RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-223	ENST00000556142	GPATCH4	Q5T3I0	446 aa	Known RBP	10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	C4orf32	Q8N8J7	132 aa		10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	KRI1	Q8N9T8	703 aa	Known RBP	10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	ZNF579	Q8NAF0	562 aa	Known RBP	10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	GMCL1P1	Q8NEA9	526 aa		10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	CCDC148	Q8NFR7	591 aa		10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	TIGD1	Q96MW7	591 aa		10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	TRIM34	Q9BYJ4	488 aa		10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	TMEM39B	Q9GZU3	492 aa		10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	VAT1L	Q9HCJ6	419 aa		10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	GPCPD1	Q9NPB8	672 aa		10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	SYNPO2	Q9UMS6	1093 aa		10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142	MRVI1	Q9Y6F6	885 aa		10.86	□□□□□ -0.67
HNRNPC-223	ENST00000556142		A0A1W2PRG0	241 aa		10.85	□□□□□ -0.67
HNRNPC-223	ENST00000556142	ESYT2	A0FGR8	921 aa		10.85	□□□□□ -0.67
HNRNPC-223	ENST00000556142	TRIM75P	A6NK02	468 aa		10.85	□□□□□ -0.67
HNRNPC-223	ENST00000556142	hCG_1984214	I3L0E3	225 aa		10.85	□□□□□ -0.67
HNRNPC-223	ENST00000556142	ZNF202	O95125	648 aa		10.85	□□□□□ -0.67
HNRNPC-223	ENST00000556142	GMPS	P49915	693 aa	Predicted RBP	10.85	□□□□□ -0.67
HNRNPC-223	ENST00000556142	ICA1	Q05084	483 aa		10.85	□□□□□ -0.67
HNRNPC-223	ENST00000556142	TYRO3	Q06418	890 aa		10.85	□□□□□ -0.67
HNRNPC-223	ENST00000556142	UVSSA	Q2YD98	709 aa		10.85	□□□□□ -0.67
HNRNPC-223	ENST00000556142	TTC38	Q5R3I4	469 aa		10.85	□□□□□ -0.67
HNRNPC-223	ENST00000556142	SLFN13	Q68D06	897 aa		10.85	□□□□□ -0.67
HNRNPC-223	ENST00000556142	PIK3AP1	Q6ZUJ8	805 aa		10.85	□□□□□ -0.67
HNRNPC-223	ENST00000556142	HEATR3	Q7Z4Q2	680 aa		10.85	□□□□□ -0.67
HNRNPC-223	ENST00000556142	CKAP2L	Q8IYA6	745 aa		10.85	□□□□□ -0.67
HNRNPC-223	ENST00000556142	ADGRF4	Q8IZF3	695 aa		10.85	□□□□□ -0.67
HNRNPC-223	ENST00000556142	ZNF713	Q8N859	430 aa	Predicted RBP	10.85	□□□□□ -0.67
HNRNPC-223	ENST00000556142	CAPNS2	Q96L46	248 aa		10.85	□□□□□ -0.67
HNRNPC-223	ENST00000556142	TEPSIN	Q96N21	525 aa		10.85	□□□□□ -0.67
HNRNPC-223	ENST00000556142	VEZT	Q9HBM0	779 aa		10.85	□□□□□ -0.67
HNRNPC-223	ENST00000556142	NOL7	Q9UMY1	257 aa	Known RBP	10.85	□□□□□ -0.67
HNRNPC-223	ENST00000556142	CEP131	Q9UPN4	1083 aa		10.85	□□□□□ -0.67
HNRNPC-223	ENST00000556142	THSD7B	Q9C0I4	1608 aa		10.84	□□□□□ -0.67
HNRNPC-223	ENST00000556142	MYH8	P13535	1937 aa		10.84	□□□□□ -0.67
HNRNPC-223	ENST00000556142	PNMA6F	A0A0J9YX94	578 aa		10.84	□□□□□ -0.67
HNRNPC-223	ENST00000556142		F5H6K3	240 aa		10.84	□□□□□ -0.67
HNRNPC-223	ENST00000556142	MYO1B	O43795	1136 aa		10.84	□□□□□ -0.67
HNRNPC-223	ENST00000556142	PPP1R11	O60927	126 aa	Predicted RBP	10.84	□□□□□ -0.67
HNRNPC-223	ENST00000556142	CCDC192	P0DO97	292 aa		10.84	□□□□□ -0.67
HNRNPC-223	ENST00000556142	ATP2C1	P98194	919 aa	Predicted RBP	10.84	□□□□□ -0.67
HNRNPC-223	ENST00000556142	ATP2B2	Q01814	1243 aa		10.84	□□□□□ -0.67
HNRNPC-223	ENST00000556142	KLRC3	Q07444	240 aa		10.84	□□□□□ -0.67
HNRNPC-223	ENST00000556142	GRM1	Q13255	1194 aa		10.84	□□□□□ -0.67
HNRNPC-223	ENST00000556142	ZNF174	Q15697	407 aa		10.84	□□□□□ -0.67
HNRNPC-223	ENST00000556142	KCTD1	Q719H9	257 aa		10.84	□□□□□ -0.67
HNRNPC-223	ENST00000556142	MICALL2	Q8IY33	904 aa		10.84	□□□□□ -0.67
HNRNPC-223	ENST00000556142	ELOA2	Q8IYF1	753 aa	Predicted RBP	10.84	□□□□□ -0.67
HNRNPC-223	ENST00000556142	RASGRP4	Q8TDF6	673 aa		10.84	□□□□□ -0.67
HNRNPC-223	ENST00000556142	GMCL1	Q96IK5	515 aa		10.84	□□□□□ -0.67
HNRNPC-223	ENST00000556142	PPP1R9B	Q96SB3	815 aa		10.84	□□□□□ -0.67
HNRNPC-223	ENST00000556142	CNOT7	Q9UIV1	285 aa	Known RBP	10.84	□□□□□ -0.67
HNRNPC-223	ENST00000556142	TNRC18	O15417	2968 aa	Predicted RBP	10.84	□□□□□ -0.67
HNRNPC-223	ENST00000556142	SMCO2	A6NFE2	343 aa		10.83	□□□□□ -0.68
HNRNPC-223	ENST00000556142	PHF20L1	A8MW92	1017 aa		10.83	□□□□□ -0.68
HNRNPC-223	ENST00000556142	USP17L10	C9JJH3	530 aa		10.83	□□□□□ -0.68
HNRNPC-223	ENST00000556142	EDIL3	O43854	480 aa		10.83	□□□□□ -0.68
HNRNPC-223	ENST00000556142	KIN	O60870	393 aa	Known RBP	10.83	□□□□□ -0.68
HNRNPC-223	ENST00000556142	BMP15	O95972	392 aa		10.83	□□□□□ -0.68
HNRNPC-223	ENST00000556142	NDUFB10	O96000	172 aa		10.83	□□□□□ -0.68
HNRNPC-223	ENST00000556142	ATP2B1	P20020	1258 aa		10.83	□□□□□ -0.68
HNRNPC-223	ENST00000556142	NAPA	P54920	295 aa		10.83	□□□□□ -0.68
HNRNPC-223	ENST00000556142	RASA3	Q14644	834 aa		10.83	□□□□□ -0.68
HNRNPC-223	ENST00000556142	BTNL9	Q6UXG8	535 aa		10.83	□□□□□ -0.68
HNRNPC-223	ENST00000556142	SAMD7	Q7Z3H4	446 aa		10.83	□□□□□ -0.68
HNRNPC-223	ENST00000556142	HOMER1	Q86YM7	354 aa		10.83	□□□□□ -0.68
HNRNPC-223	ENST00000556142	RNF214	Q8ND24	703 aa		10.83	□□□□□ -0.68
HNRNPC-223	ENST00000556142	CCDC12	Q8WUD4	166 aa	Predicted RBP	10.83	□□□□□ -0.68
HNRNPC-223	ENST00000556142	COA7	Q96BR5	231 aa		10.83	□□□□□ -0.68
HNRNPC-223	ENST00000556142	SEC63	Q9UGP8	760 aa	Known RBP	10.83	□□□□□ -0.68
HNRNPC-223	ENST00000556142	ZBTB5	O15062	677 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	GNA11	P29992	359 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	SLC16A2	P36021	539 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	SYK	P43405	635 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	CLK2	P49760	499 aa	Known RBP	10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	IL17A	Q16552	155 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	CCDC96	Q2M329	555 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	KIAA1755	Q5JYT7	1200 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	CYP4F22	Q6NT55	531 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	MIGA2	Q7L4E1	593 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	GPC2	Q8N158	579 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	PDLIM2	Q96JY6	352 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	CSRNP2	Q9H175	543 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	C6orf50	Q9HD87	102 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	TSKS	Q9UJT2	592 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	ZBTB21	Q9ULJ3	1066 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	TMX2	Q9Y320	296 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	ASTN2	O75129	1339 aa	Predicted RBP	10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	CAP2	P40123	477 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	SLC1A4	P43007	532 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	TNNI2	P48788	182 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	MDM2	Q00987	491 aa	Predicted RBP	10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	PTGDR	Q13258	359 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	SPECC1	Q5M775	1068 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	PPP1R18	Q6NYC8	613 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	USP49	Q70CQ1	688 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	ACER1	Q8TDN7	264 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	FERMT2	Q96AC1	680 aa		10.82	□□□□□ -0.68

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