RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 DIS3Q9Y2L1 958 aaKnown RBP20.22■□□□□ 0.83
CHMP1A-208ENST00000550102 RBM8AQ9Y5S9 174 aaKnown RBP20.22■□□□□ 0.83
CHMP1A-208ENST00000550102 LRRC37A2A6NM11 1700 aa20.22■□□□□ 0.83
CHMP1A-208ENST00000550102 CYBAP13498 195 aa20.21■□□□□ 0.83
CHMP1A-208ENST00000550102 TKFCQ3LXA3 575 aa20.21■□□□□ 0.83
CHMP1A-208ENST00000550102 GPATCH4Q5T3I0 446 aaKnown RBP20.21■□□□□ 0.83
CHMP1A-208ENST00000550102 TTBK2Q6IQ55 1244 aa20.21■□□□□ 0.83
CHMP1A-208ENST00000550102 CCDC174Q6PII3 467 aa20.21■□□□□ 0.83
CHMP1A-208ENST00000550102 CASC1Q6TDU7 716 aa20.21■□□□□ 0.83
CHMP1A-208ENST00000550102 ANKS1AQ92625 1134 aa20.21■□□□□ 0.83
CHMP1A-208ENST00000550102 DDX11Q96FC9 970 aa20.21■□□□□ 0.83
CHMP1A-208ENST00000550102 ACAD9Q9H845 621 aa20.21■□□□□ 0.83
CHMP1A-208ENST00000550102 ZNF536O15090 1300 aa20.21■□□□□ 0.83
CHMP1A-208ENST00000550102 MSCO60682 206 aa20.2■□□□□ 0.82
CHMP1A-208ENST00000550102 SLC16A2P36021 539 aa20.2■□□□□ 0.82
CHMP1A-208ENST00000550102 ZNF792Q3KQV3 632 aa20.2■□□□□ 0.82
CHMP1A-208ENST00000550102 AGBL1Q96MI9 1066 aa20.2■□□□□ 0.82
CHMP1A-208ENST00000550102 LSG1Q9H089 658 aaKnown RBP20.2■□□□□ 0.82
CHMP1A-208ENST00000550102 RANBP17Q9H2T7 1088 aaKnown RBP20.2■□□□□ 0.82
CHMP1A-208ENST00000550102 RNF146Q9NTX7 359 aa20.2■□□□□ 0.82
CHMP1A-208ENST00000550102 OGDHLQ9ULD0 1010 aa20.2■□□□□ 0.82
CHMP1A-208ENST00000550102 DNAJC25-GNG10A0A024R161 153 aa20.19■□□□□ 0.82
CHMP1A-208ENST00000550102 E7EWF7 191 aa20.19■□□□□ 0.82
CHMP1A-208ENST00000550102 CDC45O75419 566 aa20.19■□□□□ 0.82
CHMP1A-208ENST00000550102 ICAM1P05362 532 aa20.19■□□□□ 0.82
CHMP1A-208ENST00000550102 CNGA1P29973 690 aa20.19■□□□□ 0.82
CHMP1A-208ENST00000550102 SNAP25P60880 206 aa20.19■□□□□ 0.82
CHMP1A-208ENST00000550102 IFIT1BQ5T764 474 aaKnown RBP20.19■□□□□ 0.82
CHMP1A-208ENST00000550102 CYB5R4Q7L1T6 521 aa20.19■□□□□ 0.82
CHMP1A-208ENST00000550102 ANKRD35Q8N283 1001 aa20.19■□□□□ 0.82
CHMP1A-208ENST00000550102 NCOA7Q8NI08 942 aa20.19■□□□□ 0.82
CHMP1A-208ENST00000550102 HTATIP2Q9BUP3 242 aa20.19■□□□□ 0.82
CHMP1A-208ENST00000550102 ANO2Q9NQ90 1003 aa20.19■□□□□ 0.82
CHMP1A-208ENST00000550102 CCPG1Q9ULG6 757 aa20.19■□□□□ 0.82
CHMP1A-208ENST00000550102 TAF6LQ9Y6J9 622 aa20.19■□□□□ 0.82
CHMP1A-208ENST00000550102 ALAS1P13196 640 aa20.18■□□□□ 0.82
CHMP1A-208ENST00000550102 SART3Q15020 963 aaKnown RBP20.18■□□□□ 0.82
CHMP1A-208ENST00000550102 ASPRV1Q53RT3 343 aa20.18■□□□□ 0.82
CHMP1A-208ENST00000550102 TRPV1Q8NER1 839 aa20.18■□□□□ 0.82
CHMP1A-208ENST00000550102 DDX20Q9UHI6 824 aaKnown RBP20.18■□□□□ 0.82
CHMP1A-208ENST00000550102 NRBP1Q9UHY1 535 aa20.18■□□□□ 0.82
CHMP1A-208ENST00000550102 PFASO15067 1338 aa20.18■□□□□ 0.82
CHMP1A-208ENST00000550102 SEC23AQ15436 765 aa20.17■□□□□ 0.82
CHMP1A-208ENST00000550102 LHX8Q68G74 356 aa20.17■□□□□ 0.82
CHMP1A-208ENST00000550102 STOX1Q6ZVD7 989 aa20.17■□□□□ 0.82
CHMP1A-208ENST00000550102 NECAB2Q7Z6G3 386 aa20.17■□□□□ 0.82
CHMP1A-208ENST00000550102 MSL3Q8N5Y2 521 aaKnown RBP20.17■□□□□ 0.82
CHMP1A-208ENST00000550102 DIS3LQ8TF46 1054 aaKnown RBP20.17■□□□□ 0.82
CHMP1A-208ENST00000550102 TRERF1Q96PN7 1200 aa20.17■□□□□ 0.82
CHMP1A-208ENST00000550102 TINF2Q9BSI4 451 aa20.17■□□□□ 0.82
CHMP1A-208ENST00000550102 PNMA2Q9UL42 364 aa20.17■□□□□ 0.82
CHMP1A-208ENST00000550102 ERICH2A1L162 156 aa20.16■□□□□ 0.82
CHMP1A-208ENST00000550102 ERICH6BQ5W0A0 696 aa20.16■□□□□ 0.82
CHMP1A-208ENST00000550102 ZNF467Q7Z7K2 595 aaPredicted RBP20.16■□□□□ 0.82
CHMP1A-208ENST00000550102 PAWRQ96IZ0 340 aaKnown RBP20.16■□□□□ 0.82
CHMP1A-208ENST00000550102 A1CFQ9NQ94 594 aaKnown RBP20.16■□□□□ 0.82
CHMP1A-208ENST00000550102 SYNGAP1Q96PV0 1343 aa20.16■□□□□ 0.82
CHMP1A-208ENST00000550102 IFIT3O14879 490 aaKnown RBP20.15■□□□□ 0.82
CHMP1A-208ENST00000550102 SEPT4O43236 478 aa20.15■□□□□ 0.82
CHMP1A-208ENST00000550102 PARP1P09874 1014 aaKnown RBP20.15■□□□□ 0.82
CHMP1A-208ENST00000550102 GOLGA8HP0CJ92 632 aa20.15■□□□□ 0.82
CHMP1A-208ENST00000550102 CNPY2Q9Y2B0 182 aa20.15■□□□□ 0.82
CHMP1A-208ENST00000550102 WDR19Q8NEZ3 1342 aa20.15■□□□□ 0.82
CHMP1A-208ENST00000550102 POTEB2H3BUK9 544 aa20.14■□□□□ 0.81
CHMP1A-208ENST00000550102 MUM1L1Q5H9M0 696 aa20.14■□□□□ 0.81
CHMP1A-208ENST00000550102 MB21D2Q8IYB1 491 aaPredicted RBP20.14■□□□□ 0.81
CHMP1A-208ENST00000550102 PPP4R2Q9NY27 417 aa20.14■□□□□ 0.81
CHMP1A-208ENST00000550102 SLC27A2O14975 620 aa20.13■□□□□ 0.81
CHMP1A-208ENST00000550102 TAL1P17542 331 aaPredicted RBP20.13■□□□□ 0.81
CHMP1A-208ENST00000550102 MNX1P50219 401 aaPredicted RBP20.13■□□□□ 0.81
CHMP1A-208ENST00000550102 WTAPQ15007 396 aa20.13■□□□□ 0.81
CHMP1A-208ENST00000550102 PRAMEF19Q5SWL8 479 aa20.13■□□□□ 0.81
CHMP1A-208ENST00000550102 CREB3L3Q68CJ9 461 aa20.13■□□□□ 0.81
CHMP1A-208ENST00000550102 MAMDC4Q6UXC1 1216 aa20.13■□□□□ 0.81
CHMP1A-208ENST00000550102 FAM133AQ8N9E0 248 aa20.13■□□□□ 0.81
CHMP1A-208ENST00000550102 FGD4Q96M96 766 aa20.13■□□□□ 0.81
CHMP1A-208ENST00000550102 C11orf49Q9H6J7 331 aa20.13■□□□□ 0.81
CHMP1A-208ENST00000550102 ANTXR2P58335 489 aa20.12■□□□□ 0.81
CHMP1A-208ENST00000550102 TMEM67Q5HYA8 995 aa20.12■□□□□ 0.81
CHMP1A-208ENST00000550102 RNF20Q5VTR2 975 aa20.12■□□□□ 0.81
CHMP1A-208ENST00000550102 NSMFQ6X4W1 530 aa20.12■□□□□ 0.81
CHMP1A-208ENST00000550102 DPF3Q92784 378 aa20.12■□□□□ 0.81
CHMP1A-208ENST00000550102 UBA5Q9GZZ9 404 aa20.12■□□□□ 0.81
CHMP1A-208ENST00000550102 CPVLQ9H3G5 476 aa20.12■□□□□ 0.81
CHMP1A-208ENST00000550102 CYP39A1Q9NYL5 469 aa20.12■□□□□ 0.81
CHMP1A-208ENST00000550102 DHX16O60231 1041 aaKnown RBP20.11■□□□□ 0.81
CHMP1A-208ENST00000550102 CNTN2Q02246 1040 aa20.11■□□□□ 0.81
CHMP1A-208ENST00000550102 NECTIN1Q15223 517 aa20.11■□□□□ 0.81
CHMP1A-208ENST00000550102 CDC37Q16543 378 aaPredicted RBP20.11■□□□□ 0.81
CHMP1A-208ENST00000550102 CHST3Q7LGC8 479 aa20.11■□□□□ 0.81
CHMP1A-208ENST00000550102 BAZ2BQ9UIF8 2168 aaKnown RBP20.11■□□□□ 0.81
CHMP1A-208ENST00000550102 DNM1LO00429 736 aa20.1■□□□□ 0.81
CHMP1A-208ENST00000550102 NFIBO00712 420 aa20.1■□□□□ 0.81
CHMP1A-208ENST00000550102 PRC1O43663 620 aa20.1■□□□□ 0.81
CHMP1A-208ENST00000550102 AKR1A1P14550 325 aa20.1■□□□□ 0.81
CHMP1A-208ENST00000550102 MCM5P33992 734 aa20.1■□□□□ 0.81
CHMP1A-208ENST00000550102 ANO1Q5XXA6 986 aa20.1■□□□□ 0.81
CHMP1A-208ENST00000550102 ARMCX2Q7L311 632 aa20.1■□□□□ 0.81
CHMP1A-208ENST00000550102 ADGRF4Q8IZF3 695 aa20.1■□□□□ 0.81
CHMP1A-208ENST00000550102 MTA3Q9BTC8 594 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms