RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 RRP9O43818 475 aaKnown RBP16.4■□□□□ 0.22
RABGGTA-212ENST00000559974 KCNJ6P48051 423 aa16.4■□□□□ 0.22
RABGGTA-212ENST00000559974 PICALMQ13492 652 aa16.4■□□□□ 0.22
RABGGTA-212ENST00000559974 STRIP1Q5VSL9 837 aa16.4■□□□□ 0.22
RABGGTA-212ENST00000559974 CCDC12Q8WUD4 166 aaPredicted RBP16.4■□□□□ 0.22
RABGGTA-212ENST00000559974 MED15Q96RN5 788 aa16.4■□□□□ 0.22
RABGGTA-212ENST00000559974 GJA3Q9Y6H8 435 aa16.4■□□□□ 0.22
RABGGTA-212ENST00000559974 MYH4Q9Y623 1939 aa16.4■□□□□ 0.22
RABGGTA-212ENST00000559974 GRIN3BO60391 1043 aa16.4■□□□□ 0.22
RABGGTA-212ENST00000559974 CASP1P29466 404 aa16.4■□□□□ 0.22
RABGGTA-212ENST00000559974 GABPAQ06546 454 aa16.4■□□□□ 0.22
RABGGTA-212ENST00000559974 PDXDC2PQ6P474 469 aa16.4■□□□□ 0.22
RABGGTA-212ENST00000559974 USP17L2Q6R6M4 530 aa16.4■□□□□ 0.22
RABGGTA-212ENST00000559974 NYAP1Q6ZVC0 841 aa16.4■□□□□ 0.22
RABGGTA-212ENST00000559974 ZMYND12Q9H0C1 365 aa16.4■□□□□ 0.22
RABGGTA-212ENST00000559974 INTS13Q9NVM9 706 aa16.4■□□□□ 0.22
RABGGTA-212ENST00000559974 TTF2Q9UNY4 1162 aaKnown RBP16.4■□□□□ 0.22
RABGGTA-212ENST00000559974 TMEM232C9JQI7 657 aa16.39■□□□□ 0.21
RABGGTA-212ENST00000559974 VIL1P09327 827 aaKnown RBP16.39■□□□□ 0.21
RABGGTA-212ENST00000559974 CDK11BP21127 795 aaKnown RBP16.39■□□□□ 0.21
RABGGTA-212ENST00000559974 TXLNAP40222 546 aa16.39■□□□□ 0.21
RABGGTA-212ENST00000559974 RRP36Q96EU6 259 aaKnown RBP16.39■□□□□ 0.21
RABGGTA-212ENST00000559974 CPVLQ9H3G5 476 aa16.39■□□□□ 0.21
RABGGTA-212ENST00000559974 PAXBP1Q9Y5B6 917 aa16.39■□□□□ 0.21
RABGGTA-212ENST00000559974 GREB1LQ9C091 1923 aaPredicted RBP16.39■□□□□ 0.21
RABGGTA-212ENST00000559974 NAPAP54920 295 aa16.38■□□□□ 0.21
RABGGTA-212ENST00000559974 RBM10P98175 930 aaKnown RBP16.38■□□□□ 0.21
RABGGTA-212ENST00000559974 PTPN14Q15678 1187 aa16.38■□□□□ 0.21
RABGGTA-212ENST00000559974 INF2Q27J81 1249 aa16.38■□□□□ 0.21
RABGGTA-212ENST00000559974 HSP90AA4PQ58FG1 418 aa16.38■□□□□ 0.21
RABGGTA-212ENST00000559974 CEP135Q66GS9 1140 aa16.38■□□□□ 0.21
RABGGTA-212ENST00000559974 CIAPIN1Q6FI81 312 aa16.38■□□□□ 0.21
RABGGTA-212ENST00000559974 RSBN1LQ6PCB5 846 aaPredicted RBP16.38■□□□□ 0.21
RABGGTA-212ENST00000559974 GMLQ99445 158 aa16.38■□□□□ 0.21
RABGGTA-212ENST00000559974 SEC63Q9UGP8 760 aaKnown RBP16.38■□□□□ 0.21
RABGGTA-212ENST00000559974 SYNRGQ9UMZ2 1314 aa16.38■□□□□ 0.21
RABGGTA-212ENST00000559974 LAD1O00515 517 aa16.38■□□□□ 0.21
RABGGTA-212ENST00000559974 GTPBP6O43824 516 aaPredicted RBP16.38■□□□□ 0.21
RABGGTA-212ENST00000559974 DDNO94850 711 aaPredicted RBP16.38■□□□□ 0.21
RABGGTA-212ENST00000559974 EGFRP00533 1210 aa16.38■□□□□ 0.21
RABGGTA-212ENST00000559974 CD44P16070 742 aaKnown RBP16.38■□□□□ 0.21
RABGGTA-212ENST00000559974 CUL4BQ13620 913 aa16.38■□□□□ 0.21
RABGGTA-212ENST00000559974 HSP90AA2PQ14568 343 aaPredicted RBP16.38■□□□□ 0.21
RABGGTA-212ENST00000559974 DTHD1Q6ZMT9 781 aa16.38■□□□□ 0.21
RABGGTA-212ENST00000559974 CCDC112Q8NEF3 446 aa16.38■□□□□ 0.21
RABGGTA-212ENST00000559974 DDX4Q9NQI0 724 aaKnown RBP16.38■□□□□ 0.21
RABGGTA-212ENST00000559974 SAMSN1Q9NSI8 373 aaKnown RBP16.38■□□□□ 0.21
RABGGTA-212ENST00000559974 TRMT1Q9NXH9 659 aaKnown RBP16.38■□□□□ 0.21
RABGGTA-212ENST00000559974 MTMR4Q9NYA4 1195 aa16.38■□□□□ 0.21
RABGGTA-212ENST00000559974 GNA11P29992 359 aa16.37■□□□□ 0.21
RABGGTA-212ENST00000559974 SPATA1Q5VX52 437 aa16.37■□□□□ 0.21
RABGGTA-212ENST00000559974 E4F1Q66K89 784 aaPredicted RBP16.37■□□□□ 0.21
RABGGTA-212ENST00000559974 KRT25Q7Z3Z0 450 aa16.37■□□□□ 0.21
RABGGTA-212ENST00000559974 HOMER1Q86YM7 354 aa16.37■□□□□ 0.21
RABGGTA-212ENST00000559974 STAMQ92783 540 aa16.37■□□□□ 0.21
RABGGTA-212ENST00000559974 C6orf50Q9HD87 102 aa16.37■□□□□ 0.21
RABGGTA-212ENST00000559974 USP17L5A8MUK1 530 aa16.37■□□□□ 0.21
RABGGTA-212ENST00000559974 PPP1R3GB7ZBB8 358 aa16.37■□□□□ 0.21
RABGGTA-212ENST00000559974 PDHBP11177 359 aa16.37■□□□□ 0.21
RABGGTA-212ENST00000559974 GMPSP49915 693 aaPredicted RBP16.37■□□□□ 0.21
RABGGTA-212ENST00000559974 MTRQ99707 1265 aa16.37■□□□□ 0.21
RABGGTA-212ENST00000559974 TMEM60Q9H2L4 133 aa16.37■□□□□ 0.21
RABGGTA-212ENST00000559974 USP40Q9NVE5 1235 aa16.37■□□□□ 0.21
RABGGTA-212ENST00000559974 SWAP70Q9UH65 585 aa16.37■□□□□ 0.21
RABGGTA-212ENST00000559974 MYO3BQ8WXR4 1341 aa16.36■□□□□ 0.21
RABGGTA-212ENST00000559974 IGKV6D-41A0A0C4DH26 115 aa16.36■□□□□ 0.21
RABGGTA-212ENST00000559974 SMCO2A6NFE2 343 aa16.36■□□□□ 0.21
RABGGTA-212ENST00000559974 AKR1B1P15121 316 aa16.36■□□□□ 0.21
RABGGTA-212ENST00000559974 PRPHP41219 470 aa16.36■□□□□ 0.21
RABGGTA-212ENST00000559974 STAT6P42226 847 aa16.36■□□□□ 0.21
RABGGTA-212ENST00000559974 EIF6P56537 245 aaKnown RBP16.36■□□□□ 0.21
RABGGTA-212ENST00000559974 KLHL10Q6JEL2 608 aa16.36■□□□□ 0.21
RABGGTA-212ENST00000559974 HHIPL2Q6UWX4 724 aa16.36■□□□□ 0.21
RABGGTA-212ENST00000559974 PIGSQ96S52 555 aa16.36■□□□□ 0.21
RABGGTA-212ENST00000559974 BLZF1Q9H2G9 400 aa16.36■□□□□ 0.21
RABGGTA-212ENST00000559974 TMX1Q9H3N1 280 aa16.36■□□□□ 0.21
RABGGTA-212ENST00000559974 RIOX1Q9H6W3 641 aa16.36■□□□□ 0.21
RABGGTA-212ENST00000559974 DISC1Q9NRI5 854 aa16.36■□□□□ 0.21
RABGGTA-212ENST00000559974 SERPINB13Q9UIV8 391 aa16.36■□□□□ 0.21
RABGGTA-212ENST00000559974 hCG_1984214I3L0E3 225 aa16.35■□□□□ 0.21
RABGGTA-212ENST00000559974 KIF2AO00139 706 aaPredicted RBP16.35■□□□□ 0.21
RABGGTA-212ENST00000559974 TBX2Q13207 712 aaPredicted RBP16.35■□□□□ 0.21
RABGGTA-212ENST00000559974 NONOQ15233 471 aaKnown RBP eCLIP16.35■□□□□ 0.21
RABGGTA-212ENST00000559974 ASPRV1Q53RT3 343 aa16.35■□□□□ 0.21
RABGGTA-212ENST00000559974 SMYD4Q8IYR2 804 aaPredicted RBP16.35■□□□□ 0.21
RABGGTA-212ENST00000559974 ZNF713Q8N859 430 aaPredicted RBP16.35■□□□□ 0.21
RABGGTA-212ENST00000559974 TEKT1Q969V4 418 aa16.35■□□□□ 0.21
RABGGTA-212ENST00000559974 A0A1B0GTH6 734 aa16.35■□□□□ 0.21
RABGGTA-212ENST00000559974 ESYT2A0FGR8 921 aa16.35■□□□□ 0.21
RABGGTA-212ENST00000559974 CTIFO43310 598 aaKnown RBP16.35■□□□□ 0.21
RABGGTA-212ENST00000559974 CDC25AP30304 524 aa16.35■□□□□ 0.21
RABGGTA-212ENST00000559974 KARSQ15046 597 aaKnown RBP16.35■□□□□ 0.21
RABGGTA-212ENST00000559974 PTPN21Q16825 1174 aa16.35■□□□□ 0.21
RABGGTA-212ENST00000559974 SPECC1LQ69YQ0 1117 aa16.35■□□□□ 0.21
RABGGTA-212ENST00000559974 CDC42EP5Q6NZY7 148 aa16.35■□□□□ 0.21
RABGGTA-212ENST00000559974 LRRC47Q8N1G4 583 aaKnown RBP16.35■□□□□ 0.21
RABGGTA-212ENST00000559974 TSC1Q92574 1164 aa16.35■□□□□ 0.21
RABGGTA-212ENST00000559974 PPP1R13BQ96KQ4 1090 aa16.35■□□□□ 0.21
RABGGTA-212ENST00000559974 MAP7D2Q96T17 732 aa16.35■□□□□ 0.21
RABGGTA-212ENST00000559974 VAT1LQ9HCJ6 419 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms