RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 THSD7BQ9C0I4 1608 aa19.11■□□□□ 0.65
TPM1-219ENST00000559397 CNTNAP5Q8WYK1 1306 aa19.11■□□□□ 0.65
TPM1-219ENST00000559397 IKQ13123 557 aaPredicted RBP19.11■□□□□ 0.65
TPM1-219ENST00000559397 CCDC82Q8N4S0 544 aa19.11■□□□□ 0.65
TPM1-219ENST00000559397 KIFC2Q96AC6 838 aa19.11■□□□□ 0.65
TPM1-219ENST00000559397 MTMR8Q96EF0 704 aa19.11■□□□□ 0.65
TPM1-219ENST00000559397 P2RX7Q99572 595 aaKnown RBP19.11■□□□□ 0.65
TPM1-219ENST00000559397 JMJD4Q9H9V9 463 aa19.11■□□□□ 0.65
TPM1-219ENST00000559397 ADAMTS5Q9UNA0 930 aa19.11■□□□□ 0.65
TPM1-219ENST00000559397 TCHHQ07283 1943 aa19.1■□□□□ 0.65
TPM1-219ENST00000559397 MYPNQ86TC9 1320 aa19.1■□□□□ 0.65
TPM1-219ENST00000559397 STK36Q9NRP7 1315 aa19.1■□□□□ 0.65
TPM1-219ENST00000559397 H3BQV1 296 aa19.1■□□□□ 0.65
TPM1-219ENST00000559397 OSBPP22059 807 aa19.1■□□□□ 0.65
TPM1-219ENST00000559397 MAP2K2P36507 400 aa19.1■□□□□ 0.65
TPM1-219ENST00000559397 RESTQ13127 1097 aa19.1■□□□□ 0.65
TPM1-219ENST00000559397 IFFO2Q5TF58 517 aa19.1■□□□□ 0.65
TPM1-219ENST00000559397 POTEEQ6S8J3 1075 aa19.1■□□□□ 0.65
TPM1-219ENST00000559397 REM2Q8IYK8 340 aaPredicted RBP19.1■□□□□ 0.65
TPM1-219ENST00000559397 HOXC10Q9NYD6 342 aa19.1■□□□□ 0.65
TPM1-219ENST00000559397 PNMA3Q9UL41 463 aa19.1■□□□□ 0.65
TPM1-219ENST00000559397 SPDYE16A6NNV3 312 aaPredicted RBP19.09■□□□□ 0.65
TPM1-219ENST00000559397 PRPF40AO75400 957 aaKnown RBP19.09■□□□□ 0.65
TPM1-219ENST00000559397 IRX3P78415 501 aaPredicted RBP19.09■□□□□ 0.65
TPM1-219ENST00000559397 PHKBQ93100 1093 aa19.09■□□□□ 0.65
TPM1-219ENST00000559397 ATG4CQ96DT6 458 aa19.09■□□□□ 0.65
TPM1-219ENST00000559397 RANBP17Q9H2T7 1088 aaKnown RBP19.09■□□□□ 0.65
TPM1-219ENST00000559397 ZSCAN16Q9H4T2 348 aaPredicted RBP19.09■□□□□ 0.65
TPM1-219ENST00000559397 VAT1LQ9HCJ6 419 aa19.09■□□□□ 0.65
TPM1-219ENST00000559397 A0A0G2JMZ2 1700 aa19.09■□□□□ 0.65
TPM1-219ENST00000559397 PCNTO95613 3336 aa19.08■□□□□ 0.65
TPM1-219ENST00000559397 PPFIA3O75145 1194 aa19.08■□□□□ 0.65
TPM1-219ENST00000559397 CYP2C8P10632 490 aa19.08■□□□□ 0.65
TPM1-219ENST00000559397 LBX2Q6XYB7 198 aa19.08■□□□□ 0.65
TPM1-219ENST00000559397 FERMT3Q86UX7 667 aa19.08■□□□□ 0.65
TPM1-219ENST00000559397 SLC38A10Q9HBR0 1119 aa19.08■□□□□ 0.65
TPM1-219ENST00000559397 VWA5AO00534 786 aa19.08■□□□□ 0.64
TPM1-219ENST00000559397 FMNL1O95466 1100 aaPredicted RBP19.08■□□□□ 0.64
TPM1-219ENST00000559397 HERVK_113P62684 666 aa19.08■□□□□ 0.64
TPM1-219ENST00000559397 FOXD4L6Q3SYB3 417 aaPredicted RBP19.08■□□□□ 0.64
TPM1-219ENST00000559397 SAMD1Q6SPF0 538 aaPredicted RBP19.08■□□□□ 0.64
TPM1-219ENST00000559397 FOXD4L3Q6VB84 417 aaPredicted RBP19.08■□□□□ 0.64
TPM1-219ENST00000559397 REPS2Q8NFH8 660 aa19.08■□□□□ 0.64
TPM1-219ENST00000559397 FBXO18Q8NFZ0 1043 aa19.08■□□□□ 0.64
TPM1-219ENST00000559397 PIGSQ96S52 555 aa19.08■□□□□ 0.64
TPM1-219ENST00000559397 RNF26Q9BY78 433 aaPredicted RBP19.08■□□□□ 0.64
TPM1-219ENST00000559397 COL11A1P12107 1806 aaPredicted RBP19.08■□□□□ 0.64
TPM1-219ENST00000559397 PRPF3O43395 683 aaKnown RBP19.07■□□□□ 0.64
TPM1-219ENST00000559397 SNAP25P60880 206 aa19.07■□□□□ 0.64
TPM1-219ENST00000559397 DNM1Q05193 864 aaKnown RBP19.07■□□□□ 0.64
TPM1-219ENST00000559397 KLHL40Q2TBA0 621 aa19.07■□□□□ 0.64
TPM1-219ENST00000559397 OTUD7BQ6GQQ9 843 aa19.07■□□□□ 0.64
TPM1-219ENST00000559397 C8orf76Q96K31 380 aa19.07■□□□□ 0.64
TPM1-219ENST00000559397 SLC26A6Q9BXS9 759 aa19.07■□□□□ 0.64
TPM1-219ENST00000559397 CNPY2Q9Y2B0 182 aa19.07■□□□□ 0.64
TPM1-219ENST00000559397 V9GY48 417 aaPredicted RBP19.07■□□□□ 0.64
TPM1-219ENST00000559397 MYH6P13533 1939 aa19.06■□□□□ 0.64
TPM1-219ENST00000559397 hCG_1642624A0A1W2PR95 340 aa19.06■□□□□ 0.64
TPM1-219ENST00000559397 FDX1P10109 184 aa19.06■□□□□ 0.64
TPM1-219ENST00000559397 SSRP1Q08945 709 aaKnown RBP19.06■□□□□ 0.64
TPM1-219ENST00000559397 CDC37Q16543 378 aaPredicted RBP19.06■□□□□ 0.64
TPM1-219ENST00000559397 PARK7Q99497 189 aaKnown RBP19.06■□□□□ 0.64
TPM1-219ENST00000559397 ZBTB5O15062 677 aa19.05■□□□□ 0.64
TPM1-219ENST00000559397 PKN1Q16512 942 aa19.05■□□□□ 0.64
TPM1-219ENST00000559397 QRICH1Q2TAL8 776 aa19.05■□□□□ 0.64
TPM1-219ENST00000559397 HOMER1Q86YM7 354 aa19.05■□□□□ 0.64
TPM1-219ENST00000559397 PIBF1Q8WXW3 757 aa19.05■□□□□ 0.64
TPM1-219ENST00000559397 RRP36Q96EU6 259 aaKnown RBP19.05■□□□□ 0.64
TPM1-219ENST00000559397 ZNF536O15090 1300 aa19.05■□□□□ 0.64
TPM1-219ENST00000559397 CEP350Q5VT06 3117 aa19.05■□□□□ 0.64
TPM1-219ENST00000559397 PNMA6FA0A0J9YX94 578 aa19.05■□□□□ 0.64
TPM1-219ENST00000559397 ZBED4O75132 1171 aa19.05■□□□□ 0.64
TPM1-219ENST00000559397 CNMDO75829 334 aa19.05■□□□□ 0.64
TPM1-219ENST00000559397 TMEM132BQ14DG7 1078 aa19.05■□□□□ 0.64
TPM1-219ENST00000559397 DNAJC5GQ8N7S2 189 aa19.05■□□□□ 0.64
TPM1-219ENST00000559397 MB21D1Q8N884 522 aa19.05■□□□□ 0.64
TPM1-219ENST00000559397 GTF3C2Q8WUA4 911 aaPredicted RBP19.05■□□□□ 0.64
TPM1-219ENST00000559397 ALG1Q9BT22 464 aa19.05■□□□□ 0.64
TPM1-219ENST00000559397 GDPD2Q9HCC8 539 aa19.05■□□□□ 0.64
TPM1-219ENST00000559397 RBPJLQ9UBG7 517 aa19.05■□□□□ 0.64
TPM1-219ENST00000559397 DDX49Q9Y6V7 483 aaKnown RBP19.05■□□□□ 0.64
TPM1-219ENST00000559397 ADGRA2Q96PE1 1338 aa19.04■□□□□ 0.64
TPM1-219ENST00000559397 PPP1R11O60927 126 aaPredicted RBP19.04■□□□□ 0.64
TPM1-219ENST00000559397 FOSBP53539 338 aa19.04■□□□□ 0.64
TPM1-219ENST00000559397 KRT85P78386 507 aa19.04■□□□□ 0.64
TPM1-219ENST00000559397 TAF1CQ15572 869 aaPredicted RBP19.04■□□□□ 0.64
TPM1-219ENST00000559397 FAM173BQ6P4H8 233 aa19.04■□□□□ 0.64
TPM1-219ENST00000559397 CCDC174Q6PII3 467 aa19.04■□□□□ 0.64
TPM1-219ENST00000559397 TRIM22Q8IYM9 498 aa19.04■□□□□ 0.64
TPM1-219ENST00000559397 TXNRD2Q9NNW7 524 aa19.04■□□□□ 0.64
TPM1-219ENST00000559397 BTBD7Q9P203 1132 aa19.04■□□□□ 0.64
TPM1-219ENST00000559397 RBM27Q9P2N5 1060 aaKnown RBP19.04■□□□□ 0.64
TPM1-219ENST00000559397 ZNF214Q9UL59 606 aaPredicted RBP19.04■□□□□ 0.64
TPM1-219ENST00000559397 SMCHD1A6NHR9 2005 aa19.03■□□□□ 0.64
TPM1-219ENST00000559397 ATP2A1O14983 1001 aa19.03■□□□□ 0.64
TPM1-219ENST00000559397 PEX10O60683 326 aa19.03■□□□□ 0.64
TPM1-219ENST00000559397 DEXIO95424 95 aa19.03■□□□□ 0.64
TPM1-219ENST00000559397 ALDH1A1P00352 501 aa19.03■□□□□ 0.64
TPM1-219ENST00000559397 OAZ1P54368 228 aa19.03■□□□□ 0.64
TPM1-219ENST00000559397 AKAP17AQ02040 695 aaKnown RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms