RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 MYO7AQ13402 2215 aa16.58■□□□□ 0.24
SNRPF-203ENST00000551316 HLA-DOAP06340 250 aa16.57■□□□□ 0.24
SNRPF-203ENST00000551316 IL15P40933 162 aaPredicted RBP16.57■□□□□ 0.24
SNRPF-203ENST00000551316 PPP4CP60510 307 aa16.57■□□□□ 0.24
SNRPF-203ENST00000551316 ITGA7Q13683 1181 aa16.57■□□□□ 0.24
SNRPF-203ENST00000551316 CERKLQ49MI3 558 aaPredicted RBP16.57■□□□□ 0.24
SNRPF-203ENST00000551316 ERMP1Q7Z2K6 904 aa16.57■□□□□ 0.24
SNRPF-203ENST00000551316 RPUSD2Q8IZ73 545 aaKnown RBP16.57■□□□□ 0.24
SNRPF-203ENST00000551316 MB21D1Q8N884 522 aa16.57■□□□□ 0.24
SNRPF-203ENST00000551316 PPP1R13LQ8WUF5 828 aa16.57■□□□□ 0.24
SNRPF-203ENST00000551316 ACVR2BQ13705 512 aa16.56■□□□□ 0.24
SNRPF-203ENST00000551316 KCTD2Q14681 263 aa16.56■□□□□ 0.24
SNRPF-203ENST00000551316 HERC4Q5GLZ8 1057 aaPredicted RBP16.56■□□□□ 0.24
SNRPF-203ENST00000551316 NAA16Q6N069 864 aaPredicted RBP16.56■□□□□ 0.24
SNRPF-203ENST00000551316 RIOX2Q8IUF8 465 aa16.56■□□□□ 0.24
SNRPF-203ENST00000551316 REPS2Q8NFH8 660 aa16.56■□□□□ 0.24
SNRPF-203ENST00000551316 TRMT13Q9NUP7 481 aaKnown RBP16.56■□□□□ 0.24
SNRPF-203ENST00000551316 LMCD1Q9NZU5 365 aa16.56■□□□□ 0.24
SNRPF-203ENST00000551316 ZNF214Q9UL59 606 aaPredicted RBP16.56■□□□□ 0.24
SNRPF-203ENST00000551316 DDX49Q9Y6V7 483 aaKnown RBP16.56■□□□□ 0.24
SNRPF-203ENST00000551316 ARID4AP29374 1257 aaPredicted RBP16.55■□□□□ 0.24
SNRPF-203ENST00000551316 TFCP2Q12800 502 aa16.55■□□□□ 0.24
SNRPF-203ENST00000551316 TMEM63BQ5T3F8 832 aa16.55■□□□□ 0.24
SNRPF-203ENST00000551316 MAMDC4Q6UXC1 1216 aa16.55■□□□□ 0.24
SNRPF-203ENST00000551316 SNRKQ9NRH2 765 aa16.55■□□□□ 0.24
SNRPF-203ENST00000551316 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.55■□□□□ 0.24
SNRPF-203ENST00000551316 SERPINB13Q9UIV8 391 aa16.55■□□□□ 0.24
SNRPF-203ENST00000551316 FBXO3Q9UK99 471 aa16.55■□□□□ 0.24
SNRPF-203ENST00000551316 TPRP12270 2363 aaKnown RBP16.54■□□□□ 0.24
SNRPF-203ENST00000551316 DNAJC25-GNG10A0A024R161 153 aa16.54■□□□□ 0.24
SNRPF-203ENST00000551316 SLC25A27O95847 323 aa16.54■□□□□ 0.24
SNRPF-203ENST00000551316 PLCD1P51178 756 aa16.54■□□□□ 0.24
SNRPF-203ENST00000551316 DEFB103AP81534 67 aa16.54■□□□□ 0.24
SNRPF-203ENST00000551316 TCTN1Q2MV58 587 aa16.54■□□□□ 0.24
SNRPF-203ENST00000551316 SIAH1Q8IUQ4 282 aa16.54■□□□□ 0.24
SNRPF-203ENST00000551316 ADHFE1Q8IWW8 467 aa16.54■□□□□ 0.24
SNRPF-203ENST00000551316 EHD4Q9H223 541 aa16.54■□□□□ 0.24
SNRPF-203ENST00000551316 LRP2BPQ9P2M1 347 aa16.54■□□□□ 0.24
SNRPF-203ENST00000551316 SCN10AQ9Y5Y9 1956 aa16.53■□□□□ 0.24
SNRPF-203ENST00000551316 TMEM221A6NGB7 291 aa16.53■□□□□ 0.24
SNRPF-203ENST00000551316 M0R296 226 aa16.53■□□□□ 0.24
SNRPF-203ENST00000551316 NKX3-2P78367 333 aa16.53■□□□□ 0.24
SNRPF-203ENST00000551316 MVPQ14764 893 aaKnown RBP16.53■□□□□ 0.24
SNRPF-203ENST00000551316 RNF135Q8IUD6 432 aa16.53■□□□□ 0.24
SNRPF-203ENST00000551316 NOL10Q9BSC4 688 aaKnown RBP16.53■□□□□ 0.24
SNRPF-203ENST00000551316 ADAMTS5Q9UNA0 930 aa16.53■□□□□ 0.24
SNRPF-203ENST00000551316 RIPK3Q9Y572 518 aa16.53■□□□□ 0.24
SNRPF-203ENST00000551316 PRR23AA6NEV1 266 aa16.52■□□□□ 0.24
SNRPF-203ENST00000551316 PFKMP08237 780 aa16.52■□□□□ 0.24
SNRPF-203ENST00000551316 BMP8AQ7Z5Y6 402 aa16.52■□□□□ 0.24
SNRPF-203ENST00000551316 PHOSPHO2Q8TCD6 241 aa16.52■□□□□ 0.24
SNRPF-203ENST00000551316 ALDH8A1Q9H2A2 487 aaPredicted RBP16.52■□□□□ 0.24
SNRPF-203ENST00000551316 ACACBO00763 2458 aa16.51■□□□□ 0.23
SNRPF-203ENST00000551316 MAP1BP46821 2468 aaKnown RBP16.51■□□□□ 0.23
SNRPF-203ENST00000551316 LINC01553A4QN01 128 aa16.51■□□□□ 0.23
SNRPF-203ENST00000551316 BAG3O95817 575 aa16.51■□□□□ 0.23
SNRPF-203ENST00000551316 PLCG2P16885 1265 aa16.51■□□□□ 0.23
SNRPF-203ENST00000551316 ID4P47928 161 aa16.51■□□□□ 0.23
SNRPF-203ENST00000551316 ERVK-21P61565 698 aa16.51■□□□□ 0.23
SNRPF-203ENST00000551316 CCDC184Q52MB2 194 aa16.51■□□□□ 0.23
SNRPF-203ENST00000551316 MIGA1Q8NAN2 632 aa16.51■□□□□ 0.23
SNRPF-203ENST00000551316 EDAQ92838 391 aa16.51■□□□□ 0.23
SNRPF-203ENST00000551316 PBXIP1Q96AQ6 731 aa16.51■□□□□ 0.23
SNRPF-203ENST00000551316 USP24Q9UPU5 2620 aa16.51■□□□□ 0.23
SNRPF-203ENST00000551316 BAZ2AQ9UIF9 1905 aaKnown RBP16.51■□□□□ 0.23
SNRPF-203ENST00000551316 H0Y858 1186 aa16.5■□□□□ 0.23
SNRPF-203ENST00000551316 WDR5P61964 334 aaKnown RBP16.5■□□□□ 0.23
SNRPF-203ENST00000551316 GABPAQ06546 454 aa16.5■□□□□ 0.23
SNRPF-203ENST00000551316 CLUL1Q15846 466 aa16.5■□□□□ 0.23
SNRPF-203ENST00000551316 ATF7IPQ6VMQ6 1270 aa16.5■□□□□ 0.23
SNRPF-203ENST00000551316 TRIM67Q6ZTA4 783 aa16.5■□□□□ 0.23
SNRPF-203ENST00000551316 ARMCX2Q7L311 632 aa16.5■□□□□ 0.23
SNRPF-203ENST00000551316 MSL3Q8N5Y2 521 aaKnown RBP16.5■□□□□ 0.23
SNRPF-203ENST00000551316 ATOH1Q92858 354 aaPredicted RBP16.5■□□□□ 0.23
SNRPF-203ENST00000551316 NEUROD6Q96NK8 337 aa16.5■□□□□ 0.23
SNRPF-203ENST00000551316 C17orf80Q9BSJ5 609 aa16.5■□□□□ 0.23
SNRPF-203ENST00000551316 SPC25Q9HBM1 224 aa16.5■□□□□ 0.23
SNRPF-203ENST00000551316 CABP5Q9NP86 173 aa16.5■□□□□ 0.23
SNRPF-203ENST00000551316 COPRSQ9NQ92 184 aa16.5■□□□□ 0.23
SNRPF-203ENST00000551316 TLR9Q9NR96 1032 aa16.5■□□□□ 0.23
SNRPF-203ENST00000551316 PRKAG3Q9UGI9 489 aa16.5■□□□□ 0.23
SNRPF-203ENST00000551316 GNEQ9Y223 722 aaKnown RBP16.5■□□□□ 0.23
SNRPF-203ENST00000551316 SALL2Q9Y467 1007 aaPredicted RBP16.5■□□□□ 0.23
SNRPF-203ENST00000551316 MICAL3Q7RTP6 2002 aa16.5■□□□□ 0.23
SNRPF-203ENST00000551316 GREB1LQ9C091 1923 aaPredicted RBP16.49■□□□□ 0.23
SNRPF-203ENST00000551316 VWA5AO00534 786 aa16.49■□□□□ 0.23
SNRPF-203ENST00000551316 LTBRP36941 435 aa16.49■□□□□ 0.23
SNRPF-203ENST00000551316 STAT3P40763 770 aa16.49■□□□□ 0.23
SNRPF-203ENST00000551316 GPNMBQ14956 572 aa16.49■□□□□ 0.23
SNRPF-203ENST00000551316 COL19A1Q14993 1142 aa16.49■□□□□ 0.23
SNRPF-203ENST00000551316 TLK2Q86UE8 772 aa16.49■□□□□ 0.23
SNRPF-203ENST00000551316 MRPL50Q8N5N7 158 aaKnown RBP16.49■□□□□ 0.23
SNRPF-203ENST00000551316 PIH1D3Q9NQM4 214 aaKnown RBP16.49■□□□□ 0.23
SNRPF-203ENST00000551316 TNKSO95271 1327 aa16.48■□□□□ 0.23
SNRPF-203ENST00000551316 PROB1E7EW31 1015 aa16.48■□□□□ 0.23
SNRPF-203ENST00000551316 MPHOSPH10O00566 681 aaKnown RBP16.48■□□□□ 0.23
SNRPF-203ENST00000551316 CYP2E1P05181 493 aaPredicted RBP16.48■□□□□ 0.23
SNRPF-203ENST00000551316 ACTN1P12814 892 aa16.48■□□□□ 0.23
SNRPF-203ENST00000551316 DLX2Q07687 328 aaPredicted RBP16.48■□□□□ 0.23
SNRPF-203ENST00000551316 FSCN1Q16658 493 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms