RNA–Protein interactions for RNA: ENST00000542611.5

NBR1-202, Transcript of NBR1, autophagy cargo receptor, humanhuman

TSL 2 BASIC

Gene NBR1, Length 2,703 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-202ENST00000542611 CNNM2Q9H8M5 875 aa13.56□□□□□ -0.24
NBR1-202ENST00000542611 GOLGA6AQ9NYA3 693 aa13.56□□□□□ -0.24
NBR1-202ENST00000542611 TAOK2Q9UL54 1235 aa13.56□□□□□ -0.24
NBR1-202ENST00000542611 SKAP2O75563 359 aaPredicted RBP13.55□□□□□ -0.24
NBR1-202ENST00000542611 GCKP35557 465 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 METAP2P50579 478 aaKnown RBP eCLIP13.55□□□□□ -0.24
NBR1-202ENST00000542611 RWDD2BP57060 319 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 SPATS2Q86XZ4 545 aaKnown RBP13.55□□□□□ -0.24
NBR1-202ENST00000542611 TC2NQ8N9U0 490 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 NOA1Q8NC60 698 aaKnown RBP13.55□□□□□ -0.24
NBR1-202ENST00000542611 KRT23Q9C075 422 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 RGS17Q9UGC6 210 aaPredicted RBP13.55□□□□□ -0.24
NBR1-202ENST00000542611 GGA1Q9UJY5 639 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 LRRC37AA6NMS7 1700 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 COL11A2P13942 1736 aaPredicted RBP13.55□□□□□ -0.24
NBR1-202ENST00000542611 NRXN2Q9P2S2 1712 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 A0A1B0GVL5 298 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 IPO7O95373 1038 aaKnown RBP13.55□□□□□ -0.24
NBR1-202ENST00000542611 MMP10P09238 476 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 HOXA10P31260 410 aaPredicted RBP13.55□□□□□ -0.24
NBR1-202ENST00000542611 SLC4A8Q2Y0W8 1093 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 OTUD7BQ6GQQ9 843 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 OLFM4Q6UX06 510 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 NLGN1Q8N2Q7 840 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 COG1Q8WTW3 980 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 LZTFL1Q9NQ48 299 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 GJB4Q9NTQ9 266 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 POLLQ9UGP5 575 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 DUOX1Q9NRD9 1551 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 LTBP1Q14766 1721 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 ECM29Q5VYK3 1845 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 AGPSO00116 658 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 PRDM1O75626 825 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 CDC27P30260 824 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 NDUFA8P51970 172 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 DIXDC1Q155Q3 683 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 KIRREL3Q8IZU9 778 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 PDILTQ8N807 584 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 MICAL1Q8TDZ2 1067 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 VCPKMTQ9H867 229 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 KIF9Q9HAQ2 790 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 FANCLQ9NW38 375 aa13.55□□□□□ -0.24
NBR1-202ENST00000542611 LAMB1P07942 1786 aa13.54□□□□□ -0.24
NBR1-202ENST00000542611 KLRG2A4D1S0 409 aaPredicted RBP13.54□□□□□ -0.24
NBR1-202ENST00000542611 CAND2O75155 1236 aa13.54□□□□□ -0.24
NBR1-202ENST00000542611 BBOX1O75936 387 aa13.54□□□□□ -0.24
NBR1-202ENST00000542611 LDHBP07195 334 aaKnown RBP13.54□□□□□ -0.24
NBR1-202ENST00000542611 CCDC175P0C221 793 aa13.54□□□□□ -0.24
NBR1-202ENST00000542611 CCDC40Q4G0X9 1142 aa13.54□□□□□ -0.24
NBR1-202ENST00000542611 CEP57Q86XR8 500 aa13.54□□□□□ -0.24
NBR1-202ENST00000542611 NUCKS1Q9H1E3 243 aaKnown RBP13.54□□□□□ -0.24
NBR1-202ENST00000542611 INTS13Q9NVM9 706 aa13.54□□□□□ -0.24
NBR1-202ENST00000542611 IRAK4Q9NWZ3 460 aa13.54□□□□□ -0.24
NBR1-202ENST00000542611 KIAA1551Q9HCM1 1747 aa13.54□□□□□ -0.24
NBR1-202ENST00000542611 PPEF1O14829 653 aaPredicted RBP13.54□□□□□ -0.24
NBR1-202ENST00000542611 ZBTB43O43298 467 aa13.54□□□□□ -0.24
NBR1-202ENST00000542611 KIF5CO60282 957 aa13.54□□□□□ -0.24
NBR1-202ENST00000542611 AP1G2O75843 785 aa13.54□□□□□ -0.24
NBR1-202ENST00000542611 SLC3A2P08195 630 aaKnown RBP13.54□□□□□ -0.24
NBR1-202ENST00000542611 RBM5P52756 815 aaKnown RBP eCLIP13.54□□□□□ -0.24
NBR1-202ENST00000542611 ADKP55263 362 aaKnown RBP13.54□□□□□ -0.24
NBR1-202ENST00000542611 NAA25Q14CX7 972 aa13.54□□□□□ -0.24
NBR1-202ENST00000542611 WHAMMP3Q1A5X7 153 aa13.54□□□□□ -0.24
NBR1-202ENST00000542611 POTEAQ6S8J7 498 aa13.54□□□□□ -0.24
NBR1-202ENST00000542611 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.54□□□□□ -0.24
NBR1-202ENST00000542611 YTHDF3Q7Z739 585 aaKnown RBP13.54□□□□□ -0.24
NBR1-202ENST00000542611 TBC1D16Q8TBP0 767 aa13.54□□□□□ -0.24
NBR1-202ENST00000542611 BRIP1Q9BX63 1249 aa13.54□□□□□ -0.24
NBR1-202ENST00000542611 CD209Q9NNX6 404 aa13.54□□□□□ -0.24
NBR1-202ENST00000542611 CPSF2Q9P2I0 782 aaKnown RBP13.54□□□□□ -0.24
NBR1-202ENST00000542611 PCDHA7Q9UN72 937 aa13.54□□□□□ -0.24
NBR1-202ENST00000542611 CTAGE9A4FU28 777 aa13.53□□□□□ -0.24
NBR1-202ENST00000542611 USP17L12C9JPN9 530 aa13.53□□□□□ -0.24
NBR1-202ENST00000542611 USP17L21D6R901 530 aa13.53□□□□□ -0.24
NBR1-202ENST00000542611 C6orf229H3BNL8 230 aa13.53□□□□□ -0.24
NBR1-202ENST00000542611 EZRP15311 586 aaKnown RBP13.53□□□□□ -0.24
NBR1-202ENST00000542611 TRAF1Q13077 416 aa13.53□□□□□ -0.24
NBR1-202ENST00000542611 MTF1Q14872 753 aa13.53□□□□□ -0.24
NBR1-202ENST00000542611 PLCB4Q15147 1175 aa13.53□□□□□ -0.24
NBR1-202ENST00000542611 ATL3Q6DD88 541 aa13.53□□□□□ -0.24
NBR1-202ENST00000542611 SGMS1Q86VZ5 419 aa13.53□□□□□ -0.24
NBR1-202ENST00000542611 WDR66Q8TBY9 1149 aa13.53□□□□□ -0.24
NBR1-202ENST00000542611 PHKBQ93100 1093 aa13.53□□□□□ -0.24
NBR1-202ENST00000542611 ZNF396Q96N95 335 aaPredicted RBP13.53□□□□□ -0.24
NBR1-202ENST00000542611 CRAMP1Q96RY5 1269 aa13.53□□□□□ -0.24
NBR1-202ENST00000542611 SH3GL2Q99962 352 aa13.53□□□□□ -0.24
NBR1-202ENST00000542611 CENPHQ9H3R5 247 aa13.53□□□□□ -0.24
NBR1-202ENST00000542611 RNF41Q9H4P4 317 aaPredicted RBP13.53□□□□□ -0.24
NBR1-202ENST00000542611 ATP6V0A4Q9HBG4 840 aa13.53□□□□□ -0.24
NBR1-202ENST00000542611 DCP1AQ9NPI6 582 aaPredicted RBP13.53□□□□□ -0.24
NBR1-202ENST00000542611 NDUFAB1O14561 156 aa13.53□□□□□ -0.24
NBR1-202ENST00000542611 ATP2B4P23634 1241 aa13.53□□□□□ -0.24
NBR1-202ENST00000542611 SLC8A3P57103 927 aa13.53□□□□□ -0.24
NBR1-202ENST00000542611 ZNF569Q5MCW4 686 aa13.53□□□□□ -0.24
NBR1-202ENST00000542611 PARD3BQ8TEW8 1205 aa13.53□□□□□ -0.24
NBR1-202ENST00000542611 THOC1Q96FV9 657 aaKnown RBP13.53□□□□□ -0.24
NBR1-202ENST00000542611 AIFM3Q96NN9 605 aa13.53□□□□□ -0.24
NBR1-202ENST00000542611 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.53□□□□□ -0.24
NBR1-202ENST00000542611 CRNKL1Q9BZJ0 848 aaKnown RBP13.53□□□□□ -0.24
NBR1-202ENST00000542611 SLC40A1Q9NP59 571 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms