RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 NUP43Q8NFH3 380 aa6.12□□□□□ -1.43
LRRC28-218ENST00000560236 SLC6A18Q96N87 628 aa6.12□□□□□ -1.43
LRRC28-218ENST00000560236 ANTXR1Q9H6X2 564 aa6.12□□□□□ -1.43
LRRC28-218ENST00000560236 OTOL1A6NHN0 477 aaPredicted RBP6.11□□□□□ -1.43
LRRC28-218ENST00000560236 VAV1P15498 845 aa6.11□□□□□ -1.43
LRRC28-218ENST00000560236 CTSKP43235 329 aa6.11□□□□□ -1.43
LRRC28-218ENST00000560236 AUHQ13825 339 aaKnown RBP6.11□□□□□ -1.43
LRRC28-218ENST00000560236 FAM129CQ86XR2 697 aa6.11□□□□□ -1.43
LRRC28-218ENST00000560236 IGDCC3Q8IVU1 814 aa6.11□□□□□ -1.43
LRRC28-218ENST00000560236 TMEFF1Q8IYR6 380 aa6.11□□□□□ -1.43
LRRC28-218ENST00000560236 AP5S1Q9NUS5 200 aa6.11□□□□□ -1.43
LRRC28-218ENST00000560236 MEIS3P2A8K0S8 358 aa6.1□□□□□ -1.43
LRRC28-218ENST00000560236 TNFRSF10CO14798 259 aa6.1□□□□□ -1.43
LRRC28-218ENST00000560236 CCDC27Q2M243 656 aa6.1□□□□□ -1.43
LRRC28-218ENST00000560236 CRTC3Q6UUV7 619 aa6.1□□□□□ -1.43
LRRC28-218ENST00000560236 SP8Q8IXZ3 490 aa6.1□□□□□ -1.43
LRRC28-218ENST00000560236 CXorf38Q8TB03 319 aa6.1□□□□□ -1.43
LRRC28-218ENST00000560236 FEZF2Q8TBJ5 459 aa6.1□□□□□ -1.43
LRRC28-218ENST00000560236 PWWP2AQ96N64 755 aa6.1□□□□□ -1.43
LRRC28-218ENST00000560236 TNFRSF12AQ9NP84 129 aa6.1□□□□□ -1.43
LRRC28-218ENST00000560236 IMPACTQ9P2X3 320 aa6.1□□□□□ -1.43
LRRC28-218ENST00000560236 ACSL6Q9UKU0 697 aa6.1□□□□□ -1.43
LRRC28-218ENST00000560236 CBX2Q14781 532 aaPredicted RBP6.09□□□□□ -1.43
LRRC28-218ENST00000560236 ERICH6BQ5W0A0 696 aa6.09□□□□□ -1.43
LRRC28-218ENST00000560236 RPTNQ6XPR3 784 aa6.09□□□□□ -1.43
LRRC28-218ENST00000560236 ZDHHC14Q8IZN3 488 aa6.09□□□□□ -1.43
LRRC28-218ENST00000560236 NAT16Q8N8M0 369 aa6.09□□□□□ -1.43
LRRC28-218ENST00000560236 NKD1Q969G9 470 aa6.09□□□□□ -1.43
LRRC28-218ENST00000560236 DHRS1Q96LJ7 313 aa6.09□□□□□ -1.43
LRRC28-218ENST00000560236 SLC9A7Q96T83 725 aa6.09□□□□□ -1.43
LRRC28-218ENST00000560236 DSCC1Q9BVC3 393 aa6.09□□□□□ -1.43
LRRC28-218ENST00000560236 PRR13Q9NZ81 148 aa6.09□□□□□ -1.43
LRRC28-218ENST00000560236 PCDHA5Q9Y5H7 936 aa6.09□□□□□ -1.43
LRRC28-218ENST00000560236 A0A1W2PQ27 194 aa6.08□□□□□ -1.44
LRRC28-218ENST00000560236 A0A1W2PQ64 194 aa6.08□□□□□ -1.44
LRRC28-218ENST00000560236 A0A1W2PQC6 194 aa6.08□□□□□ -1.44
LRRC28-218ENST00000560236 A0A1W2PQD8 194 aa6.08□□□□□ -1.44
LRRC28-218ENST00000560236 GSNP06396 782 aa6.08□□□□□ -1.44
LRRC28-218ENST00000560236 CEBPAP49715 358 aaPredicted RBP6.08□□□□□ -1.44
LRRC28-218ENST00000560236 NCKAP1LP55160 1127 aa6.08□□□□□ -1.44
LRRC28-218ENST00000560236 SLITRK4Q8IW52 837 aa6.08□□□□□ -1.44
LRRC28-218ENST00000560236 SYT8Q8NBV8 401 aa6.08□□□□□ -1.44
LRRC28-218ENST00000560236 EAF1Q96JC9 268 aaPredicted RBP6.08□□□□□ -1.44
LRRC28-218ENST00000560236 JMJD8Q96S16 334 aa6.08□□□□□ -1.44
LRRC28-218ENST00000560236 SUCOQ9UBS9 1254 aaKnown RBP6.08□□□□□ -1.44
LRRC28-218ENST00000560236 FAM86C2PA6NEL3 165 aa6.07□□□□□ -1.44
LRRC28-218ENST00000560236 BUB1BO60566 1050 aaPredicted RBP6.07□□□□□ -1.44
LRRC28-218ENST00000560236 GSTM1P09488 218 aa6.07□□□□□ -1.44
LRRC28-218ENST00000560236 PLEKHN1Q494U1 663 aaPredicted RBP6.07□□□□□ -1.44
LRRC28-218ENST00000560236 RTP2Q5QGT7 225 aa6.07□□□□□ -1.44
LRRC28-218ENST00000560236 CWF19L1Q69YN2 538 aaKnown RBP6.07□□□□□ -1.44
LRRC28-218ENST00000560236 CCDC144CPQ8IYA2 1237 aa6.07□□□□□ -1.44
LRRC28-218ENST00000560236 C7orf61Q8IZ16 206 aa6.07□□□□□ -1.44
LRRC28-218ENST00000560236 LINC01356Q8N9X3 169 aa6.07□□□□□ -1.44
LRRC28-218ENST00000560236 TMEM52Q8NDY8 209 aa6.07□□□□□ -1.44
LRRC28-218ENST00000560236 NT5C1AQ9BXI3 368 aa6.07□□□□□ -1.44
LRRC28-218ENST00000560236 BCL2L13Q9BXK5 485 aa6.07□□□□□ -1.44
LRRC28-218ENST00000560236 BCL11AQ9H165 835 aa6.07□□□□□ -1.44
LRRC28-218ENST00000560236 LUC7LQ9NQ29 371 aaKnown RBP6.07□□□□□ -1.44
LRRC28-218ENST00000560236 CELA3BP08861 270 aa6.06□□□□□ -1.44
LRRC28-218ENST00000560236 MAPKAPK2P49137 400 aa6.06□□□□□ -1.44
LRRC28-218ENST00000560236 MRPL58Q14197 206 aaKnown RBP6.06□□□□□ -1.44
LRRC28-218ENST00000560236 NR1I3Q14994 352 aa6.06□□□□□ -1.44
LRRC28-218ENST00000560236 SKOR2Q2VWA4 1001 aaPredicted RBP6.06□□□□□ -1.44
LRRC28-218ENST00000560236 ZNF326Q5BKZ1 582 aaKnown RBP6.06□□□□□ -1.44
LRRC28-218ENST00000560236 HLA-DQA1Q5Y7H0 255 aa6.06□□□□□ -1.44
LRRC28-218ENST00000560236 INTS3Q68E01 1043 aaKnown RBP6.06□□□□□ -1.44
LRRC28-218ENST00000560236 ZC3H14Q6PJT7 736 aaKnown RBP6.06□□□□□ -1.44
LRRC28-218ENST00000560236 JAMLQ86YT9 394 aa6.06□□□□□ -1.44
LRRC28-218ENST00000560236 KIAA0825Q8IV33 1275 aa6.06□□□□□ -1.44
LRRC28-218ENST00000560236 JAG2Q9Y219 1238 aa6.06□□□□□ -1.44
LRRC28-218ENST00000560236 A0A1W2PQJ5 194 aa6.05□□□□□ -1.44
LRRC28-218ENST00000560236 C9IYK1 514 aa6.05□□□□□ -1.44
LRRC28-218ENST00000560236 SHOXO15266 292 aa6.05□□□□□ -1.44
LRRC28-218ENST00000560236 PFKLP17858 780 aa6.05□□□□□ -1.44
LRRC28-218ENST00000560236 ZNF200P98182 395 aaPredicted RBP6.05□□□□□ -1.44
LRRC28-218ENST00000560236 MVKQ03426 396 aa6.05□□□□□ -1.44
LRRC28-218ENST00000560236 NOL9Q5SY16 702 aaKnown RBP6.05□□□□□ -1.44
LRRC28-218ENST00000560236 DBX2Q6ZNG2 339 aa6.05□□□□□ -1.44
LRRC28-218ENST00000560236 PRRT2Q7Z6L0 340 aaPredicted RBP6.05□□□□□ -1.44
LRRC28-218ENST00000560236 GIPC2Q8TF65 315 aa6.05□□□□□ -1.44
LRRC28-218ENST00000560236 SPON2Q9BUD6 331 aa6.05□□□□□ -1.44
LRRC28-218ENST00000560236 SLC12A9Q9BXP2 914 aa6.05□□□□□ -1.44
LRRC28-218ENST00000560236 ZC3H12DA2A288 527 aaKnown RBP6.04□□□□□ -1.44
LRRC28-218ENST00000560236 MSL3P1P0C860 447 aa6.04□□□□□ -1.44
LRRC28-218ENST00000560236 ACRP10323 421 aa6.04□□□□□ -1.44
LRRC28-218ENST00000560236 PMS1P54277 932 aaKnown RBP6.04□□□□□ -1.44
LRRC28-218ENST00000560236 TDRD10Q5VZ19 366 aaKnown RBP6.04□□□□□ -1.44
LRRC28-218ENST00000560236 NLGN1Q8N2Q7 840 aa6.04□□□□□ -1.44
LRRC28-218ENST00000560236 TEPSINQ96N21 525 aa6.04□□□□□ -1.44
LRRC28-218ENST00000560236 GZF1Q9H116 711 aaPredicted RBP6.04□□□□□ -1.44
LRRC28-218ENST00000560236 ADAM7Q9H2U9 754 aa6.04□□□□□ -1.44
LRRC28-218ENST00000560236 IRS2Q9Y4H2 1338 aa6.03□□□□□ -1.44
LRRC28-218ENST00000560236 H0Y8X5 98 aa6.03□□□□□ -1.44
LRRC28-218ENST00000560236 FFAR3O14843 346 aa6.03□□□□□ -1.44
LRRC28-218ENST00000560236 IMPDH2P12268 514 aa6.03□□□□□ -1.44
LRRC28-218ENST00000560236 IGFBP6P24592 240 aaPredicted RBP6.03□□□□□ -1.44
LRRC28-218ENST00000560236 LIMS1P48059 325 aa6.03□□□□□ -1.44
LRRC28-218ENST00000560236 TARBP2Q15633 366 aaKnown RBP6.03□□□□□ -1.44
LRRC28-218ENST00000560236 BICRALQ6AI39 1079 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms