RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 ZNF792Q3KQV3 632 aa21.9■■□□□ 1.1
PKD1-223ENST00000561668 CCDC174Q6PII3 467 aa21.9■■□□□ 1.1
PKD1-223ENST00000561668 STOX1Q6ZVD7 989 aa21.9■■□□□ 1.1
PKD1-223ENST00000561668 RALYLQ86SE5 291 aaKnown RBP21.9■■□□□ 1.1
PKD1-223ENST00000561668 KCNB2Q92953 911 aa21.9■■□□□ 1.1
PKD1-223ENST00000561668 PAWRQ96IZ0 340 aaKnown RBP21.9■■□□□ 1.1
PKD1-223ENST00000561668 AGBL1Q96MI9 1066 aa21.9■■□□□ 1.1
PKD1-223ENST00000561668 ACAD9Q9H845 621 aa21.9■■□□□ 1.1
PKD1-223ENST00000561668 ZNFX1Q9P2E3 1918 aaKnown RBP21.9■■□□□ 1.1
PKD1-223ENST00000561668 ZNF236Q9UL36 1845 aa21.9■■□□□ 1.1
PKD1-223ENST00000561668 ALAS1P13196 640 aa21.89■■□□□ 1.09
PKD1-223ENST00000561668 GPATCH4Q5T3I0 446 aaKnown RBP21.89■■□□□ 1.09
PKD1-223ENST00000561668 SYDE2Q5VT97 1194 aa21.89■■□□□ 1.09
PKD1-223ENST00000561668 CREB3L3Q68CJ9 461 aa21.89■■□□□ 1.09
PKD1-223ENST00000561668 TTBK2Q6IQ55 1244 aa21.89■■□□□ 1.09
PKD1-223ENST00000561668 BTNL9Q6UXG8 535 aa21.89■■□□□ 1.09
PKD1-223ENST00000561668 UBE2Q1Q7Z7E8 422 aa21.89■■□□□ 1.09
PKD1-223ENST00000561668 PNMA1Q8ND90 353 aa21.89■■□□□ 1.09
PKD1-223ENST00000561668 TRERF1Q96PN7 1200 aa21.89■■□□□ 1.09
PKD1-223ENST00000561668 TINF2Q9BSI4 451 aa21.89■■□□□ 1.09
PKD1-223ENST00000561668 DDX20Q9UHI6 824 aaKnown RBP21.89■■□□□ 1.09
PKD1-223ENST00000561668 PNMA2Q9UL42 364 aa21.89■■□□□ 1.09
PKD1-223ENST00000561668 TNKSO95271 1327 aa21.88■■□□□ 1.09
PKD1-223ENST00000561668 ERICH2A1L162 156 aa21.88■■□□□ 1.09
PKD1-223ENST00000561668 SNAP25P60880 206 aa21.88■■□□□ 1.09
PKD1-223ENST00000561668 ZNF543Q08ER8 600 aa21.88■■□□□ 1.09
PKD1-223ENST00000561668 IFIT1BQ5T764 474 aaKnown RBP21.88■■□□□ 1.09
PKD1-223ENST00000561668 LHX8Q68G74 356 aa21.88■■□□□ 1.09
PKD1-223ENST00000561668 NCOA7Q8NI08 942 aa21.88■■□□□ 1.09
PKD1-223ENST00000561668 MTA3Q9BTC8 594 aa21.88■■□□□ 1.09
PKD1-223ENST00000561668 NRBP1Q9UHY1 535 aa21.88■■□□□ 1.09
PKD1-223ENST00000561668 CCPG1Q9ULG6 757 aa21.88■■□□□ 1.09
PKD1-223ENST00000561668 CNPY2Q9Y2B0 182 aa21.88■■□□□ 1.09
PKD1-223ENST00000561668 SNHG28P0DPA3 235 aa21.87■■□□□ 1.09
PKD1-223ENST00000561668 CYBAP13498 195 aa21.87■■□□□ 1.09
PKD1-223ENST00000561668 SART3Q15020 963 aaKnown RBP21.87■■□□□ 1.09
PKD1-223ENST00000561668 SEC23AQ15436 765 aa21.87■■□□□ 1.09
PKD1-223ENST00000561668 PRAMEF19Q5SWL8 479 aa21.87■■□□□ 1.09
PKD1-223ENST00000561668 CYB5R4Q7L1T6 521 aa21.87■■□□□ 1.09
PKD1-223ENST00000561668 RASGRP2Q7LDG7 609 aa21.87■■□□□ 1.09
PKD1-223ENST00000561668 MB21D2Q8IYB1 491 aaPredicted RBP21.87■■□□□ 1.09
PKD1-223ENST00000561668 MSL3Q8N5Y2 521 aaKnown RBP21.87■■□□□ 1.09
PKD1-223ENST00000561668 ENAHQ8N8S7 591 aaPredicted RBP21.87■■□□□ 1.09
PKD1-223ENST00000561668 RNF146Q9NTX7 359 aa21.87■■□□□ 1.09
PKD1-223ENST00000561668 NR2E3Q9Y5X4 410 aa21.87■■□□□ 1.09
PKD1-223ENST00000561668 BRCA2P51587 3418 aa21.86■■□□□ 1.09
PKD1-223ENST00000561668 ZNF536O15090 1300 aa21.86■■□□□ 1.09
PKD1-223ENST00000561668 IGHA2P01877 340 aa21.86■■□□□ 1.09
PKD1-223ENST00000561668 ICAM1P05362 532 aa21.86■■□□□ 1.09
PKD1-223ENST00000561668 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.86■■□□□ 1.09
PKD1-223ENST00000561668 RANBP17Q9H2T7 1088 aaKnown RBP21.86■■□□□ 1.09
PKD1-223ENST00000561668 C11orf49Q9H6J7 331 aa21.86■■□□□ 1.09
PKD1-223ENST00000561668 DNAJC25-GNG10A0A024R161 153 aa21.85■■□□□ 1.09
PKD1-223ENST00000561668 POTEB2H3BUK9 544 aa21.85■■□□□ 1.09
PKD1-223ENST00000561668 SEPT4O43236 478 aa21.85■■□□□ 1.09
PKD1-223ENST00000561668 REC8O95072 547 aa21.85■■□□□ 1.09
PKD1-223ENST00000561668 RNF20Q5VTR2 975 aa21.85■■□□□ 1.09
PKD1-223ENST00000561668 ARRDC4Q8NCT1 418 aa21.85■■□□□ 1.09
PKD1-223ENST00000561668 TRPV1Q8NER1 839 aa21.85■■□□□ 1.09
PKD1-223ENST00000561668 PDE4DIPQ5VU43 2346 aa21.85■■□□□ 1.09
PKD1-223ENST00000561668 PFASO15067 1338 aa21.84■■□□□ 1.09
PKD1-223ENST00000561668 IFIT3O14879 490 aaKnown RBP21.84■■□□□ 1.09
PKD1-223ENST00000561668 EVI5O60447 810 aa21.84■■□□□ 1.09
PKD1-223ENST00000561668 PARP1P09874 1014 aaKnown RBP21.84■■□□□ 1.09
PKD1-223ENST00000561668 GOLGA8HP0CJ92 632 aa21.84■■□□□ 1.09
PKD1-223ENST00000561668 ASPRV1Q53RT3 343 aa21.84■■□□□ 1.09
PKD1-223ENST00000561668 ZNF467Q7Z7K2 595 aaPredicted RBP21.84■■□□□ 1.09
PKD1-223ENST00000561668 DIS3LQ8TF46 1054 aaKnown RBP21.84■■□□□ 1.09
PKD1-223ENST00000561668 HSPA4P34932 840 aa21.83■■□□□ 1.09
PKD1-223ENST00000561668 ANTXR2P58335 489 aa21.83■■□□□ 1.09
PKD1-223ENST00000561668 MAMDC4Q6UXC1 1216 aa21.83■■□□□ 1.09
PKD1-223ENST00000561668 RASEFQ8IZ41 740 aa21.83■■□□□ 1.09
PKD1-223ENST00000561668 IGDCC4Q8TDY8 1250 aa21.83■■□□□ 1.09
PKD1-223ENST00000561668 UBA5Q9GZZ9 404 aa21.83■■□□□ 1.09
PKD1-223ENST00000561668 SYNGAP1Q96PV0 1343 aa21.82■■□□□ 1.08
PKD1-223ENST00000561668 DHX16O60231 1041 aaKnown RBP21.82■■□□□ 1.08
PKD1-223ENST00000561668 MYCNP04198 464 aaPredicted RBP21.82■■□□□ 1.08
PKD1-223ENST00000561668 NSMFQ6X4W1 530 aa21.82■■□□□ 1.08
PKD1-223ENST00000561668 USP26Q9BXU7 913 aa21.82■■□□□ 1.08
PKD1-223ENST00000561668 PLXNA1Q9UIW2 1896 aa21.81■■□□□ 1.08
PKD1-223ENST00000561668 RARBP10826 455 aa21.81■■□□□ 1.08
PKD1-223ENST00000561668 WTAPQ15007 396 aa21.81■■□□□ 1.08
PKD1-223ENST00000561668 ANO1Q5XXA6 986 aa21.81■■□□□ 1.08
PKD1-223ENST00000561668 A1CFQ9NQ94 594 aaKnown RBP21.81■■□□□ 1.08
PKD1-223ENST00000561668 ASB14A6NK59 587 aa21.8■■□□□ 1.08
PKD1-223ENST00000561668 AKR1A1P14550 325 aa21.8■■□□□ 1.08
PKD1-223ENST00000561668 CNTN2Q02246 1040 aa21.8■■□□□ 1.08
PKD1-223ENST00000561668 COL9A3Q14050 684 aaPredicted RBP21.8■■□□□ 1.08
PKD1-223ENST00000561668 MUM1L1Q5H9M0 696 aa21.8■■□□□ 1.08
PKD1-223ENST00000561668 ABHD16BQ9H3Z7 469 aa21.8■■□□□ 1.08
PKD1-223ENST00000561668 VAT1LQ9HCJ6 419 aa21.8■■□□□ 1.08
PKD1-223ENST00000561668 FAM184BQ9ULE4 1060 aa21.8■■□□□ 1.08
PKD1-223ENST00000561668 WDR19Q8NEZ3 1342 aa21.8■■□□□ 1.08
PKD1-223ENST00000561668 KBTBD13C9JR72 458 aa21.79■■□□□ 1.08
PKD1-223ENST00000561668 H0YGN5 161 aa21.79■■□□□ 1.08
PKD1-223ENST00000561668 DNM1LO00429 736 aa21.79■■□□□ 1.08
PKD1-223ENST00000561668 MCM5P33992 734 aa21.79■■□□□ 1.08
PKD1-223ENST00000561668 MNX1P50219 401 aaPredicted RBP21.79■■□□□ 1.08
PKD1-223ENST00000561668 KRT32Q14532 448 aa21.79■■□□□ 1.08
PKD1-223ENST00000561668 TMEM67Q5HYA8 995 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms