RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 STRNO43815 780 aa13.92□□□□□ -0.18
RABGGTA-218ENST00000560777 ICAM1P05362 532 aa13.92□□□□□ -0.18
RABGGTA-218ENST00000560777 CALM1P0DP23 149 aa13.92□□□□□ -0.18
RABGGTA-218ENST00000560777 CALM2P0DP24 149 aa13.92□□□□□ -0.18
RABGGTA-218ENST00000560777 CALM3P0DP25 149 aa13.92□□□□□ -0.18
RABGGTA-218ENST00000560777 RXRAP19793 462 aa13.92□□□□□ -0.18
RABGGTA-218ENST00000560777 FGD1P98174 961 aa13.92□□□□□ -0.18
RABGGTA-218ENST00000560777 APOA5Q6Q788 366 aa13.92□□□□□ -0.18
RABGGTA-218ENST00000560777 RAB11FIP4Q86YS3 637 aa13.92□□□□□ -0.18
RABGGTA-218ENST00000560777 FANCBQ8NB91 859 aa13.92□□□□□ -0.18
RABGGTA-218ENST00000560777 BRF1Q92994 677 aa13.92□□□□□ -0.18
RABGGTA-218ENST00000560777 NUDT12Q9BQG2 462 aa13.92□□□□□ -0.18
RABGGTA-218ENST00000560777 JMJD4Q9H9V9 463 aa13.92□□□□□ -0.18
RABGGTA-218ENST00000560777 KLF18A0A0U1RQI7 1052 aa13.91□□□□□ -0.18
RABGGTA-218ENST00000560777 CYTH3O43739 400 aa13.91□□□□□ -0.18
RABGGTA-218ENST00000560777 KIF5BP33176 963 aa13.91□□□□□ -0.18
RABGGTA-218ENST00000560777 COPB2P35606 906 aa13.91□□□□□ -0.18
RABGGTA-218ENST00000560777 APOBRQ0VD83 1088 aa13.91□□□□□ -0.18
RABGGTA-218ENST00000560777 IRF5Q13568 498 aa13.91□□□□□ -0.18
RABGGTA-218ENST00000560777 TOB2Q14106 344 aaPredicted RBP13.91□□□□□ -0.18
RABGGTA-218ENST00000560777 GRB14Q14449 540 aa13.91□□□□□ -0.18
RABGGTA-218ENST00000560777 SYNE3Q6ZMZ3 975 aa13.91□□□□□ -0.18
RABGGTA-218ENST00000560777 CCDC144CPQ8IYA2 1237 aa13.91□□□□□ -0.18
RABGGTA-218ENST00000560777 TNS4Q8IZW8 715 aa13.91□□□□□ -0.18
RABGGTA-218ENST00000560777 ABRAQ8N0Z2 381 aa13.91□□□□□ -0.18
RABGGTA-218ENST00000560777 CTCFLQ8NI51 663 aaPredicted RBP13.91□□□□□ -0.18
RABGGTA-218ENST00000560777 RAET1EQ8TD07 263 aa13.91□□□□□ -0.18
RABGGTA-218ENST00000560777 MTMR8Q96EF0 704 aa13.91□□□□□ -0.18
RABGGTA-218ENST00000560777 RIOX1Q9H6W3 641 aa13.91□□□□□ -0.18
RABGGTA-218ENST00000560777 CWC22Q9HCG8 908 aaKnown RBP13.91□□□□□ -0.18
RABGGTA-218ENST00000560777 HPS5Q9UPZ3 1129 aa13.91□□□□□ -0.18
RABGGTA-218ENST00000560777 IVNS1ABPQ9Y6Y0 642 aa13.91□□□□□ -0.18
RABGGTA-218ENST00000560777 ZBTB43O43298 467 aa13.9□□□□□ -0.18
RABGGTA-218ENST00000560777 FCER1AP12319 257 aa13.9□□□□□ -0.18
RABGGTA-218ENST00000560777 ALAS1P13196 640 aa13.9□□□□□ -0.18
RABGGTA-218ENST00000560777 TAL1P17542 331 aaPredicted RBP13.9□□□□□ -0.18
RABGGTA-218ENST00000560777 CYP2B6P20813 491 aa13.9□□□□□ -0.18
RABGGTA-218ENST00000560777 SMARCA1P28370 1054 aa13.9□□□□□ -0.18
RABGGTA-218ENST00000560777 EVCP57679 992 aa13.9□□□□□ -0.18
RABGGTA-218ENST00000560777 MAP2K5Q13163 448 aa13.9□□□□□ -0.18
RABGGTA-218ENST00000560777 MICU3Q86XE3 530 aa13.9□□□□□ -0.18
RABGGTA-218ENST00000560777 SRBD1Q8N5C6 995 aaKnown RBP13.9□□□□□ -0.18
RABGGTA-218ENST00000560777 CHST13Q8NET6 341 aa13.9□□□□□ -0.18
RABGGTA-218ENST00000560777 SOCS4Q8WXH5 440 aa13.9□□□□□ -0.18
RABGGTA-218ENST00000560777 TRERF1Q96PN7 1200 aa13.9□□□□□ -0.18
RABGGTA-218ENST00000560777 C22orf23Q9BZE7 217 aa13.9□□□□□ -0.18
RABGGTA-218ENST00000560777 PDRG1Q9NUG6 133 aa13.9□□□□□ -0.18
RABGGTA-218ENST00000560777 CCPG1Q9ULG6 757 aa13.9□□□□□ -0.18
RABGGTA-218ENST00000560777 HTTP42858 3142 aa13.9□□□□□ -0.18
RABGGTA-218ENST00000560777 SMCHD1A6NHR9 2005 aa13.9□□□□□ -0.18
RABGGTA-218ENST00000560777 PLXNB2O15031 1838 aa13.9□□□□□ -0.18
RABGGTA-218ENST00000560777 DHX16O60231 1041 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-218ENST00000560777 ADCY3O60266 1144 aa13.89□□□□□ -0.19
RABGGTA-218ENST00000560777 COBLO75128 1261 aa13.89□□□□□ -0.19
RABGGTA-218ENST00000560777 PLEKHA8P1O95397 391 aa13.89□□□□□ -0.19
RABGGTA-218ENST00000560777 XRCC5P13010 732 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-218ENST00000560777 ADORA2AP29274 412 aa13.89□□□□□ -0.19
RABGGTA-218ENST00000560777 RGS2P41220 211 aa13.89□□□□□ -0.19
RABGGTA-218ENST00000560777 RBM25P49756 843 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-218ENST00000560777 GNAQP50148 359 aa13.89□□□□□ -0.19
RABGGTA-218ENST00000560777 CDC37Q16543 378 aaPredicted RBP13.89□□□□□ -0.19
RABGGTA-218ENST00000560777 QRICH1Q2TAL8 776 aa13.89□□□□□ -0.19
RABGGTA-218ENST00000560777 TKFCQ3LXA3 575 aa13.89□□□□□ -0.19
RABGGTA-218ENST00000560777 MUM1L1Q5H9M0 696 aa13.89□□□□□ -0.19
RABGGTA-218ENST00000560777 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.89□□□□□ -0.19
RABGGTA-218ENST00000560777 CMTR1Q8N1G2 835 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-218ENST00000560777 PXYLP1Q8TE99 480 aa13.89□□□□□ -0.19
RABGGTA-218ENST00000560777 MMP19Q99542 508 aa13.89□□□□□ -0.19
RABGGTA-218ENST00000560777 KIF2CQ99661 725 aa13.89□□□□□ -0.19
RABGGTA-218ENST00000560777 LZTS2Q9BRK4 669 aa13.89□□□□□ -0.19
RABGGTA-218ENST00000560777 LARP6Q9BRS8 491 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-218ENST00000560777 BACH2Q9BYV9 841 aa13.89□□□□□ -0.19
RABGGTA-218ENST00000560777 ALDH8A1Q9H2A2 487 aaPredicted RBP13.89□□□□□ -0.19
RABGGTA-218ENST00000560777 HOMER2Q9NSB8 354 aa13.89□□□□□ -0.19
RABGGTA-218ENST00000560777 RNF146Q9NTX7 359 aa13.89□□□□□ -0.19
RABGGTA-218ENST00000560777 FAM217BQ9NTX9 383 aaPredicted RBP13.89□□□□□ -0.19
RABGGTA-218ENST00000560777 FBXO40Q9UH90 709 aa13.89□□□□□ -0.19
RABGGTA-218ENST00000560777 BAZ2BQ9UIF8 2168 aaKnown RBP13.88□□□□□ -0.19
RABGGTA-218ENST00000560777 ZBTB5O15062 677 aa13.88□□□□□ -0.19
RABGGTA-218ENST00000560777 PPP1R11O60927 126 aaPredicted RBP13.88□□□□□ -0.19
RABGGTA-218ENST00000560777 HOXC6P09630 235 aa13.88□□□□□ -0.19
RABGGTA-218ENST00000560777 ELNP15502 786 aa13.88□□□□□ -0.19
RABGGTA-218ENST00000560777 PDIA3P30101 505 aaKnown RBP13.88□□□□□ -0.19
RABGGTA-218ENST00000560777 CDC27P30260 824 aa13.88□□□□□ -0.19
RABGGTA-218ENST00000560777 GRK4P32298 578 aa13.88□□□□□ -0.19
RABGGTA-218ENST00000560777 RCAN1P53805 252 aa13.88□□□□□ -0.19
RABGGTA-218ENST00000560777 KCTD2Q14681 263 aa13.88□□□□□ -0.19
RABGGTA-218ENST00000560777 TMTC3Q6ZXV5 915 aa13.88□□□□□ -0.19
RABGGTA-218ENST00000560777 DPP9Q86TI2 863 aa13.88□□□□□ -0.19
RABGGTA-218ENST00000560777 NPLOC4Q8TAT6 608 aa13.88□□□□□ -0.19
RABGGTA-218ENST00000560777 SH3TC2Q8TF17 1288 aa13.88□□□□□ -0.19
RABGGTA-218ENST00000560777 ABHD8Q96I13 439 aa13.88□□□□□ -0.19
RABGGTA-218ENST00000560777 PIGSQ96S52 555 aa13.88□□□□□ -0.19
RABGGTA-218ENST00000560777 SPZ1Q9BXG8 430 aa13.88□□□□□ -0.19
RABGGTA-218ENST00000560777 ACAD9Q9H845 621 aa13.88□□□□□ -0.19
RABGGTA-218ENST00000560777 PNMA2Q9UL42 364 aa13.88□□□□□ -0.19
RABGGTA-218ENST00000560777 NAP1L2Q9ULW6 460 aaPredicted RBP13.88□□□□□ -0.19
RABGGTA-218ENST00000560777 DNAJC25-GNG10A0A024R161 153 aa13.87□□□□□ -0.19
RABGGTA-218ENST00000560777 PNMA6FA0A0J9YX94 578 aa13.87□□□□□ -0.19
RABGGTA-218ENST00000560777 PGK2P07205 417 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms