RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 C19orf47Q8N9M1 422 aaKnown RBP11.66□□□□□ -0.54
MRPS35-204ENST00000542199 CCDC74BQ96LY2 380 aa11.66□□□□□ -0.54
MRPS35-204ENST00000542199 SPOCK3Q9BQ16 436 aa11.66□□□□□ -0.54
MRPS35-204ENST00000542199 LTBP3Q9NS15 1303 aa11.65□□□□□ -0.54
MRPS35-204ENST00000542199 LARP1BQ659C4 914 aaKnown RBP11.65□□□□□ -0.54
MRPS35-204ENST00000542199 DNAJB8Q8NHS0 232 aa11.65□□□□□ -0.54
MRPS35-204ENST00000542199 MFSD14AQ96MC6 490 aa11.65□□□□□ -0.54
MRPS35-204ENST00000542199 TBC1D32Q96NH3 1257 aa11.65□□□□□ -0.54
MRPS35-204ENST00000542199 DUSP23Q9BVJ7 150 aa11.65□□□□□ -0.54
MRPS35-204ENST00000542199 LNPKQ9C0E8 428 aa11.65□□□□□ -0.54
MRPS35-204ENST00000542199 SETD1AO15047 1707 aaKnown RBP11.65□□□□□ -0.54
MRPS35-204ENST00000542199 ASXL1Q8IXJ9 1541 aa11.65□□□□□ -0.55
MRPS35-204ENST00000542199 SPATA31A6Q5VVP1 1343 aa11.64□□□□□ -0.55
MRPS35-204ENST00000542199 SETD5Q9C0A6 1442 aa11.64□□□□□ -0.55
MRPS35-204ENST00000542199 FAM87AP0C7U9 286 aa11.64□□□□□ -0.55
MRPS35-204ENST00000542199 INTS3Q68E01 1043 aaKnown RBP11.64□□□□□ -0.55
MRPS35-204ENST00000542199 GPAT2Q6NUI2 795 aa11.64□□□□□ -0.55
MRPS35-204ENST00000542199 CDH24Q86UP0 819 aa11.64□□□□□ -0.55
MRPS35-204ENST00000542199 TMEM192Q8IY95 271 aa11.64□□□□□ -0.55
MRPS35-204ENST00000542199 MICAL1Q8TDZ2 1067 aa11.64□□□□□ -0.55
MRPS35-204ENST00000542199 ANKRD30BQ9BXX2 1392 aa11.64□□□□□ -0.55
MRPS35-204ENST00000542199 ADGRF5Q8IZF2 1346 aa11.63□□□□□ -0.55
MRPS35-204ENST00000542199 B2RBV5 119 aa11.63□□□□□ -0.55
MRPS35-204ENST00000542199 GBP1P32455 592 aa11.63□□□□□ -0.55
MRPS35-204ENST00000542199 RAB33AQ14088 237 aa11.63□□□□□ -0.55
MRPS35-204ENST00000542199 FBXL6Q8N531 539 aa11.63□□□□□ -0.55
MRPS35-204ENST00000542199 SLC6A18Q96N87 628 aa11.63□□□□□ -0.55
MRPS35-204ENST00000542199 PCDHB10Q9UN67 800 aa11.63□□□□□ -0.55
MRPS35-204ENST00000542199 PPLO60437 1756 aa11.63□□□□□ -0.55
MRPS35-204ENST00000542199 LRP6O75581 1613 aa11.63□□□□□ -0.55
MRPS35-204ENST00000542199 CNTNAP4Q9C0A0 1308 aa11.62□□□□□ -0.55
MRPS35-204ENST00000542199 EOMESO95936 686 aa11.62□□□□□ -0.55
MRPS35-204ENST00000542199 ZAR1Q86SH2 424 aa11.62□□□□□ -0.55
MRPS35-204ENST00000542199 TRIM55Q9BYV6 548 aa11.62□□□□□ -0.55
MRPS35-204ENST00000542199 R3HCC1Q9Y3T6 440 aaKnown RBP11.62□□□□□ -0.55
MRPS35-204ENST00000542199 C1orf167Q5SNV9 1468 aa11.62□□□□□ -0.55
MRPS35-204ENST00000542199 TECPR2O15040 1411 aa11.61□□□□□ -0.55
MRPS35-204ENST00000542199 NALCNQ8IZF0 1738 aa11.61□□□□□ -0.55
MRPS35-204ENST00000542199 FAM170BA6NMN3 283 aa11.61□□□□□ -0.55
MRPS35-204ENST00000542199 SERINC3Q13530 473 aa11.61□□□□□ -0.55
MRPS35-204ENST00000542199 RSPO4Q2I0M5 234 aaPredicted RBP11.61□□□□□ -0.55
MRPS35-204ENST00000542199 RGL3Q3MIN7 710 aa11.61□□□□□ -0.55
MRPS35-204ENST00000542199 DPH6Q7L8W6 267 aa11.61□□□□□ -0.55
MRPS35-204ENST00000542199 ZNF512BQ96KM6 892 aaPredicted RBP11.61□□□□□ -0.55
MRPS35-204ENST00000542199 ST7Q9NRC1 585 aa11.61□□□□□ -0.55
MRPS35-204ENST00000542199 PIK3C2GO75747 1445 aa11.6□□□□□ -0.55
MRPS35-204ENST00000542199 RAB3GAP2Q9H2M9 1393 aa11.6□□□□□ -0.55
MRPS35-204ENST00000542199 MSTNO14793 375 aa11.6□□□□□ -0.55
MRPS35-204ENST00000542199 NKAPLQ5M9Q1 402 aa11.6□□□□□ -0.55
MRPS35-204ENST00000542199 TDRD10Q5VZ19 366 aaKnown RBP11.6□□□□□ -0.55
MRPS35-204ENST00000542199 RNF43Q68DV7 783 aa11.6□□□□□ -0.55
MRPS35-204ENST00000542199 PPFIBP1Q86W92 1011 aa11.6□□□□□ -0.55
MRPS35-204ENST00000542199 FAM86C1Q9NVL1 165 aa11.6□□□□□ -0.55
MRPS35-204ENST00000542199 CEP131Q9UPN4 1083 aa11.6□□□□□ -0.55
MRPS35-204ENST00000542199 SHPRHQ149N8 1683 aa11.59□□□□□ -0.55
MRPS35-204ENST00000542199 SRCAPQ6ZRS2 3230 aa11.59□□□□□ -0.55
MRPS35-204ENST00000542199 F13BP05160 661 aa11.59□□□□□ -0.55
MRPS35-204ENST00000542199 CCNFP41002 786 aa11.59□□□□□ -0.55
MRPS35-204ENST00000542199 NFIAQ12857 509 aa11.59□□□□□ -0.55
MRPS35-204ENST00000542199 NBPF6Q5VWK0 638 aa11.59□□□□□ -0.55
MRPS35-204ENST00000542199 ZNF765Q7L2R6 523 aa11.59□□□□□ -0.55
MRPS35-204ENST00000542199 DDX17Q92841 729 aaKnown RBP11.59□□□□□ -0.55
MRPS35-204ENST00000542199 LRRC59Q96AG4 307 aaKnown RBP11.59□□□□□ -0.55
MRPS35-204ENST00000542199 NBPF4Q96M43 638 aa11.59□□□□□ -0.55
MRPS35-204ENST00000542199 NHSL1Q5SYE7 1610 aa11.59□□□□□ -0.55
MRPS35-204ENST00000542199 LRPPRCP42704 1394 aaKnown RBP11.58□□□□□ -0.56
MRPS35-204ENST00000542199 ABCC11Q96J66 1382 aa11.58□□□□□ -0.56
MRPS35-204ENST00000542199 H2AFB1P0C5Y9 115 aa11.58□□□□□ -0.56
MRPS35-204ENST00000542199 H2AFB2P0C5Z0 115 aa11.58□□□□□ -0.56
MRPS35-204ENST00000542199 DDR2Q16832 855 aa11.58□□□□□ -0.56
MRPS35-204ENST00000542199 CCDC144BQ3MJ40 725 aa11.58□□□□□ -0.56
MRPS35-204ENST00000542199 OGFOD3Q6PK18 319 aa11.58□□□□□ -0.56
MRPS35-204ENST00000542199 C6orf15Q6UXA7 325 aaPredicted RBP11.58□□□□□ -0.56
MRPS35-204ENST00000542199 KREMEN1Q96MU8 473 aa11.58□□□□□ -0.56
MRPS35-204ENST00000542199 TPX2Q9ULW0 747 aaKnown RBP11.58□□□□□ -0.56
MRPS35-204ENST00000542199 SLC12A7Q9Y666 1083 aa11.58□□□□□ -0.56
MRPS35-204ENST00000542199 NRXN1Q9ULB1 1477 aa11.57□□□□□ -0.56
MRPS35-204ENST00000542199 C9IYK1 514 aa11.57□□□□□ -0.56
MRPS35-204ENST00000542199 CLEC3AO75596 197 aa11.57□□□□□ -0.56
MRPS35-204ENST00000542199 FAM214BQ7L5A3 538 aa11.57□□□□□ -0.56
MRPS35-204ENST00000542199 KLHL6Q8WZ60 621 aa11.57□□□□□ -0.56
MRPS35-204ENST00000542199 ORAI2Q96SN7 254 aa11.57□□□□□ -0.56
MRPS35-204ENST00000542199 OSBPL2Q9H1P3 480 aa11.57□□□□□ -0.56
MRPS35-204ENST00000542199 SUCOQ9UBS9 1254 aaKnown RBP11.57□□□□□ -0.56
MRPS35-204ENST00000542199 ZNF214Q9UL59 606 aaPredicted RBP11.57□□□□□ -0.56
MRPS35-204ENST00000542199 U3KQE9 123 aa11.57□□□□□ -0.56
MRPS35-204ENST00000542199 LAMC1P11047 1609 aa11.57□□□□□ -0.56
MRPS35-204ENST00000542199 PNPLA6Q8IY17 1366 aa11.56□□□□□ -0.56
MRPS35-204ENST00000542199 FSTP19883 344 aa11.56□□□□□ -0.56
MRPS35-204ENST00000542199 FXNQ16595 210 aa11.56□□□□□ -0.56
MRPS35-204ENST00000542199 MEX3CQ5U5Q3 659 aaKnown RBP11.56□□□□□ -0.56
MRPS35-204ENST00000542199 ZNF772Q68DY9 489 aaPredicted RBP11.56□□□□□ -0.56
MRPS35-204ENST00000542199 CDC42BPGQ6DT37 1551 aa11.56□□□□□ -0.56
MRPS35-204ENST00000542199 VHLLQ6RSH7 139 aa11.56□□□□□ -0.56
MRPS35-204ENST00000542199 GIMAP7Q8NHV1 300 aa11.56□□□□□ -0.56
MRPS35-204ENST00000542199 HEXIM2Q96MH2 286 aaKnown RBP11.56□□□□□ -0.56
MRPS35-204ENST00000542199 DBNDD2Q9BQY9 259 aa11.56□□□□□ -0.56
MRPS35-204ENST00000542199 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.56□□□□□ -0.56
MRPS35-204ENST00000542199 PHAXQ9H814 394 aaKnown RBP11.56□□□□□ -0.56
MRPS35-204ENST00000542199 IFT172Q9UG01 1749 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms