RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 TCTN2Q96GX1 697 aa9.1□□□□□ -0.95
LEMD3-206ENST00000545026 C1orf159Q96HA4 380 aa9.1□□□□□ -0.95
LEMD3-206ENST00000545026 CLUHP3Q96NS8 147 aa9.1□□□□□ -0.95
LEMD3-206ENST00000545026 MRPL4Q9BYD3 311 aaKnown RBP9.1□□□□□ -0.95
LEMD3-206ENST00000545026 GPATCH2Q9NW75 528 aa9.1□□□□□ -0.95
LEMD3-206ENST00000545026 PLAGL2Q9UPG8 496 aa9.1□□□□□ -0.95
LEMD3-206ENST00000545026 GSC2O15499 205 aa9.09□□□□□ -0.95
LEMD3-206ENST00000545026 SNRPB2P08579 225 aaKnown RBP9.09□□□□□ -0.95
LEMD3-206ENST00000545026 POU4F1Q01851 419 aa9.09□□□□□ -0.95
LEMD3-206ENST00000545026 CPSF6Q16630 551 aaKnown RBP eCLIP9.09□□□□□ -0.95
LEMD3-206ENST00000545026 TM4SF20Q53R12 229 aa9.09□□□□□ -0.95
LEMD3-206ENST00000545026 CDKAL1Q5VV42 579 aa9.09□□□□□ -0.95
LEMD3-206ENST00000545026 ANKRD13AQ8IZ07 590 aa9.09□□□□□ -0.95
LEMD3-206ENST00000545026 TMEM151AQ8N4L1 468 aa9.09□□□□□ -0.95
LEMD3-206ENST00000545026 TMEM145Q8NBT3 493 aa9.09□□□□□ -0.95
LEMD3-206ENST00000545026 KCTD13Q8WZ19 329 aa9.09□□□□□ -0.95
LEMD3-206ENST00000545026 BRINP2Q9C0B6 783 aa9.09□□□□□ -0.95
LEMD3-206ENST00000545026 TRIT1Q9H3H1 467 aaKnown RBP9.09□□□□□ -0.95
LEMD3-206ENST00000545026 WASH4PA8MWX3 477 aa9.08□□□□□ -0.96
LEMD3-206ENST00000545026 CEACAM5P06731 702 aa9.08□□□□□ -0.96
LEMD3-206ENST00000545026 NTRK3Q16288 839 aa9.08□□□□□ -0.96
LEMD3-206ENST00000545026 TRIM61Q5EBN2 209 aa9.08□□□□□ -0.96
LEMD3-206ENST00000545026 NKAPLQ5M9Q1 402 aa9.08□□□□□ -0.96
LEMD3-206ENST00000545026 SLC35F1Q5T1Q4 408 aa9.08□□□□□ -0.96
LEMD3-206ENST00000545026 CWF19L1Q69YN2 538 aaKnown RBP9.08□□□□□ -0.96
LEMD3-206ENST00000545026 TSPYL5Q86VY4 417 aaPredicted RBP9.08□□□□□ -0.96
LEMD3-206ENST00000545026 DHX37Q8IY37 1157 aaKnown RBP9.08□□□□□ -0.96
LEMD3-206ENST00000545026 NIM1KQ8IY84 436 aa9.08□□□□□ -0.96
LEMD3-206ENST00000545026 MFSD3Q96ES6 412 aa9.08□□□□□ -0.96
LEMD3-206ENST00000545026 HSPA12BQ96MM6 686 aa9.08□□□□□ -0.96
LEMD3-206ENST00000545026 AURKAO14965 403 aa9.07□□□□□ -0.96
LEMD3-206ENST00000545026 KCNQ2O43526 872 aa9.07□□□□□ -0.96
LEMD3-206ENST00000545026 CPP00450 1065 aa9.07□□□□□ -0.96
LEMD3-206ENST00000545026 VIL1P09327 827 aaKnown RBP9.07□□□□□ -0.96
LEMD3-206ENST00000545026 BMP8BP34820 402 aa9.07□□□□□ -0.96
LEMD3-206ENST00000545026 ECI1P42126 302 aa9.07□□□□□ -0.96
LEMD3-206ENST00000545026 KCNJ6P48051 423 aa9.07□□□□□ -0.96
LEMD3-206ENST00000545026 PRSS53Q2L4Q9 553 aa9.07□□□□□ -0.96
LEMD3-206ENST00000545026 GAB4Q2WGN9 574 aa9.07□□□□□ -0.96
LEMD3-206ENST00000545026 DENND5AQ6IQ26 1287 aa9.07□□□□□ -0.96
LEMD3-206ENST00000545026 ARHGAP27Q6ZUM4 889 aa9.07□□□□□ -0.96
LEMD3-206ENST00000545026 KREMEN2Q8NCW0 462 aa9.07□□□□□ -0.96
LEMD3-206ENST00000545026 COPS5Q92905 334 aa9.07□□□□□ -0.96
LEMD3-206ENST00000545026 FCRL3Q96P31 734 aaPredicted RBP9.07□□□□□ -0.96
LEMD3-206ENST00000545026 LRRC4CQ9HCJ2 640 aa9.07□□□□□ -0.96
LEMD3-206ENST00000545026 COL4A3BPQ9Y5P4 624 aa9.07□□□□□ -0.96
LEMD3-206ENST00000545026 BLACEA4D250 179 aa9.06□□□□□ -0.96
LEMD3-206ENST00000545026 STXBP3O00186 592 aa9.06□□□□□ -0.96
LEMD3-206ENST00000545026 CD3EP07766 207 aa9.06□□□□□ -0.96
LEMD3-206ENST00000545026 VAV1P15498 845 aa9.06□□□□□ -0.96
LEMD3-206ENST00000545026 CLCN7P51798 805 aa9.06□□□□□ -0.96
LEMD3-206ENST00000545026 SCRN1Q12765 414 aa9.06□□□□□ -0.96
LEMD3-206ENST00000545026 ZDHHC13Q8IUH4 622 aa9.06□□□□□ -0.96
LEMD3-206ENST00000545026 USHBP1Q8N6Y0 703 aa9.06□□□□□ -0.96
LEMD3-206ENST00000545026 SLC7A14Q8TBB6 771 aa9.06□□□□□ -0.96
LEMD3-206ENST00000545026 ZCRB1Q8TBF4 217 aaKnown RBP9.06□□□□□ -0.96
LEMD3-206ENST00000545026 SLC12A9Q9BXP2 914 aa9.06□□□□□ -0.96
LEMD3-206ENST00000545026 PCDH12Q9NPG4 1184 aa9.06□□□□□ -0.96
LEMD3-206ENST00000545026 SEMA3GQ9NS98 782 aa9.06□□□□□ -0.96
LEMD3-206ENST00000545026 ZSWIM5Q9P217 1185 aa9.06□□□□□ -0.96
LEMD3-206ENST00000545026 H3BS24 57 aa9.05□□□□□ -0.96
LEMD3-206ENST00000545026 IRS4O14654 1257 aaPredicted RBP9.05□□□□□ -0.96
LEMD3-206ENST00000545026 PROCP04070 461 aa9.05□□□□□ -0.96
LEMD3-206ENST00000545026 IFNGR1P15260 489 aa9.05□□□□□ -0.96
LEMD3-206ENST00000545026 TPP2P29144 1249 aaPredicted RBP9.05□□□□□ -0.96
LEMD3-206ENST00000545026 NOP2P46087 812 aaKnown RBP9.05□□□□□ -0.96
LEMD3-206ENST00000545026 GABREP78334 506 aa9.05□□□□□ -0.96
LEMD3-206ENST00000545026 RSPO4Q2I0M5 234 aaPredicted RBP9.05□□□□□ -0.96
LEMD3-206ENST00000545026 THAP5Q7Z6K1 395 aa9.05□□□□□ -0.96
LEMD3-206ENST00000545026 LINC00116Q8NCU8 138 aa9.05□□□□□ -0.96
LEMD3-206ENST00000545026 GSTCDQ8NEC7 633 aa9.05□□□□□ -0.96
LEMD3-206ENST00000545026 TRIM39Q9HCM9 518 aa9.05□□□□□ -0.96
LEMD3-206ENST00000545026 SFMBT1Q9UHJ3 866 aa9.05□□□□□ -0.96
LEMD3-206ENST00000545026 BACE2Q9Y5Z0 518 aa9.05□□□□□ -0.96
LEMD3-206ENST00000545026 A0A087X0B3 334 aa9.04□□□□□ -0.96
LEMD3-206ENST00000545026 C2orf71A6NGG8 1288 aa9.04□□□□□ -0.96
LEMD3-206ENST00000545026 ZNF205O95201 554 aa9.04□□□□□ -0.96
LEMD3-206ENST00000545026 THBDP07204 575 aa9.04□□□□□ -0.96
LEMD3-206ENST00000545026 SDSP20132 328 aa9.04□□□□□ -0.96
LEMD3-206ENST00000545026 RTP2Q5QGT7 225 aa9.04□□□□□ -0.96
LEMD3-206ENST00000545026 SLC51AQ86UW1 340 aa9.04□□□□□ -0.96
LEMD3-206ENST00000545026 PLD6Q8N2A8 252 aaKnown RBP9.04□□□□□ -0.96
LEMD3-206ENST00000545026 NPLOC4Q8TAT6 608 aa9.04□□□□□ -0.96
LEMD3-206ENST00000545026 NETO1Q8TDF5 533 aa9.04□□□□□ -0.96
LEMD3-206ENST00000545026 FRS2Q8WU20 508 aa9.04□□□□□ -0.96
LEMD3-206ENST00000545026 PTPRN2Q92932 1015 aa9.04□□□□□ -0.96
LEMD3-206ENST00000545026 UBE2FQ969M7 185 aa9.04□□□□□ -0.96
LEMD3-206ENST00000545026 SLC52A2Q9HAB3 445 aa9.04□□□□□ -0.96
LEMD3-206ENST00000545026 NOP58Q9Y2X3 529 aaKnown RBP9.04□□□□□ -0.96
LEMD3-206ENST00000545026 PRR19A6NJB7 356 aa9.03□□□□□ -0.96
LEMD3-206ENST00000545026 CYP26A1O43174 497 aa9.03□□□□□ -0.96
LEMD3-206ENST00000545026 SYPP08247 313 aa9.03□□□□□ -0.96
LEMD3-206ENST00000545026 MYCLP1P12525 358 aaPredicted RBP9.03□□□□□ -0.96
LEMD3-206ENST00000545026 IBSPP21815 317 aaPredicted RBP9.03□□□□□ -0.96
LEMD3-206ENST00000545026 IFI16Q16666 785 aaKnown RBP9.03□□□□□ -0.96
LEMD3-206ENST00000545026 KRT26Q7Z3Y9 468 aa9.03□□□□□ -0.96
LEMD3-206ENST00000545026 THNSL2Q86YJ6 484 aa9.03□□□□□ -0.96
LEMD3-206ENST00000545026 GPRC5CQ9NQ84 441 aa9.03□□□□□ -0.96
LEMD3-206ENST00000545026 PIM2Q9P1W9 311 aa9.03□□□□□ -0.96
LEMD3-206ENST00000545026 NDOR1Q9UHB4 597 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms