RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 TRAF1Q13077 416 aa24.9■■□□□ 1.58
NEK3-202ENST00000550841 CPXCR1Q8N123 301 aa24.9■■□□□ 1.58
NEK3-202ENST00000550841 SHCBP1Q8NEM2 672 aa24.9■■□□□ 1.58
NEK3-202ENST00000550841 SPZ1Q9BXG8 430 aa24.9■■□□□ 1.58
NEK3-202ENST00000550841 JMJD4Q9H9V9 463 aa24.9■■□□□ 1.58
NEK3-202ENST00000550841 FCGRTP55899 365 aa24.89■■□□□ 1.58
NEK3-202ENST00000550841 SOX10P56693 466 aa24.89■■□□□ 1.58
NEK3-202ENST00000550841 TKFCQ3LXA3 575 aa24.89■■□□□ 1.58
NEK3-202ENST00000550841 TMTC3Q6ZXV5 915 aa24.89■■□□□ 1.58
NEK3-202ENST00000550841 RIOX2Q8IUF8 465 aa24.89■■□□□ 1.58
NEK3-202ENST00000550841 SLKQ9H2G2 1235 aaPredicted RBP24.89■■□□□ 1.58
NEK3-202ENST00000550841 CPVLQ9H3G5 476 aa24.89■■□□□ 1.58
NEK3-202ENST00000550841 MROH8Q9H579 483 aa24.89■■□□□ 1.58
NEK3-202ENST00000550841 CWC22Q9HCG8 908 aaKnown RBP24.89■■□□□ 1.58
NEK3-202ENST00000550841 RAVER2Q9HCJ3 691 aaKnown RBP24.89■■□□□ 1.58
NEK3-202ENST00000550841 ZNF214Q9UL59 606 aaPredicted RBP24.89■■□□□ 1.58
NEK3-202ENST00000550841 LIMCH1Q9UPQ0 1083 aa24.89■■□□□ 1.58
NEK3-202ENST00000550841 HPS5Q9UPZ3 1129 aa24.89■■□□□ 1.58
NEK3-202ENST00000550841 NID2Q14112 1375 aa24.89■■□□□ 1.57
NEK3-202ENST00000550841 GNRH1P01148 92 aa24.88■■□□□ 1.57
NEK3-202ENST00000550841 ICAM1P05362 532 aa24.88■■□□□ 1.57
NEK3-202ENST00000550841 SNRNP48Q6IEG0 339 aaKnown RBP24.88■■□□□ 1.57
NEK3-202ENST00000550841 CCDC174Q6PII3 467 aa24.88■■□□□ 1.57
NEK3-202ENST00000550841 CPLX2Q6PUV4 134 aaKnown RBP24.88■■□□□ 1.57
NEK3-202ENST00000550841 SRBD1Q8N5C6 995 aaKnown RBP24.88■■□□□ 1.57
NEK3-202ENST00000550841 ZSCAN31Q96LW9 406 aaPredicted RBP24.88■■□□□ 1.57
NEK3-202ENST00000550841 LARP6Q9BRS8 491 aaKnown RBP24.88■■□□□ 1.57
NEK3-202ENST00000550841 MOV10L1Q9BXT6 1211 aaKnown RBP24.88■■□□□ 1.57
NEK3-202ENST00000550841 TPCN1Q9ULQ1 816 aa24.88■■□□□ 1.57
NEK3-202ENST00000550841 FMNL1O95466 1100 aaPredicted RBP24.87■■□□□ 1.57
NEK3-202ENST00000550841 HOXD10P28358 340 aa24.87■■□□□ 1.57
NEK3-202ENST00000550841 PSMC4P43686 418 aa24.87■■□□□ 1.57
NEK3-202ENST00000550841 MCM2P49736 904 aa24.87■■□□□ 1.57
NEK3-202ENST00000550841 CCT2P78371 535 aaKnown RBP24.87■■□□□ 1.57
NEK3-202ENST00000550841 CDC37Q16543 378 aaPredicted RBP24.87■■□□□ 1.57
NEK3-202ENST00000550841 MTMR8Q96EF0 704 aa24.87■■□□□ 1.57
NEK3-202ENST00000550841 RRP36Q96EU6 259 aaKnown RBP24.87■■□□□ 1.57
NEK3-202ENST00000550841 FAM217BQ9NTX9 383 aaPredicted RBP24.87■■□□□ 1.57
NEK3-202ENST00000550841 PNMA6FA0A0J9YX94 578 aa24.86■■□□□ 1.57
NEK3-202ENST00000550841 ZBTB5O15062 677 aa24.86■■□□□ 1.57
NEK3-202ENST00000550841 PEX10O60683 326 aa24.86■■□□□ 1.57
NEK3-202ENST00000550841 PFKFB2O60825 505 aa24.86■■□□□ 1.57
NEK3-202ENST00000550841 PLEKHA8P1O95397 391 aa24.86■■□□□ 1.57
NEK3-202ENST00000550841 CDC27P30260 824 aa24.86■■□□□ 1.57
NEK3-202ENST00000550841 ADD1P35611 737 aaKnown RBP24.86■■□□□ 1.57
NEK3-202ENST00000550841 SNAP25P60880 206 aa24.86■■□□□ 1.57
NEK3-202ENST00000550841 NBPF11Q86T75 865 aa24.86■■□□□ 1.57
NEK3-202ENST00000550841 NCAPG2Q86XI2 1143 aa24.86■■□□□ 1.57
NEK3-202ENST00000550841 CHST13Q8NET6 341 aa24.86■■□□□ 1.57
NEK3-202ENST00000550841 CD99L2Q8TCZ2 262 aa24.86■■□□□ 1.57
NEK3-202ENST00000550841 COA7Q96BR5 231 aa24.86■■□□□ 1.57
NEK3-202ENST00000550841 SEC63Q9UGP8 760 aaKnown RBP24.86■■□□□ 1.57
NEK3-202ENST00000550841 FBXO40Q9UH90 709 aa24.86■■□□□ 1.57
NEK3-202ENST00000550841 CCPG1Q9ULG6 757 aa24.86■■□□□ 1.57
NEK3-202ENST00000550841 A0A0G2JMZ2 1700 aa24.86■■□□□ 1.57
NEK3-202ENST00000550841 ZNF536O15090 1300 aa24.86■■□□□ 1.57
NEK3-202ENST00000550841 COL11A1P12107 1806 aaPredicted RBP24.85■■□□□ 1.57
NEK3-202ENST00000550841 CPLX1O14810 134 aa24.85■■□□□ 1.57
NEK3-202ENST00000550841 CYTH3O43739 400 aa24.85■■□□□ 1.57
NEK3-202ENST00000550841 STRNO43815 780 aa24.85■■□□□ 1.57
NEK3-202ENST00000550841 ERCC3P19447 782 aa24.85■■□□□ 1.57
NEK3-202ENST00000550841 SLC4A3P48751 1232 aa24.85■■□□□ 1.57
NEK3-202ENST00000550841 STK3Q13188 491 aa24.85■■□□□ 1.57
NEK3-202ENST00000550841 QRICH1Q2TAL8 776 aa24.85■■□□□ 1.57
NEK3-202ENST00000550841 FBXO11Q86XK2 927 aa24.85■■□□□ 1.57
NEK3-202ENST00000550841 AGBL1Q96MI9 1066 aa24.85■■□□□ 1.57
NEK3-202ENST00000550841 IVNS1ABPQ9Y6Y0 642 aa24.85■■□□□ 1.57
NEK3-202ENST00000550841 TNPO2O14787 897 aaKnown RBP24.84■■□□□ 1.57
NEK3-202ENST00000550841 WDR78Q5VTH9 848 aa24.84■■□□□ 1.57
NEK3-202ENST00000550841 NOL8Q76FK4 1167 aaKnown RBP24.84■■□□□ 1.57
NEK3-202ENST00000550841 PLEKHH3Q7Z736 793 aa24.84■■□□□ 1.57
NEK3-202ENST00000550841 CCDC82Q8N4S0 544 aa24.84■■□□□ 1.57
NEK3-202ENST00000550841 PIGSQ96S52 555 aa24.84■■□□□ 1.57
NEK3-202ENST00000550841 AMNQ9BXJ7 453 aa24.84■■□□□ 1.57
NEK3-202ENST00000550841 PORCNQ9H237 461 aa24.84■■□□□ 1.57
NEK3-202ENST00000550841 EFCC1Q9HA90 598 aa24.84■■□□□ 1.57
NEK3-202ENST00000550841 RBM27Q9P2N5 1060 aaKnown RBP24.84■■□□□ 1.57
NEK3-202ENST00000550841 CDKL5O76039 1030 aa24.83■■□□□ 1.57
NEK3-202ENST00000550841 ALAS1P13196 640 aa24.83■■□□□ 1.57
NEK3-202ENST00000550841 AKAP17AQ02040 695 aaKnown RBP24.83■■□□□ 1.57
NEK3-202ENST00000550841 HOMER1Q86YM7 354 aa24.83■■□□□ 1.57
NEK3-202ENST00000550841 CMTR1Q8N1G2 835 aaKnown RBP24.83■■□□□ 1.57
NEK3-202ENST00000550841 SH2B1Q9NRF2 756 aaPredicted RBP24.83■■□□□ 1.57
NEK3-202ENST00000550841 BAZ2BQ9UIF8 2168 aaKnown RBP24.83■■□□□ 1.56
NEK3-202ENST00000550841 IFNAR1P17181 557 aa24.82■■□□□ 1.56
NEK3-202ENST00000550841 PRMT2P55345 433 aa24.82■■□□□ 1.56
NEK3-202ENST00000550841 ME3Q16798 604 aa24.82■■□□□ 1.56
NEK3-202ENST00000550841 SLC35G1Q2M3R5 365 aa24.82■■□□□ 1.56
NEK3-202ENST00000550841 GPR142Q7Z601 462 aa24.82■■□□□ 1.56
NEK3-202ENST00000550841 TRIM47Q96LD4 638 aa24.82■■□□□ 1.56
NEK3-202ENST00000550841 TRERF1Q96PN7 1200 aa24.82■■□□□ 1.56
NEK3-202ENST00000550841 V9GY48 417 aaPredicted RBP24.82■■□□□ 1.56
NEK3-202ENST00000550841 ABCB11O95342 1321 aa24.82■■□□□ 1.56
NEK3-202ENST00000550841 FCER1AP12319 257 aa24.81■■□□□ 1.56
NEK3-202ENST00000550841 FUT2Q10981 343 aa24.81■■□□□ 1.56
NEK3-202ENST00000550841 SCRN1Q12765 414 aa24.81■■□□□ 1.56
NEK3-202ENST00000550841 TRIM22Q8IYM9 498 aa24.81■■□□□ 1.56
NEK3-202ENST00000550841 ABRAQ8N0Z2 381 aa24.81■■□□□ 1.56
NEK3-202ENST00000550841 ARHGAP39Q9C0H5 1083 aa24.81■■□□□ 1.56
NEK3-202ENST00000550841 MAF1Q9H063 256 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms