RNA–Protein interactions for RNA: ENST00000543042.5

CLPB-212, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-212ENST00000543042 NYAP2Q9P242 653 aa20.42■□□□□ 0.86
CLPB-212ENST00000543042 PNMA6FA0A0J9YX94 578 aa20.42■□□□□ 0.86
CLPB-212ENST00000543042 ATP1A3P13637 1013 aa20.42■□□□□ 0.86
CLPB-212ENST00000543042 LMOD1P29536 600 aaPredicted RBP20.42■□□□□ 0.86
CLPB-212ENST00000543042 SLC1A4P43007 532 aa20.42■□□□□ 0.86
CLPB-212ENST00000543042 R3HDM1Q15032 1099 aaKnown RBP20.42■□□□□ 0.86
CLPB-212ENST00000543042 NONOQ15233 471 aaKnown RBP eCLIP20.42■□□□□ 0.86
CLPB-212ENST00000543042 DALRD3Q5D0E6 543 aaKnown RBP20.42■□□□□ 0.86
CLPB-212ENST00000543042 SMARCE1Q969G3 411 aa20.42■□□□□ 0.86
CLPB-212ENST00000543042 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.42■□□□□ 0.86
CLPB-212ENST00000543042 A0A1W2PRG0 241 aa20.41■□□□□ 0.86
CLPB-212ENST00000543042 EDIL3O43854 480 aa20.41■□□□□ 0.86
CLPB-212ENST00000543042 TGFB2P61812 414 aa20.41■□□□□ 0.86
CLPB-212ENST00000543042 E2F4Q16254 413 aa20.41■□□□□ 0.86
CLPB-212ENST00000543042 UBE2SQ16763 222 aa20.41■□□□□ 0.86
CLPB-212ENST00000543042 GPATCH4Q5T3I0 446 aaKnown RBP20.41■□□□□ 0.86
CLPB-212ENST00000543042 NT5DC1Q5TFE4 455 aa20.41■□□□□ 0.86
CLPB-212ENST00000543042 ARL6IP4Q66PJ3 421 aaKnown RBP20.41■□□□□ 0.86
CLPB-212ENST00000543042 TMEM179Q6ZVK1 233 aa20.41■□□□□ 0.86
CLPB-212ENST00000543042 KRT25Q7Z3Z0 450 aa20.41■□□□□ 0.86
CLPB-212ENST00000543042 REXO1Q8N1G1 1221 aaKnown RBP20.41■□□□□ 0.86
CLPB-212ENST00000543042 MTRQ99707 1265 aa20.41■□□□□ 0.86
CLPB-212ENST00000543042 TMEM39BQ9GZU3 492 aa20.41■□□□□ 0.86
CLPB-212ENST00000543042 HOOK1Q9UJC3 728 aaKnown RBP20.41■□□□□ 0.86
CLPB-212ENST00000543042 CNTNAP1P78357 1384 aa20.41■□□□□ 0.86
CLPB-212ENST00000543042 F5H6K3 240 aa20.41■□□□□ 0.86
CLPB-212ENST00000543042 KLRC3Q07444 240 aa20.41■□□□□ 0.86
CLPB-212ENST00000543042 KARSQ15046 597 aaKnown RBP20.41■□□□□ 0.86
CLPB-212ENST00000543042 NBPF9Q3BBW0 867 aa20.41■□□□□ 0.86
CLPB-212ENST00000543042 SH3RF1Q7Z6J0 888 aa20.41■□□□□ 0.86
CLPB-212ENST00000543042 PLIN2Q99541 437 aa20.41■□□□□ 0.86
CLPB-212ENST00000543042 BLZF1Q9H2G9 400 aa20.41■□□□□ 0.86
CLPB-212ENST00000543042 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.41■□□□□ 0.86
CLPB-212ENST00000543042 HDAC9Q9UKV0 1011 aa20.41■□□□□ 0.86
CLPB-212ENST00000543042 ZNF500O60304 480 aaPredicted RBP20.4■□□□□ 0.86
CLPB-212ENST00000543042 MORC3Q14149 939 aa20.4■□□□□ 0.86
CLPB-212ENST00000543042 DTHD1Q6ZMT9 781 aa20.4■□□□□ 0.86
CLPB-212ENST00000543042 MIGA2Q7L4E1 593 aa20.4■□□□□ 0.86
CLPB-212ENST00000543042 SPATA20Q8TB22 786 aa20.4■□□□□ 0.86
CLPB-212ENST00000543042 TMOD2Q9NZR1 351 aa20.4■□□□□ 0.86
CLPB-212ENST00000543042 ZBTB5O15062 677 aa20.39■□□□□ 0.86
CLPB-212ENST00000543042 ADCY7P51828 1080 aa20.39■□□□□ 0.86
CLPB-212ENST00000543042 LRMPQ12912 555 aa20.39■□□□□ 0.86
CLPB-212ENST00000543042 ARID5BQ14865 1188 aa20.39■□□□□ 0.86
CLPB-212ENST00000543042 HSP90AA4PQ58FG1 418 aa20.39■□□□□ 0.86
CLPB-212ENST00000543042 RBM26Q5T8P6 1007 aaKnown RBP20.39■□□□□ 0.86
CLPB-212ENST00000543042 KANK3Q6NY19 840 aa20.39■□□□□ 0.86
CLPB-212ENST00000543042 SPICE1Q8N0Z3 855 aa20.39■□□□□ 0.86
CLPB-212ENST00000543042 PSME4Q14997 1843 aa20.39■□□□□ 0.85
CLPB-212ENST00000543042 ESYT2A0FGR8 921 aa20.39■□□□□ 0.85
CLPB-212ENST00000543042 TAL1P17542 331 aaPredicted RBP20.39■□□□□ 0.85
CLPB-212ENST00000543042 POLD1P28340 1107 aa20.39■□□□□ 0.85
CLPB-212ENST00000543042 ECE1P42892 770 aa20.39■□□□□ 0.85
CLPB-212ENST00000543042 FMR1Q06787 632 aaKnown RBP eCLIP20.39■□□□□ 0.85
CLPB-212ENST00000543042 SPDYE2Q495Y8 402 aa20.39■□□□□ 0.85
CLPB-212ENST00000543042 NEK8Q86SG6 692 aa20.39■□□□□ 0.85
CLPB-212ENST00000543042 MED15Q96RN5 788 aa20.39■□□□□ 0.85
CLPB-212ENST00000543042 MTFR1LQ9H019 292 aa20.39■□□□□ 0.85
CLPB-212ENST00000543042 PYCARDQ9ULZ3 195 aa20.39■□□□□ 0.85
CLPB-212ENST00000543042 NFKBIEO00221 500 aa20.38■□□□□ 0.85
CLPB-212ENST00000543042 NDUFB10O96000 172 aa20.38■□□□□ 0.85
CLPB-212ENST00000543042 EGFRP00533 1210 aa20.38■□□□□ 0.85
CLPB-212ENST00000543042 LONP1P36776 959 aaKnown RBP20.38■□□□□ 0.85
CLPB-212ENST00000543042 QRICH1Q2TAL8 776 aa20.38■□□□□ 0.85
CLPB-212ENST00000543042 PDXDC2PQ6P474 469 aa20.38■□□□□ 0.85
CLPB-212ENST00000543042 FAM151AQ8WW52 585 aa20.38■□□□□ 0.85
CLPB-212ENST00000543042 MTMR8Q96EF0 704 aa20.38■□□□□ 0.85
CLPB-212ENST00000543042 MRFAP1L1Q96HT8 127 aa20.38■□□□□ 0.85
CLPB-212ENST00000543042 TAOK3Q9H2K8 898 aa20.38■□□□□ 0.85
CLPB-212ENST00000543042 IFNKQ9P0W0 207 aa20.38■□□□□ 0.85
CLPB-212ENST00000543042 KIF13BQ9NQT8 1826 aa20.38■□□□□ 0.85
CLPB-212ENST00000543042 DPYDQ12882 1025 aa20.38■□□□□ 0.85
CLPB-212ENST00000543042 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.38■□□□□ 0.85
CLPB-212ENST00000543042 TRMT44Q8IYL2 757 aaKnown RBP20.38■□□□□ 0.85
CLPB-212ENST00000543042 SMYD4Q8IYR2 804 aaPredicted RBP20.38■□□□□ 0.85
CLPB-212ENST00000543042 FAM177A1Q8N128 213 aaPredicted RBP20.38■□□□□ 0.85
CLPB-212ENST00000543042 XPO4Q9C0E2 1151 aaKnown RBP20.38■□□□□ 0.85
CLPB-212ENST00000543042 FANCLQ9NW38 375 aa20.38■□□□□ 0.85
CLPB-212ENST00000543042 BCS1LQ9Y276 419 aa20.38■□□□□ 0.85
CLPB-212ENST00000543042 SMTNL1A8MU46 457 aa20.37■□□□□ 0.85
CLPB-212ENST00000543042 IKBKBO14920 756 aa20.37■□□□□ 0.85
CLPB-212ENST00000543042 KIAA1755Q5JYT7 1200 aa20.37■□□□□ 0.85
CLPB-212ENST00000543042 POTEDQ86YR6 584 aa20.37■□□□□ 0.85
CLPB-212ENST00000543042 IQUBQ8NA54 791 aa20.37■□□□□ 0.85
CLPB-212ENST00000543042 ACER1Q8TDN7 264 aa20.37■□□□□ 0.85
CLPB-212ENST00000543042 LRRC15Q8TF66 581 aa20.37■□□□□ 0.85
CLPB-212ENST00000543042 GOLGA6L6A8MZA4 724 aa20.36■□□□□ 0.85
CLPB-212ENST00000543042 hCG_1984214I3L0E3 225 aa20.36■□□□□ 0.85
CLPB-212ENST00000543042 WNT10BO00744 389 aa20.36■□□□□ 0.85
CLPB-212ENST00000543042 TDP2O95551 362 aa20.36■□□□□ 0.85
CLPB-212ENST00000543042 MYL5Q02045 173 aa20.36■□□□□ 0.85
CLPB-212ENST00000543042 CUL4BQ13620 913 aa20.36■□□□□ 0.85
CLPB-212ENST00000543042 PTPN21Q16825 1174 aa20.36■□□□□ 0.85
CLPB-212ENST00000543042 ZNF713Q8N859 430 aaPredicted RBP20.36■□□□□ 0.85
CLPB-212ENST00000543042 DCAF4Q8WV16 495 aa20.36■□□□□ 0.85
CLPB-212ENST00000543042 RIC8AQ9NPQ8 531 aa20.36■□□□□ 0.85
CLPB-212ENST00000543042 USP17L15C9J2P7 530 aa20.36■□□□□ 0.85
CLPB-212ENST00000543042 USP17L13C9JLJ4 530 aa20.36■□□□□ 0.85
CLPB-212ENST00000543042 USP17L11C9JVI0 530 aa20.36■□□□□ 0.85
CLPB-212ENST00000543042 USP17L18D6R9N7 530 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms