RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 RGS22Q8NE09 1264 aa18.35■□□□□ 0.53
XRCC1-202ENST00000543982 ATG4CQ96DT6 458 aa18.35■□□□□ 0.53
XRCC1-202ENST00000543982 SLF1Q9BQI6 1058 aa18.35■□□□□ 0.53
XRCC1-202ENST00000543982 ATP6V1DQ9Y5K8 247 aa18.35■□□□□ 0.53
XRCC1-202ENST00000543982 ZNF536O15090 1300 aa18.34■□□□□ 0.53
XRCC1-202ENST00000543982 SMCO2A6NFE2 343 aa18.34■□□□□ 0.53
XRCC1-202ENST00000543982 OPLAHO14841 1288 aa18.34■□□□□ 0.53
XRCC1-202ENST00000543982 USH1GQ495M9 461 aa18.34■□□□□ 0.53
XRCC1-202ENST00000543982 FAM160B2Q86V87 743 aa18.34■□□□□ 0.53
XRCC1-202ENST00000543982 RBM46Q8TBY0 533 aaKnown RBP18.34■□□□□ 0.53
XRCC1-202ENST00000543982 ZMYND12Q9H0C1 365 aa18.34■□□□□ 0.53
XRCC1-202ENST00000543982 ZSCAN16Q9H4T2 348 aaPredicted RBP18.34■□□□□ 0.53
XRCC1-202ENST00000543982 TMOD4Q9NZQ9 345 aa18.34■□□□□ 0.53
XRCC1-202ENST00000543982 PPP1R9AQ9ULJ8 1098 aa18.34■□□□□ 0.53
XRCC1-202ENST00000543982 PCDHA1Q9Y5I3 950 aa18.34■□□□□ 0.53
XRCC1-202ENST00000543982 CXCL11O14625 94 aa18.33■□□□□ 0.53
XRCC1-202ENST00000543982 TOB1P50616 345 aaPredicted RBP18.33■□□□□ 0.53
XRCC1-202ENST00000543982 FKBP1BP68106 108 aa18.33■□□□□ 0.53
XRCC1-202ENST00000543982 GADL1Q6ZQY3 521 aa18.33■□□□□ 0.53
XRCC1-202ENST00000543982 PRPF38AQ8NAV1 312 aaKnown RBP18.33■□□□□ 0.53
XRCC1-202ENST00000543982 AGBL1Q96MI9 1066 aa18.33■□□□□ 0.53
XRCC1-202ENST00000543982 TMEM260Q9NX78 707 aa18.33■□□□□ 0.53
XRCC1-202ENST00000543982 XBP1P17861 261 aa18.33■□□□□ 0.52
XRCC1-202ENST00000543982 KRT2P35908 639 aa18.33■□□□□ 0.52
XRCC1-202ENST00000543982 GPAT2Q6NUI2 795 aa18.33■□□□□ 0.52
XRCC1-202ENST00000543982 FBXO11Q86XK2 927 aa18.33■□□□□ 0.52
XRCC1-202ENST00000543982 NOSTRINQ8IVI9 506 aa18.33■□□□□ 0.52
XRCC1-202ENST00000543982 BLIDQ8IZY5 108 aa18.33■□□□□ 0.52
XRCC1-202ENST00000543982 MS4A4AQ96JQ5 239 aa18.33■□□□□ 0.52
XRCC1-202ENST00000543982 USP28Q96RU2 1077 aa18.33■□□□□ 0.52
XRCC1-202ENST00000543982 P2RX7Q99572 595 aaKnown RBP18.33■□□□□ 0.52
XRCC1-202ENST00000543982 FOXP1Q9H334 677 aaPredicted RBP18.33■□□□□ 0.52
XRCC1-202ENST00000543982 PCDHA6Q9UN73 950 aa18.33■□□□□ 0.52
XRCC1-202ENST00000543982 PCDHA4Q9UN74 947 aa18.33■□□□□ 0.52
XRCC1-202ENST00000543982 PCDHA8Q9Y5H6 950 aa18.33■□□□□ 0.52
XRCC1-202ENST00000543982 CEBPZQ03701 1054 aaKnown RBP18.32■□□□□ 0.52
XRCC1-202ENST00000543982 UBE2SQ16763 222 aa18.32■□□□□ 0.52
XRCC1-202ENST00000543982 MYSM1Q5VVJ2 828 aa18.32■□□□□ 0.52
XRCC1-202ENST00000543982 TBC1D5Q92609 795 aa18.32■□□□□ 0.52
XRCC1-202ENST00000543982 MYH6P13533 1939 aa18.32■□□□□ 0.52
XRCC1-202ENST00000543982 VWA5AO00534 786 aa18.31■□□□□ 0.52
XRCC1-202ENST00000543982 DSG3P32926 999 aa18.31■□□□□ 0.52
XRCC1-202ENST00000543982 HUNKP57058 714 aa18.31■□□□□ 0.52
XRCC1-202ENST00000543982 REPS2Q8NFH8 660 aa18.31■□□□□ 0.52
XRCC1-202ENST00000543982 AMNQ9BXJ7 453 aa18.31■□□□□ 0.52
XRCC1-202ENST00000543982 SLC38A10Q9HBR0 1119 aa18.31■□□□□ 0.52
XRCC1-202ENST00000543982 RAVER2Q9HCJ3 691 aaKnown RBP18.31■□□□□ 0.52
XRCC1-202ENST00000543982 CLIC4Q9Y696 253 aa18.31■□□□□ 0.52
XRCC1-202ENST00000543982 TRAK2O60296 914 aa18.31■□□□□ 0.52
XRCC1-202ENST00000543982 SAFBQ15424 915 aaKnown RBP eCLIP18.31■□□□□ 0.52
XRCC1-202ENST00000543982 CPXCR1Q8N123 301 aa18.31■□□□□ 0.52
XRCC1-202ENST00000543982 DAGLBQ8NCG7 672 aa18.31■□□□□ 0.52
XRCC1-202ENST00000543982 PGBD1Q96JS3 809 aa18.31■□□□□ 0.52
XRCC1-202ENST00000543982 BIN2Q9UBW5 565 aaPredicted RBP18.31■□□□□ 0.52
XRCC1-202ENST00000543982 ADAMTS5Q9UNA0 930 aa18.31■□□□□ 0.52
XRCC1-202ENST00000543982 SMCHD1A6NHR9 2005 aa18.3■□□□□ 0.52
XRCC1-202ENST00000543982 USP17L15C9J2P7 530 aa18.3■□□□□ 0.52
XRCC1-202ENST00000543982 USP17L13C9JLJ4 530 aa18.3■□□□□ 0.52
XRCC1-202ENST00000543982 USP17L11C9JVI0 530 aa18.3■□□□□ 0.52
XRCC1-202ENST00000543982 USP17L18D6R9N7 530 aa18.3■□□□□ 0.52
XRCC1-202ENST00000543982 USP17L22D6RA61 530 aa18.3■□□□□ 0.52
XRCC1-202ENST00000543982 USP17L17D6RBQ6 530 aa18.3■□□□□ 0.52
XRCC1-202ENST00000543982 USP17L19D6RCP7 530 aa18.3■□□□□ 0.52
XRCC1-202ENST00000543982 USP17L20D6RJB6 530 aa18.3■□□□□ 0.52
XRCC1-202ENST00000543982 EDIL3O43854 480 aa18.3■□□□□ 0.52
XRCC1-202ENST00000543982 NCLP19338 710 aaKnown RBP18.3■□□□□ 0.52
XRCC1-202ENST00000543982 USP17L24Q0WX57 530 aa18.3■□□□□ 0.52
XRCC1-202ENST00000543982 COG2Q14746 738 aa18.3■□□□□ 0.52
XRCC1-202ENST00000543982 SKOR2Q2VWA4 1001 aaPredicted RBP18.3■□□□□ 0.52
XRCC1-202ENST00000543982 SPRYD7Q5W111 196 aa18.3■□□□□ 0.52
XRCC1-202ENST00000543982 USP17L6PQ6QN14 398 aa18.3■□□□□ 0.52
XRCC1-202ENST00000543982 BRAPQ7Z569 592 aa18.3■□□□□ 0.52
XRCC1-202ENST00000543982 SAPCD2Q86UD0 394 aa18.3■□□□□ 0.52
XRCC1-202ENST00000543982 ZNF784Q8NCA9 323 aaPredicted RBP18.3■□□□□ 0.52
XRCC1-202ENST00000543982 ESYT2A0FGR8 921 aa18.3■□□□□ 0.52
XRCC1-202ENST00000543982 UNCXA6NJT0 531 aa18.3■□□□□ 0.52
XRCC1-202ENST00000543982 SPDYE16A6NNV3 312 aaPredicted RBP18.3■□□□□ 0.52
XRCC1-202ENST00000543982 FIBPO43427 364 aa18.3■□□□□ 0.52
XRCC1-202ENST00000543982 GNL2Q13823 731 aaKnown RBP18.3■□□□□ 0.52
XRCC1-202ENST00000543982 JAKMIP3Q5VZ66 844 aa18.3■□□□□ 0.52
XRCC1-202ENST00000543982 PIK3AP1Q6ZUJ8 805 aa18.3■□□□□ 0.52
XRCC1-202ENST00000543982 LMBRD1Q9NUN5 540 aa18.3■□□□□ 0.52
XRCC1-202ENST00000543982 RIPK3Q9Y572 518 aa18.3■□□□□ 0.52
XRCC1-202ENST00000543982 GADD45BO75293 160 aaPredicted RBP18.29■□□□□ 0.52
XRCC1-202ENST00000543982 ATP2B1P20020 1258 aa18.29■□□□□ 0.52
XRCC1-202ENST00000543982 CALML3P27482 149 aa18.29■□□□□ 0.52
XRCC1-202ENST00000543982 TMEM132BQ14DG7 1078 aa18.29■□□□□ 0.52
XRCC1-202ENST00000543982 PROCA1Q8NCQ7 364 aaPredicted RBP18.29■□□□□ 0.52
XRCC1-202ENST00000543982 CCDC148Q8NFR7 591 aa18.29■□□□□ 0.52
XRCC1-202ENST00000543982 BRI3BPQ8WY22 251 aa18.29■□□□□ 0.52
XRCC1-202ENST00000543982 PSTPIP2Q9H939 334 aa18.29■□□□□ 0.52
XRCC1-202ENST00000543982 RIC8AQ9NPQ8 531 aa18.29■□□□□ 0.52
XRCC1-202ENST00000543982 RLFQ13129 1914 aa18.29■□□□□ 0.52
XRCC1-202ENST00000543982 hCG_1984214I3L0E3 225 aa18.28■□□□□ 0.52
XRCC1-202ENST00000543982 MEIS2O14770 477 aa18.28■□□□□ 0.52
XRCC1-202ENST00000543982 PRPF40AO75400 957 aaKnown RBP18.28■□□□□ 0.52
XRCC1-202ENST00000543982 YY1P25490 414 aa18.28■□□□□ 0.52
XRCC1-202ENST00000543982 HOXA7P31268 230 aaPredicted RBP18.28■□□□□ 0.52
XRCC1-202ENST00000543982 ADCY7P51828 1080 aa18.28■□□□□ 0.52
XRCC1-202ENST00000543982 SNAPC2Q13487 334 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms