RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 TTC38Q5R3I4 469 aa5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 PDXDC2PQ6P474 469 aa5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 IQCA1Q86XH1 822 aa5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 SRBD1Q8N5C6 995 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 RBM46Q8TBY0 533 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 DHX58Q96C10 678 aa5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 CCDC51Q96ER9 411 aa5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 FAM84BQ96KN1 310 aaPredicted RBP5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 CTAGE1Q96RT6 745 aa5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 PYM1Q9BRP8 204 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 CARD6Q9BX69 1037 aa5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 LIMA1Q9UHB6 759 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 ZHX1Q9UKY1 873 aaPredicted RBP5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 MINPP1Q9UNW1 487 aa5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 ZNF652Q9Y2D9 606 aa5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 BAZ2AQ9UIF9 1905 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 XDHP47989 1333 aa5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 SPATA31A1Q5TZJ5 1347 aa5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 SYNRGQ9UMZ2 1314 aa5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 CYP2D7A0A087X1C5 515 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 WTIPA6NIX2 430 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 NPHP1O15259 732 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 MFAP3LO75121 409 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 PRDM1O75626 825 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 CCDC175P0C221 793 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 ATP2B1P20020 1258 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 PRSS12P56730 875 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 GNG11P61952 73 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 RBL2Q08999 1139 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 IL17AQ16552 155 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 PFKFB3Q16875 520 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 ERFEQ4G0M1 354 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 NOM1Q5C9Z4 860 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 RAD9BQ6WBX8 426 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 FAM196AQ6ZSG2 479 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 RASGRP2Q7LDG7 609 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 ANKRD18AQ8IVF6 992 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 GPR161Q8N6U8 529 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 C4orf32Q8N8J7 132 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 MARCH10Q8NA82 808 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 MNS1Q8NEH6 495 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 ANKS1AQ92625 1134 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 RABGGTAQ92696 567 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 NSUN4Q96CB9 384 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 MTRQ99707 1265 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 MRPL44Q9H9J2 332 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 BRMS1Q9HCU9 246 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 ARGLU1Q9NWB6 273 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 ABCF2Q9UG63 623 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 IQSEC3Q9UPP2 1182 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 MTMR7Q9Y216 660 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 THSD7AQ9UPZ6 1657 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 hCG_1642624A0A1W2PR95 340 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 RCCD1A6NED2 376 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 MOXD2PA6NHM9 499 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 SOWAHDA6NJG2 315 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 USP17L12C9JPN9 530 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 USP17L21D6R901 530 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 LILRB3O75022 631 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 IGSF3O75054 1194 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 GYPCP04921 128 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 SCG2P13521 617 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 CASP1P29466 404 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 AFMP43652 599 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 PPP2R3AQ06190 1150 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 TUBB2AQ13885 445 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 MTF1Q14872 753 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 ZNF174Q15697 407 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 DDB1Q16531 1140 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 CAVIN4Q5BKX8 364 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 ARL6IP4Q66PJ3 421 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 RCSD1Q6JBY9 416 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 TMCO3Q6UWJ1 677 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 IGSF22Q8N9C0 903 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 IQUBQ8NA54 791 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 SMARCC1Q92922 1105 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 ZDHHC16Q969W1 377 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 DESI2Q9BSY9 194 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 TUBB2BQ9BVA1 445 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 DCP1AQ9NPI6 582 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 ATP8A2Q9NTI2 1148 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 FAM198AQ9UFP1 575 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 RWDD2AQ9UIY3 292 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 IRS2Q9Y4H2 1338 aa5.88□□□□□ -1.47
ATPAF1-212ENST00000542495 COL24A1Q17RW2 1714 aa5.87□□□□□ -1.47
ATPAF1-212ENST00000542495 TAF1P21675 1872 aa5.87□□□□□ -1.47
ATPAF1-212ENST00000542495 M0R2N6 131 aa5.87□□□□□ -1.47
ATPAF1-212ENST00000542495 ADAMTS3O15072 1205 aa5.87□□□□□ -1.47
ATPAF1-212ENST00000542495 TBC1D8O95759 1140 aa5.87□□□□□ -1.47
ATPAF1-212ENST00000542495 LONP1P36776 959 aaKnown RBP5.87□□□□□ -1.47
ATPAF1-212ENST00000542495 STX17P56962 302 aa5.87□□□□□ -1.47
ATPAF1-212ENST00000542495 MECOMQ03112 1051 aa5.87□□□□□ -1.47
ATPAF1-212ENST00000542495 SPAG1Q07617 926 aa5.87□□□□□ -1.47
ATPAF1-212ENST00000542495 SEMA3FQ13275 785 aa5.87□□□□□ -1.47
ATPAF1-212ENST00000542495 KRT31Q15323 416 aa5.87□□□□□ -1.47
ATPAF1-212ENST00000542495 FILIP1LQ4L180 1135 aa5.87□□□□□ -1.47
ATPAF1-212ENST00000542495 FAM182BQ5T319 152 aa5.87□□□□□ -1.47
ATPAF1-212ENST00000542495 ZNF658Q5TYW1 1059 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-212ENST00000542495 CC2D1AQ6P1N0 951 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms