RNA–Protein interactions for RNA: ENST00000558014.5

SEMA6D-208, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 6,028 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-208ENST00000558014 HNRNPDLO14979 420 aaKnown RBP15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 GTF2F1P35269 517 aaKnown RBP eCLIP15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 CCDC6Q16204 474 aa15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 UBE2SQ16763 222 aa15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 SLFN12Q8IYM2 578 aa15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 DNAJC5Q9H3Z4 198 aa15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 PIK3CAP42336 1068 aa15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 TMC4Q7Z404 712 aa15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 TRIM50Q86XT4 487 aa15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 ATRIPQ8WXE1 791 aa15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 HESX1Q9UBX0 185 aa15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 FNDC3AQ9Y2H6 1198 aaKnown RBP15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 CRKP46108 304 aa15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 KLHL30Q0D2K2 578 aa15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 MIS18BP1Q6P0N0 1132 aa15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 SYT10Q6XYQ8 523 aa15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 NME8Q8N427 588 aa15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 GANCQ8TET4 914 aa15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 MTRF1LQ9UGC7 380 aaKnown RBP15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 BLMP54132 1417 aaPredicted RBP15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 TFDP1Q14186 410 aa15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 SND1Q7KZF4 910 aaKnown RBP eCLIP15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 PPM1KQ8N3J5 372 aa15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 PI4K2BQ8TCG2 481 aa15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 BAG1Q99933 345 aaPredicted RBP15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 SLC7A3Q8WY07 619 aa15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 CCDC17Q96LX7 622 aa15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 KANSL2Q9H9L4 492 aa15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 GPBP1L1Q9HC44 474 aaPredicted RBP15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 KDM3AQ9Y4C1 1321 aa15.12■□□□□ 0.01
SEMA6D-208ENST00000558014 ITIH3Q06033 890 aa15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 VWA3BQ502W6 1294 aa15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 C7orf31Q8N865 590 aa15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 CEP170P1Q96L14 293 aa15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 LLPHQ9BRT6 129 aaKnown RBP15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 DBNLQ9UJU6 430 aaKnown RBP15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 MAGED2Q9UNF1 606 aaPredicted RBP15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 SYDE2Q5VT97 1194 aa15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 RRAGAQ7L523 313 aa15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 CNGA4Q8IV77 575 aa15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 AXIN2Q9Y2T1 843 aa15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 OR52Z1P0C646 297 aa15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 ME3Q16798 604 aa15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 ODR4Q5SWX8 454 aa15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 U2AF1L4Q8WU68 220 aaKnown RBP15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 ZNF653Q96CK0 615 aa15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 NLRP4Q96MN2 994 aa15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 PNMA3Q9UL41 463 aa15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 ZNF668Q96K58 619 aaPredicted RBP15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 PCIF1Q9H4Z3 704 aa15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 ASIC3Q9UHC3 531 aa15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 RABGAP1Q9Y3P9 1069 aa15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 BTBD18B2RXH4 712 aa15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 LACTBP83111 547 aaPredicted RBP15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 TYW1BQ6NUM6 668 aa15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 ATG3Q9NT62 314 aa15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.11■□□□□ 0.01
SEMA6D-208ENST00000558014 HGSO14964 777 aaPredicted RBP15.1■□□□□ 0.01
SEMA6D-208ENST00000558014 CUL4BQ13620 913 aa15.1■□□□□ 0.01
SEMA6D-208ENST00000558014 PPP2R5BQ15173 497 aa15.1■□□□□ 0.01
SEMA6D-208ENST00000558014 HEG1Q9ULI3 1381 aa15.1■□□□□ 0.01
SEMA6D-208ENST00000558014 XPAP23025 273 aaPredicted RBP15.1■□□□□ 0.01
SEMA6D-208ENST00000558014 UBL4BQ8N7F7 174 aa15.1■□□□□ 0.01
SEMA6D-208ENST00000558014 PARD3BQ8TEW8 1205 aa15.1■□□□□ 0.01
SEMA6D-208ENST00000558014 RAVER2Q9HCJ3 691 aaKnown RBP15.1■□□□□ 0.01
SEMA6D-208ENST00000558014 ADCY9O60503 1353 aa15.1■□□□□ 0.01
SEMA6D-208ENST00000558014 SF3A3Q12874 501 aaKnown RBP eCLIP15.1■□□□□ 0.01
SEMA6D-208ENST00000558014 KSR1Q8IVT5 923 aa15.1■□□□□ 0.01
SEMA6D-208ENST00000558014 COA1Q9GZY4 146 aa15.1■□□□□ 0.01
SEMA6D-208ENST00000558014 ADGBQ8N7X0 1667 aa15.1■□□□□ 0.01
SEMA6D-208ENST00000558014 GIPC1O14908 333 aa15.1■□□□□ 0.01
SEMA6D-208ENST00000558014 CLIC6Q96NY7 704 aa15.1■□□□□ 0.01
SEMA6D-208ENST00000558014 TRIM7Q9C029 511 aa15.1■□□□□ 0.01
SEMA6D-208ENST00000558014 C1orf112Q9NSG2 853 aa15.1■□□□□ 0.01
SEMA6D-208ENST00000558014 STAM2O75886 525 aa15.09■□□□□ 0.01
SEMA6D-208ENST00000558014 XRCC5P13010 732 aaKnown RBP15.09■□□□□ 0.01
SEMA6D-208ENST00000558014 YWHAEP62258 255 aaKnown RBP15.09■□□□□ 0.01
SEMA6D-208ENST00000558014 TNNC1P63316 161 aa15.09■□□□□ 0.01
SEMA6D-208ENST00000558014 PRAMEF18Q5VWM3 479 aa15.09■□□□□ 0.01
SEMA6D-208ENST00000558014 SH3RF3Q8TEJ3 882 aaPredicted RBP15.09■□□□□ 0.01
SEMA6D-208ENST00000558014 KLHL7Q8IXQ5 586 aa15.09■□□□□ 0.01
SEMA6D-208ENST00000558014 CSRNP2Q9H175 543 aa15.09■□□□□ 0.01
SEMA6D-208ENST00000558014 ZNF215Q9UL58 517 aaPredicted RBP15.09■□□□□ 0.01
SEMA6D-208ENST00000558014 PPP1R2P41236 205 aa15.09■□□□□ 0.01
SEMA6D-208ENST00000558014 SLC9C1Q4G0N8 1177 aa15.09■□□□□ 0.01
SEMA6D-208ENST00000558014 IRAK4Q9NWZ3 460 aa15.09■□□□□ 0.01
SEMA6D-208ENST00000558014 CYP27B1O15528 508 aa15.09■□□□□ 0.01
SEMA6D-208ENST00000558014 CEP104O60308 925 aa15.09■□□□□ 0.01
SEMA6D-208ENST00000558014 SAT1P21673 171 aa15.09■□□□□ 0.01
SEMA6D-208ENST00000558014 ZNF827Q17R98 1081 aa15.09■□□□□ 0.01
SEMA6D-208ENST00000558014 METTL23Q86XA0 190 aa15.09■□□□□ 0.01
SEMA6D-208ENST00000558014 CEP57Q86XR8 500 aa15.09■□□□□ 0.01
SEMA6D-208ENST00000558014 MYOCDQ8IZQ8 938 aa15.09■□□□□ 0.01
SEMA6D-208ENST00000558014 PRPF38AQ8NAV1 312 aaKnown RBP15.09■□□□□ 0.01
SEMA6D-208ENST00000558014 TFAMQ00059 246 aaKnown RBP15.09■□□□□ 0.01
SEMA6D-208ENST00000558014 FAM83BQ5T0W9 1011 aa15.09■□□□□ 0.01
SEMA6D-208ENST00000558014 CCDC89Q8N998 374 aa15.09■□□□□ 0.01
SEMA6D-208ENST00000558014 RAET1EQ8TD07 263 aa15.09■□□□□ 0.01
SEMA6D-208ENST00000558014 SNX21Q969T3 373 aa15.09■□□□□ 0.01
SEMA6D-208ENST00000558014 TMEM106CQ9BVX2 250 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms