RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 TSEN34Q9BSV6 310 aaKnown RBP12.68□□□□□ -0.38
PNN-203ENST00000554117 STARD7Q9NQZ5 370 aa12.68□□□□□ -0.38
PNN-203ENST00000554117 DIAPH3Q9NSV4 1193 aa12.68□□□□□ -0.38
PNN-203ENST00000554117 ANAPC4Q9UJX5 808 aa12.68□□□□□ -0.38
PNN-203ENST00000554117 TACC3Q9Y6A5 838 aa12.68□□□□□ -0.38
PNN-203ENST00000554117 ZMYM6O95789 1325 aa12.67□□□□□ -0.38
PNN-203ENST00000554117 CCDC171Q6TFL3 1326 aa12.67□□□□□ -0.38
PNN-203ENST00000554117 MOXD2PA6NHM9 499 aa12.67□□□□□ -0.38
PNN-203ENST00000554117 DCDC2CA8MYV0 355 aa12.67□□□□□ -0.38
PNN-203ENST00000554117 B4DLN1 442 aa12.67□□□□□ -0.38
PNN-203ENST00000554117 TLR3O15455 904 aaKnown RBP12.67□□□□□ -0.38
PNN-203ENST00000554117 PLA2G6O60733 806 aa12.67□□□□□ -0.38
PNN-203ENST00000554117 ALAS1P13196 640 aa12.67□□□□□ -0.38
PNN-203ENST00000554117 MCCP23508 829 aa12.67□□□□□ -0.38
PNN-203ENST00000554117 MRPL12P52815 198 aaKnown RBP12.67□□□□□ -0.38
PNN-203ENST00000554117 ALX1Q15699 326 aa12.67□□□□□ -0.38
PNN-203ENST00000554117 CCDC178Q5BJE1 867 aa12.67□□□□□ -0.38
PNN-203ENST00000554117 C1orf53Q5VUE5 145 aa12.67□□□□□ -0.38
PNN-203ENST00000554117 MAMDC4Q6UXC1 1216 aa12.67□□□□□ -0.38
PNN-203ENST00000554117 TRERF1Q96PN7 1200 aa12.67□□□□□ -0.38
PNN-203ENST00000554117 RNF146Q9NTX7 359 aa12.67□□□□□ -0.38
PNN-203ENST00000554117 ZNF213O14771 459 aa12.66□□□□□ -0.38
PNN-203ENST00000554117 ORC4O43929 436 aa12.66□□□□□ -0.38
PNN-203ENST00000554117 ZEB2O60315 1214 aa12.66□□□□□ -0.38
PNN-203ENST00000554117 DUSP11O75319 330 aaKnown RBP12.66□□□□□ -0.38
PNN-203ENST00000554117 PGK1P00558 417 aa12.66□□□□□ -0.38
PNN-203ENST00000554117 CLTBP09497 229 aa12.66□□□□□ -0.38
PNN-203ENST00000554117 C6orf222P0C671 652 aaPredicted RBP12.66□□□□□ -0.38
PNN-203ENST00000554117 TOP1P11387 765 aaKnown RBP12.66□□□□□ -0.38
PNN-203ENST00000554117 RAG1P15918 1043 aa12.66□□□□□ -0.38
PNN-203ENST00000554117 ACVR2BQ13705 512 aa12.66□□□□□ -0.38
PNN-203ENST00000554117 TRIM60Q495X7 471 aa12.66□□□□□ -0.38
PNN-203ENST00000554117 CCDC174Q6PII3 467 aa12.66□□□□□ -0.38
PNN-203ENST00000554117 KCTD1Q719H9 257 aa12.66□□□□□ -0.38
PNN-203ENST00000554117 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.66□□□□□ -0.38
PNN-203ENST00000554117 IQCA1Q86XH1 822 aa12.66□□□□□ -0.38
PNN-203ENST00000554117 ESR2Q92731 530 aa12.66□□□□□ -0.38
PNN-203ENST00000554117 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.66□□□□□ -0.38
PNN-203ENST00000554117 ADD3Q9UEY8 706 aaKnown RBP12.66□□□□□ -0.38
PNN-203ENST00000554117 CCPG1Q9ULG6 757 aa12.66□□□□□ -0.38
PNN-203ENST00000554117 PHF24Q9UPV7 400 aa12.66□□□□□ -0.38
PNN-203ENST00000554117 TRIP12Q14669 1992 aaPredicted RBP12.66□□□□□ -0.38
PNN-203ENST00000554117 SALL3Q9BXA9 1300 aa12.65□□□□□ -0.38
PNN-203ENST00000554117 A0A1W2PQ45 241 aaPredicted RBP12.65□□□□□ -0.38
PNN-203ENST00000554117 A0A1W2PQY0 241 aa12.65□□□□□ -0.38
PNN-203ENST00000554117 IGHA2P01877 340 aa12.65□□□□□ -0.38
PNN-203ENST00000554117 ZNF865P0CJ78 1059 aaPredicted RBP12.65□□□□□ -0.38
PNN-203ENST00000554117 HSPD1P10809 573 aaKnown RBP12.65□□□□□ -0.38
PNN-203ENST00000554117 NMIQ13287 307 aaPredicted RBP12.65□□□□□ -0.38
PNN-203ENST00000554117 ARMCX2Q7L311 632 aa12.65□□□□□ -0.38
PNN-203ENST00000554117 CHD1LQ86WJ1 897 aa12.65□□□□□ -0.38
PNN-203ENST00000554117 DEFB123Q8N688 67 aa12.65□□□□□ -0.38
PNN-203ENST00000554117 CHMP4CQ96CF2 233 aa12.65□□□□□ -0.38
PNN-203ENST00000554117 LRCH3Q96II8 777 aa12.65□□□□□ -0.38
PNN-203ENST00000554117 AP5M1Q9H0R1 490 aa12.65□□□□□ -0.38
PNN-203ENST00000554117 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.65□□□□□ -0.38
PNN-203ENST00000554117 RIPK3Q9Y572 518 aa12.65□□□□□ -0.38
PNN-203ENST00000554117 SYNRGQ9UMZ2 1314 aa12.64□□□□□ -0.39
PNN-203ENST00000554117 DNAJC25-GNG10A0A024R161 153 aa12.64□□□□□ -0.39
PNN-203ENST00000554117 PQBP1O60828 265 aaKnown RBP12.64□□□□□ -0.39
PNN-203ENST00000554117 FGAP02671 866 aa12.64□□□□□ -0.39
PNN-203ENST00000554117 ACLYP53396 1101 aa12.64□□□□□ -0.39
PNN-203ENST00000554117 SNX17Q15036 470 aa12.64□□□□□ -0.39
PNN-203ENST00000554117 CCDC144BQ3MJ40 725 aa12.64□□□□□ -0.39
PNN-203ENST00000554117 AKNAD1Q5T1N1 836 aa12.64□□□□□ -0.39
PNN-203ENST00000554117 ZNF697Q5TEC3 545 aa12.64□□□□□ -0.39
PNN-203ENST00000554117 NSMFQ6X4W1 530 aa12.64□□□□□ -0.39
PNN-203ENST00000554117 CCDC144CPQ8IYA2 1237 aa12.64□□□□□ -0.39
PNN-203ENST00000554117 FAM227BQ96M60 508 aa12.64□□□□□ -0.39
PNN-203ENST00000554117 TTC14Q96N46 770 aa12.64□□□□□ -0.39
PNN-203ENST00000554117 TMEM39AQ9NV64 488 aa12.64□□□□□ -0.39
PNN-203ENST00000554117 CTNNA3Q9UI47 895 aa12.64□□□□□ -0.39
PNN-203ENST00000554117 PRR12Q9ULL5 1215 aa12.64□□□□□ -0.39
PNN-203ENST00000554117 A0A0D9SFI3 127 aa12.63□□□□□ -0.39
PNN-203ENST00000554117 ICAM1P05362 532 aa12.63□□□□□ -0.39
PNN-203ENST00000554117 HAND2P61296 217 aa12.63□□□□□ -0.39
PNN-203ENST00000554117 TNFAIP2Q03169 654 aa12.63□□□□□ -0.39
PNN-203ENST00000554117 MAPK8IP2Q13387 824 aaPredicted RBP12.63□□□□□ -0.39
PNN-203ENST00000554117 IMMTQ16891 758 aaKnown RBP12.63□□□□□ -0.39
PNN-203ENST00000554117 BRDTQ58F21 947 aaPredicted RBP12.63□□□□□ -0.39
PNN-203ENST00000554117 GNASQ5JWF2 1037 aa12.63□□□□□ -0.39
PNN-203ENST00000554117 VPS53Q5VIR6 699 aa12.63□□□□□ -0.39
PNN-203ENST00000554117 SMC5Q8IY18 1101 aa12.63□□□□□ -0.39
PNN-203ENST00000554117 SLC17A8Q8NDX2 589 aa12.63□□□□□ -0.39
PNN-203ENST00000554117 AGBL1Q96MI9 1066 aa12.63□□□□□ -0.39
PNN-203ENST00000554117 TCP11L1Q9NUJ3 509 aa12.63□□□□□ -0.39
PNN-203ENST00000554117 TANC1Q9C0D5 1861 aa12.63□□□□□ -0.39
PNN-203ENST00000554117 ELP1O95163 1332 aa12.62□□□□□ -0.39
PNN-203ENST00000554117 RAD50Q92878 1312 aa12.62□□□□□ -0.39
PNN-203ENST00000554117 LOC102724159A0A0B4J2E5 919 aa12.62□□□□□ -0.39
PNN-203ENST00000554117 A0A0U1RQG5 324 aaPredicted RBP12.62□□□□□ -0.39
PNN-203ENST00000554117 PTPDC1A2A3K4 754 aa12.62□□□□□ -0.39
PNN-203ENST00000554117 SOX1O00570 391 aaPredicted RBP12.62□□□□□ -0.39
PNN-203ENST00000554117 NMT2O60551 498 aa12.62□□□□□ -0.39
PNN-203ENST00000554117 CABYRO75952 493 aa12.62□□□□□ -0.39
PNN-203ENST00000554117 SNAI1O95863 264 aaPredicted RBP12.62□□□□□ -0.39
PNN-203ENST00000554117 TAL1P17542 331 aaPredicted RBP12.62□□□□□ -0.39
PNN-203ENST00000554117 SDSP20132 328 aa12.62□□□□□ -0.39
PNN-203ENST00000554117 TLE2Q04725 743 aa12.62□□□□□ -0.39
PNN-203ENST00000554117 PWP2Q15269 919 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms