RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 CTDP1Q9Y5B0 961 aaPredicted RBP15.82■□□□□ 0.12
SCARB1-209ENST00000545305 SMCO2A6NFE2 343 aa15.81■□□□□ 0.12
SCARB1-209ENST00000545305 FLOT1O75955 427 aa15.81■□□□□ 0.12
SCARB1-209ENST00000545305 CELF2O95319 508 aaKnown RBP15.81■□□□□ 0.12
SCARB1-209ENST00000545305 NR5A1Q13285 461 aa15.81■□□□□ 0.12
SCARB1-209ENST00000545305 SH3D19Q5HYK7 790 aa15.81■□□□□ 0.12
SCARB1-209ENST00000545305 TYW1BQ6NUM6 668 aa15.81■□□□□ 0.12
SCARB1-209ENST00000545305 PRPF38AQ8NAV1 312 aaKnown RBP15.81■□□□□ 0.12
SCARB1-209ENST00000545305 OXER1Q8TDS5 423 aa15.81■□□□□ 0.12
SCARB1-209ENST00000545305 ZMYND12Q9H0C1 365 aa15.81■□□□□ 0.12
SCARB1-209ENST00000545305 GLT8D2Q9H1C3 349 aa15.81■□□□□ 0.12
SCARB1-209ENST00000545305 NOL7Q9UMY1 257 aaKnown RBP15.81■□□□□ 0.12
SCARB1-209ENST00000545305 PCDHA1Q9Y5I3 950 aa15.81■□□□□ 0.12
SCARB1-209ENST00000545305 CXCL11O14625 94 aa15.8■□□□□ 0.12
SCARB1-209ENST00000545305 PPP1R11O60927 126 aaPredicted RBP15.8■□□□□ 0.12
SCARB1-209ENST00000545305 FDX1P10109 184 aa15.8■□□□□ 0.12
SCARB1-209ENST00000545305 SNAP25P60880 206 aa15.8■□□□□ 0.12
SCARB1-209ENST00000545305 FMR1Q06787 632 aaKnown RBP eCLIP15.8■□□□□ 0.12
SCARB1-209ENST00000545305 DGKZQ13574 1117 aa15.8■□□□□ 0.12
SCARB1-209ENST00000545305 NPY5RQ15761 445 aa15.8■□□□□ 0.12
SCARB1-209ENST00000545305 CNKSR2Q8WXI2 1034 aa15.8■□□□□ 0.12
SCARB1-209ENST00000545305 OPTNQ96CV9 577 aa15.8■□□□□ 0.12
SCARB1-209ENST00000545305 SLC10A4Q96EP9 437 aa15.8■□□□□ 0.12
SCARB1-209ENST00000545305 SPATA32Q96LK8 384 aa15.8■□□□□ 0.12
SCARB1-209ENST00000545305 RANBP17Q9H2T7 1088 aaKnown RBP15.8■□□□□ 0.12
SCARB1-209ENST00000545305 FBXO28Q9NVF7 368 aa15.8■□□□□ 0.12
SCARB1-209ENST00000545305 TFIP11Q9UBB9 837 aaKnown RBP15.8■□□□□ 0.12
SCARB1-209ENST00000545305 PPP1R9AQ9ULJ8 1098 aa15.8■□□□□ 0.12
SCARB1-209ENST00000545305 CCDC194A0A1B0GVG4 234 aa15.79■□□□□ 0.12
SCARB1-209ENST00000545305 USP17L15C9J2P7 530 aa15.79■□□□□ 0.12
SCARB1-209ENST00000545305 USP17L13C9JLJ4 530 aa15.79■□□□□ 0.12
SCARB1-209ENST00000545305 USP17L11C9JVI0 530 aa15.79■□□□□ 0.12
SCARB1-209ENST00000545305 USP17L18D6R9N7 530 aa15.79■□□□□ 0.12
SCARB1-209ENST00000545305 USP17L22D6RA61 530 aa15.79■□□□□ 0.12
SCARB1-209ENST00000545305 USP17L17D6RBQ6 530 aa15.79■□□□□ 0.12
SCARB1-209ENST00000545305 USP17L19D6RCP7 530 aa15.79■□□□□ 0.12
SCARB1-209ENST00000545305 USP17L20D6RJB6 530 aa15.79■□□□□ 0.12
SCARB1-209ENST00000545305 USP17L24Q0WX57 530 aa15.79■□□□□ 0.12
SCARB1-209ENST00000545305 NBR1Q14596 966 aa15.79■□□□□ 0.12
SCARB1-209ENST00000545305 USH1GQ495M9 461 aa15.79■□□□□ 0.12
SCARB1-209ENST00000545305 RILPL1Q5EBL4 403 aa15.79■□□□□ 0.12
SCARB1-209ENST00000545305 CCDC174Q6PII3 467 aa15.79■□□□□ 0.12
SCARB1-209ENST00000545305 GADL1Q6ZQY3 521 aa15.79■□□□□ 0.12
SCARB1-209ENST00000545305 REXO1Q8N1G1 1221 aaKnown RBP15.79■□□□□ 0.12
SCARB1-209ENST00000545305 TMEM87AQ8NBN3 555 aa15.79■□□□□ 0.12
SCARB1-209ENST00000545305 PROCA1Q8NCQ7 364 aaPredicted RBP15.79■□□□□ 0.12
SCARB1-209ENST00000545305 CUL5Q93034 780 aa15.79■□□□□ 0.12
SCARB1-209ENST00000545305 GDPD2Q9HCC8 539 aa15.79■□□□□ 0.12
SCARB1-209ENST00000545305 PNMA2Q9UL42 364 aa15.79■□□□□ 0.12
SCARB1-209ENST00000545305 KCNH4Q9UQ05 1017 aa15.79■□□□□ 0.12
SCARB1-209ENST00000545305 LOC285556D6RIA3 1793 aa15.79■□□□□ 0.12
SCARB1-209ENST00000545305 PTPRFP10586 1907 aa15.78■□□□□ 0.12
SCARB1-209ENST00000545305 TRPM7Q96QT4 1865 aa15.78■□□□□ 0.12
SCARB1-209ENST00000545305 A0A0G2JLL6 359 aaPredicted RBP15.78■□□□□ 0.12
SCARB1-209ENST00000545305 IRF6O14896 467 aa15.78■□□□□ 0.12
SCARB1-209ENST00000545305 ZBED4O75132 1171 aa15.78■□□□□ 0.12
SCARB1-209ENST00000545305 PRPF40AO75400 957 aaKnown RBP15.78■□□□□ 0.12
SCARB1-209ENST00000545305 MRPL12P52815 198 aaKnown RBP15.78■□□□□ 0.12
SCARB1-209ENST00000545305 KRT25Q7Z3Z0 450 aa15.78■□□□□ 0.12
SCARB1-209ENST00000545305 PRRT2Q7Z6L0 340 aaPredicted RBP15.78■□□□□ 0.12
SCARB1-209ENST00000545305 TNFRSF25Q93038 417 aa15.78■□□□□ 0.12
SCARB1-209ENST00000545305 USP28Q96RU2 1077 aa15.78■□□□□ 0.12
SCARB1-209ENST00000545305 RIC8AQ9NPQ8 531 aa15.78■□□□□ 0.12
SCARB1-209ENST00000545305 POLR3EQ9NVU0 708 aa15.78■□□□□ 0.12
SCARB1-209ENST00000545305 TCHHQ07283 1943 aa15.78■□□□□ 0.12
SCARB1-209ENST00000545305 ELP1O95163 1332 aa15.77■□□□□ 0.12
SCARB1-209ENST00000545305 ABCB11O95342 1321 aa15.77■□□□□ 0.12
SCARB1-209ENST00000545305 MYPNQ86TC9 1320 aa15.77■□□□□ 0.12
SCARB1-209ENST00000545305 YEATS4O95619 227 aa15.77■□□□□ 0.12
SCARB1-209ENST00000545305 CEBPZQ03701 1054 aaKnown RBP15.77■□□□□ 0.12
SCARB1-209ENST00000545305 SNAPC2Q13487 334 aa15.77■□□□□ 0.12
SCARB1-209ENST00000545305 STK38Q15208 465 aa15.77■□□□□ 0.12
SCARB1-209ENST00000545305 ANO1Q5XXA6 986 aa15.77■□□□□ 0.12
SCARB1-209ENST00000545305 PIK3AP1Q6ZUJ8 805 aa15.77■□□□□ 0.12
SCARB1-209ENST00000545305 LEO1Q8WVC0 666 aaPredicted RBP15.77■□□□□ 0.12
SCARB1-209ENST00000545305 PSTPIP2Q9H939 334 aa15.77■□□□□ 0.12
SCARB1-209ENST00000545305 RTEL1Q9NZ71 1219 aa15.77■□□□□ 0.12
SCARB1-209ENST00000545305 PCDHA6Q9UN73 950 aa15.77■□□□□ 0.12
SCARB1-209ENST00000545305 CEP131Q9UPN4 1083 aa15.77■□□□□ 0.12
SCARB1-209ENST00000545305 PCDHA8Q9Y5H6 950 aa15.77■□□□□ 0.12
SCARB1-209ENST00000545305 PARP14Q460N5 1801 aa15.76■□□□□ 0.11
SCARB1-209ENST00000545305 ITGBL1O95965 494 aaPredicted RBP15.76■□□□□ 0.11
SCARB1-209ENST00000545305 ICAM1P05362 532 aa15.76■□□□□ 0.11
SCARB1-209ENST00000545305 TRAPPC10P48553 1259 aa15.76■□□□□ 0.11
SCARB1-209ENST00000545305 NASPP49321 788 aaPredicted RBP15.76■□□□□ 0.11
SCARB1-209ENST00000545305 PABPC4Q13310 644 aaKnown RBP eCLIP15.76■□□□□ 0.116e-20■□□□□ 9.8
SCARB1-209ENST00000545305 COG2Q14746 738 aa15.76■□□□□ 0.11
SCARB1-209ENST00000545305 NONOQ15233 471 aaKnown RBP eCLIP15.76■□□□□ 0.111e-6■□□□□ 8.8
SCARB1-209ENST00000545305 SF3A1Q15459 793 aaKnown RBP15.76■□□□□ 0.11
SCARB1-209ENST00000545305 SKOR2Q2VWA4 1001 aaPredicted RBP15.76■□□□□ 0.11
SCARB1-209ENST00000545305 MCTP2Q6DN12 878 aa15.76■□□□□ 0.11
SCARB1-209ENST00000545305 CATSPERGQ6ZRH7 1159 aa15.76■□□□□ 0.11
SCARB1-209ENST00000545305 FASTKD5Q7L8L6 764 aaKnown RBP15.76■□□□□ 0.11
SCARB1-209ENST00000545305 TEX2Q8IWB9 1127 aa15.76■□□□□ 0.11
SCARB1-209ENST00000545305 RASGRP4Q8TDF6 673 aa15.76■□□□□ 0.11
SCARB1-209ENST00000545305 SLC38A10Q9HBR0 1119 aa15.76■□□□□ 0.11
SCARB1-209ENST00000545305 LMBRD1Q9NUN5 540 aa15.76■□□□□ 0.11
SCARB1-209ENST00000545305 CCPG1Q9ULG6 757 aa15.76■□□□□ 0.11
SCARB1-209ENST00000545305 MRPL11Q9Y3B7 192 aaKnown RBP15.76■□□□□ 0.11
SCARB1-209ENST00000545305 GOLGA6L4A6NEF3 574 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms