RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 GLRX3O76003 335 aaKnown RBP8.25□□□□□ -1.09
PRPF40B-214ENST00000551320 IGHA2P01877 340 aa8.25□□□□□ -1.09
PRPF40B-214ENST00000551320 HOXC6P09630 235 aa8.25□□□□□ -1.09
PRPF40B-214ENST00000551320 ADD2P35612 726 aa8.25□□□□□ -1.09
PRPF40B-214ENST00000551320 SNAP25P60880 206 aa8.25□□□□□ -1.09
PRPF40B-214ENST00000551320 TLE2Q04725 743 aa8.25□□□□□ -1.09
PRPF40B-214ENST00000551320 ICA1Q05084 483 aa8.25□□□□□ -1.09
PRPF40B-214ENST00000551320 LRRC41Q15345 812 aa8.25□□□□□ -1.09
PRPF40B-214ENST00000551320 FAM109BQ6ICB4 259 aaPredicted RBP8.25□□□□□ -1.09
PRPF40B-214ENST00000551320 LAPTM4BQ86VI4 370 aa8.25□□□□□ -1.09
PRPF40B-214ENST00000551320 MYLIPQ8WY64 445 aa8.25□□□□□ -1.09
PRPF40B-214ENST00000551320 LPAR1Q92633 364 aa8.25□□□□□ -1.09
PRPF40B-214ENST00000551320 MAML3Q96JK9 1138 aa8.25□□□□□ -1.09
PRPF40B-214ENST00000551320 LBHD1Q9BQE6 289 aaPredicted RBP8.25□□□□□ -1.09
PRPF40B-214ENST00000551320 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.25□□□□□ -1.09
PRPF40B-214ENST00000551320 COL25A1Q9BXS0 654 aaPredicted RBP8.25□□□□□ -1.09
PRPF40B-214ENST00000551320 INCENPQ9NQS7 918 aa8.25□□□□□ -1.09
PRPF40B-214ENST00000551320 RIPK3Q9Y572 518 aa8.25□□□□□ -1.09
PRPF40B-214ENST00000551320 SLC4A4Q9Y6R1 1079 aa8.25□□□□□ -1.09
PRPF40B-214ENST00000551320 TTC28Q96AY4 2481 aa8.25□□□□□ -1.09
PRPF40B-214ENST00000551320 REV3LO60673 3130 aa8.24□□□□□ -1.09
PRPF40B-214ENST00000551320 DDX11L8A8MPP1 907 aa8.24□□□□□ -1.09
PRPF40B-214ENST00000551320 ADCY6O43306 1168 aa8.24□□□□□ -1.09
PRPF40B-214ENST00000551320 HRO43593 1189 aa8.24□□□□□ -1.09
PRPF40B-214ENST00000551320 PQBP1O60828 265 aaKnown RBP8.24□□□□□ -1.09
PRPF40B-214ENST00000551320 TMEM63BQ5T3F8 832 aa8.24□□□□□ -1.09
PRPF40B-214ENST00000551320 SWT1Q5T5J6 900 aaKnown RBP8.24□□□□□ -1.09
PRPF40B-214ENST00000551320 C12orf60Q5U649 245 aa8.24□□□□□ -1.09
PRPF40B-214ENST00000551320 CTR9Q6PD62 1173 aa8.24□□□□□ -1.09
PRPF40B-214ENST00000551320 TRMT44Q8IYL2 757 aaKnown RBP8.24□□□□□ -1.09
PRPF40B-214ENST00000551320 CPXCR1Q8N123 301 aa8.24□□□□□ -1.09
PRPF40B-214ENST00000551320 CLASRPQ8N2M8 674 aaKnown RBP8.24□□□□□ -1.09
PRPF40B-214ENST00000551320 OTUD7AQ8TE49 926 aaPredicted RBP8.24□□□□□ -1.09
PRPF40B-214ENST00000551320 PPP1R13LQ8WUF5 828 aa8.24□□□□□ -1.09
PRPF40B-214ENST00000551320 SEC62Q99442 399 aaKnown RBP8.24□□□□□ -1.09
PRPF40B-214ENST00000551320 CDX2Q99626 313 aaPredicted RBP8.24□□□□□ -1.09
PRPF40B-214ENST00000551320 KRTAP3-3Q9BYR6 98 aa8.24□□□□□ -1.09
PRPF40B-214ENST00000551320 KRTAP3-2Q9BYR7 98 aa8.24□□□□□ -1.09
PRPF40B-214ENST00000551320 TTYH1Q9H313 450 aaPredicted RBP8.24□□□□□ -1.09
PRPF40B-214ENST00000551320 PRDM6Q9NQX0 595 aa8.24□□□□□ -1.09
PRPF40B-214ENST00000551320 PDLIM7Q9NR12 457 aa8.24□□□□□ -1.09
PRPF40B-214ENST00000551320 GINM1Q9NU53 330 aa8.24□□□□□ -1.09
PRPF40B-214ENST00000551320 ZBTB40Q9NUA8 1239 aa8.24□□□□□ -1.09
PRPF40B-214ENST00000551320 STXBP5LQ9Y2K9 1186 aa8.24□□□□□ -1.09
PRPF40B-214ENST00000551320 COL11A1P12107 1806 aaPredicted RBP8.24□□□□□ -1.09
PRPF40B-214ENST00000551320 ZNFX1Q9P2E3 1918 aaKnown RBP8.23□□□□□ -1.09
PRPF40B-214ENST00000551320 GRXCR1A8MXD5 290 aa8.23□□□□□ -1.09
PRPF40B-214ENST00000551320 MINDY4BA8MYZ0 360 aa8.23□□□□□ -1.09
PRPF40B-214ENST00000551320 KBTBD13C9JR72 458 aa8.23□□□□□ -1.09
PRPF40B-214ENST00000551320 M0R2C6 588 aa8.23□□□□□ -1.09
PRPF40B-214ENST00000551320 DNM1LO00429 736 aa8.23□□□□□ -1.09
PRPF40B-214ENST00000551320 TTF1Q15361 905 aaPredicted RBP8.23□□□□□ -1.09
PRPF40B-214ENST00000551320 DIEXFQ68CQ4 756 aaKnown RBP8.23□□□□□ -1.09
PRPF40B-214ENST00000551320 POTEGQ6S5H5 508 aa8.23□□□□□ -1.09
PRPF40B-214ENST00000551320 TMEM179Q6ZVK1 233 aa8.23□□□□□ -1.09
PRPF40B-214ENST00000551320 ERC1Q8IUD2 1116 aa8.23□□□□□ -1.09
PRPF40B-214ENST00000551320 OSBP2Q969R2 916 aa8.23□□□□□ -1.09
PRPF40B-214ENST00000551320 KIF1BPQ96EK5 621 aa8.23□□□□□ -1.09
PRPF40B-214ENST00000551320 PURBQ96QR8 312 aaKnown RBP8.23□□□□□ -1.09
PRPF40B-214ENST00000551320 MMP19Q99542 508 aa8.23□□□□□ -1.09
PRPF40B-214ENST00000551320 VCPKMTQ9H867 229 aa8.23□□□□□ -1.09
PRPF40B-214ENST00000551320 HOMER2Q9NSB8 354 aa8.23□□□□□ -1.09
PRPF40B-214ENST00000551320 HOXC10Q9NYD6 342 aa8.23□□□□□ -1.09
PRPF40B-214ENST00000551320 MTMR7Q9Y216 660 aa8.23□□□□□ -1.09
PRPF40B-214ENST00000551320 TMX2Q9Y320 296 aa8.23□□□□□ -1.09
PRPF40B-214ENST00000551320 CHD7Q9P2D1 2997 aa8.22□□□□□ -1.09
PRPF40B-214ENST00000551320 LTBP2Q14767 1821 aa8.22□□□□□ -1.09
PRPF40B-214ENST00000551320 POTEMA6NI47 508 aa8.22□□□□□ -1.09
PRPF40B-214ENST00000551320 VWA5AO00534 786 aa8.22□□□□□ -1.09
PRPF40B-214ENST00000551320 SEPT4O43236 478 aa8.22□□□□□ -1.09
PRPF40B-214ENST00000551320 FCER1AP12319 257 aa8.22□□□□□ -1.09
PRPF40B-214ENST00000551320 CD46P15529 392 aa8.22□□□□□ -1.09
PRPF40B-214ENST00000551320 RASA1P20936 1047 aa8.22□□□□□ -1.09
PRPF40B-214ENST00000551320 OLFML2BQ68BL8 750 aa8.22□□□□□ -1.09
PRPF40B-214ENST00000551320 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.22□□□□□ -1.09
PRPF40B-214ENST00000551320 LRRC47Q8N1G4 583 aaKnown RBP8.22□□□□□ -1.09
PRPF40B-214ENST00000551320 USP38Q8NB14 1042 aa8.22□□□□□ -1.09
PRPF40B-214ENST00000551320 REPS2Q8NFH8 660 aa8.22□□□□□ -1.09
PRPF40B-214ENST00000551320 GTF3C2Q8WUA4 911 aaPredicted RBP8.22□□□□□ -1.09
PRPF40B-214ENST00000551320 PPM1EQ8WY54 764 aa8.22□□□□□ -1.09
PRPF40B-214ENST00000551320 KIFC2Q96AC6 838 aa8.22□□□□□ -1.09
PRPF40B-214ENST00000551320 ZFRQ96KR1 1074 aaKnown RBP8.22□□□□□ -1.09
PRPF40B-214ENST00000551320 HAUS7Q99871 368 aa8.22□□□□□ -1.09
PRPF40B-214ENST00000551320 SEMA6BQ9H3T3 888 aa8.22□□□□□ -1.09
PRPF40B-214ENST00000551320 ARHGEF10LQ9HCE6 1279 aa8.22□□□□□ -1.09
PRPF40B-214ENST00000551320 RAVER2Q9HCJ3 691 aaKnown RBP8.22□□□□□ -1.09
PRPF40B-214ENST00000551320 EPB41L4AQ9HCS5 686 aaPredicted RBP8.22□□□□□ -1.09
PRPF40B-214ENST00000551320 XPNPEP3Q9NQH7 507 aa8.22□□□□□ -1.09
PRPF40B-214ENST00000551320 PRKAG2Q9UGJ0 569 aa8.22□□□□□ -1.09
PRPF40B-214ENST00000551320 ISY1Q9ULR0 285 aaKnown RBP8.22□□□□□ -1.09
PRPF40B-214ENST00000551320 A0A0G2JMZ2 1700 aa8.21□□□□□ -1.09
PRPF40B-214ENST00000551320 A0A1W2PQ45 241 aaPredicted RBP8.21□□□□□ -1.1
PRPF40B-214ENST00000551320 A0A1W2PQY0 241 aa8.21□□□□□ -1.1
PRPF40B-214ENST00000551320 GSG1L2A8MUP6 293 aa8.21□□□□□ -1.1
PRPF40B-214ENST00000551320 SNAI1O95863 264 aaPredicted RBP8.21□□□□□ -1.1
PRPF40B-214ENST00000551320 NDUFB10O96000 172 aa8.21□□□□□ -1.1
PRPF40B-214ENST00000551320 ZNF865P0CJ78 1059 aaPredicted RBP8.21□□□□□ -1.1
PRPF40B-214ENST00000551320 ACRP10323 421 aa8.21□□□□□ -1.1
PRPF40B-214ENST00000551320 ATP5JP18859 108 aa8.21□□□□□ -1.1
PRPF40B-214ENST00000551320 STAT3P40763 770 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms