.01■■□□□ 1.75
SYNGR3-202ENST00000562045 MAP3K14Q99558 947 aa26.01■■□□□ 1.75
SYNGR3-202ENST00000562045 SLC38A10Q9HBR0 1119 aa26.01■■□□□ 1.75
SYNGR3-202ENST00000562045 PARP1P09874 1014 aaKnown RBP26■■□□□ 1.75
SYNGR3-202ENST00000562045 TAL1P17542 331 aaPredicted RBP26■■□□□ 1.75
SYNGR3-202ENST00000562045 PLS1Q14651 629 aa26■■□□□ 1.75
SYNGR3-202ENST00000562045 GRM4Q14833 912 aa26■■□□□ 1.75
SYNGR3-202ENST00000562045 COL13A1Q5TAT6 717 aaPredicted RBP26■■□□□ 1.75
SYNGR3-202ENST00000562045 FAM184AQ8NB25 1140 aa26■■□□□ 1.75
SYNGR3-202ENST00000562045 MOV10L1Q9BXT6 1211 aaKnown RBP26■■□□□ 1.75
SYNGR3-202ENST00000562045 SPATC1LQ9H0A9 340 aa26■■□□□ 1.75
SYNGR3-202ENST00000562045 PALM3A6NDB9 673 aaPredicted RBP26■■□□□ 1.75
SYNGR3-202ENST00000562045 GPATCH4Q5T3I0 446 aaKnown RBP26■■□□□ 1.75
SYNGR3-202ENST00000562045 SYDE2Q5VT97 1194 aa26■■□□□ 1.75
SYNGR3-202ENST00000562045 NBPF11Q86T75 865 aa26■■□□□ 1.75
SYNGR3-202ENST00000562045 MB21D1Q8N884 522 aa26■■□□□ 1.75
SYNGR3-202ENST00000562045 RAVER2Q9HCJ3 691 aaKnown RBP26■■□□□ 1.75
SYNGR3-202ENST00000562045 BAZ2BQ9UIF8 2168 aaKnown RBP25.99■■□□□ 1.75
SYNGR3-202ENST00000562045 ZNF536O15090 1300 aa25.99■■□□□ 1.75
SYNGR3-202ENST00000562045 KIF5BP33176 963 aa25.99■■□□□ 1.75
SYNGR3-202ENST00000562045 NTRK3Q16288 839 aa25.99■■□□□ 1.75
SYNGR3-202ENST00000562045 ASPRV1Q53RT3 343 aa25.99■■□□□ 1.75
SYNGR3-202ENST00000562045 OTOP1Q7RTM1 612 aa25.99■■□□□ 1.75
SYNGR3-202ENST00000562045 CPXCR1Q8N123 301 aa25.99■■□□□ 1.75
SYNGR3-202ENST00000562045 DDX11Q96FC9 970 aa25.99■■□□□ 1.75
SYNGR3-202ENST00000562045 DTNBO60941 627 aa25.98■■□□□ 1.75
SYNGR3-202ENST00000562045 IFNAR1P17181 557 aa25.98■■□□□ 1.75
SYNGR3-202ENST00000562045 RIPK3Q9Y572 518 aa25.98■■□□□ 1.75
SYNGR3-202ENST00000562045 TRIM17Q9Y577 477 aa25.98■■□□□ 1.75
SYNGR3-202ENST00000562045 FMNL1O95466 1100 aaPredicted RBP25.97■■□□□ 1.75
SYNGR3-202ENST00000562045 LARP1BQ659C4 914 aaKnown RBP25.97■■□□□ 1.75
SYNGR3-202ENST00000562045 CCDC174Q6PII3 467 aa25.97■■□□□ 1.75
SYNGR3-202ENST00000562045 KLRF2D3W0D1 207 aa25.97■■□□□ 1.75
SYNGR3-202ENST00000562045 SYT1P21579 422 aa25.97■■□□□ 1.75
SYNGR3-202ENST00000562045 AGBL1Q96MI9 1066 aa25.97■■□□□ 1.75
SYNGR3-202ENST00000562045 GABRQQ9UN88 632 aa25.97■■□□□ 1.75
SYNGR3-202ENST00000562045 MYH6P13533 1939 aa25.96■■□□□ 1.75
SYNGR3-202ENST00000562045 STX6O43752 255 aa25.96■■□□□ 1.75
SYNGR3-202ENST00000562045 ZBED4O75132 1171 aa25.96■■□□□ 1.75
SYNGR3-202ENST00000562045 ERCC3P19447 782 aa25.96■■□□□ 1.75
SYNGR3-202ENST00000562045 STAT3P40763 770 aa25.96■■□□□ 1.75
SYNGR3-202ENST00000562045 PKP1Q13835 747 aa25.96■■□□□ 1.75
SYNGR3-202ENST00000562045 KIF22Q14807 665 aa25.96■■□□□ 1.75
SYNGR3-202ENST00000562045 ADGRF4Q8IZF3 695 aa25.96■■□□□ 1.75
SYNGR3-202ENST00000562045 RANBP17Q9H2T7 1088 aaKnown RBP25.96■■□□□ 1.75
SYNGR3-202ENST00000562045 TNPO2O14787 897 aaKnown RBP25.95■■□□□ 1.74
SYNGR3-202ENST00000562045 FCGRTP55899 365 aa25.95■■□□□ 1.74
SYNGR3-202ENST00000562045 SNRNP48Q6IEG0 339 aaKnown RBP25.95■■□□□ 1.74
SYNGR3-202ENST00000562045 CTU1Q7Z7A3 348 aaKnown RBP25.95■■□□□ 1.74
SYNGR3-202ENST00000562045 CMTR1Q8N1G2 835 aaKnown RBP25.95■■□□□ 1.74
SYNGR3-202ENST00000562045 VAT1LQ9HCJ6 419 aa25.95■■□□□ 1.74
SYNGR3-202ENST00000562045 ORC3Q9UBD5 711 aaPredicted RBP25.95■■□□□ 1.74
SYNGR3-202ENST00000562045 STK36Q9NRP7 1315 aa25.95■■□□□ 1.74
SYNGR3-202ENST00000562045 CYTH3O43739 400 aa25.94■■□□□ 1.74
SYNGR3-202ENST00000562045 PLEKHA8P1O95397 391 aa25.94■■□□□ 1.74
SYNGR3-202ENST00000562045 BRD1O95696 1058 aa25.94■■□□□ 1.74
SYNGR3-202ENST00000562045 GNAQP50148 359 aa25.94■■□□□ 1.74
SYNGR3-202ENST00000562045 TMTC3Q6ZXV5 915 aa25.94■■□□□ 1.74
SYNGR3-202ENST00000562045 GPR142Q7Z601 462 aa25.94■■□□□ 1.74
SYNGR3-202ENST00000562045 TRIM22Q8IYM9 498 aa25.94■■□□□ 1.74
SYNGR3-202ENST00000562045 JMJD4Q9H9V9 463 aa25.94■■□□□ 1.74
SYNGR3-202ENST00000562045 ATP2A1O14983 1001 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms