RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 USP14P54578 494 aa14.34□□□□□ -0.11
SMAD3-204ENST00000540846 TPRNQ4KMQ1 711 aa14.34□□□□□ -0.11
SMAD3-204ENST00000540846 FAM83BQ5T0W9 1011 aa14.34□□□□□ -0.11
SMAD3-204ENST00000540846 ANO1Q5XXA6 986 aa14.34□□□□□ -0.11
SMAD3-204ENST00000540846 PRRT2Q7Z6L0 340 aaPredicted RBP14.34□□□□□ -0.11
SMAD3-204ENST00000540846 NOSTRINQ8IVI9 506 aa14.34□□□□□ -0.11
SMAD3-204ENST00000540846 DIS3L2Q8IYB7 885 aaKnown RBP14.34□□□□□ -0.11
SMAD3-204ENST00000540846 WNK4Q96J92 1243 aa14.34□□□□□ -0.11
SMAD3-204ENST00000540846 TSPY26PQ9H489 355 aa14.34□□□□□ -0.11
SMAD3-204ENST00000540846 GPCPD1Q9NPB8 672 aa14.34□□□□□ -0.11
SMAD3-204ENST00000540846 CLIC4Q9Y696 253 aa14.34□□□□□ -0.11
SMAD3-204ENST00000540846 SMCHD1A6NHR9 2005 aa14.33□□□□□ -0.11
SMAD3-204ENST00000540846 CXCL11O14625 94 aa14.33□□□□□ -0.12
SMAD3-204ENST00000540846 XBP1P17861 261 aa14.33□□□□□ -0.12
SMAD3-204ENST00000540846 GNAQP50148 359 aa14.33□□□□□ -0.12
SMAD3-204ENST00000540846 HUNKP57058 714 aa14.33□□□□□ -0.12
SMAD3-204ENST00000540846 GNL2Q13823 731 aaKnown RBP14.33□□□□□ -0.12
SMAD3-204ENST00000540846 STK38Q15208 465 aa14.33□□□□□ -0.12
SMAD3-204ENST00000540846 CCDC96Q2M329 555 aa14.33□□□□□ -0.12
SMAD3-204ENST00000540846 SHISA4Q96DD7 197 aa14.33□□□□□ -0.12
SMAD3-204ENST00000540846 MTMR8Q96EF0 704 aa14.33□□□□□ -0.12
SMAD3-204ENST00000540846 SLC10A4Q96EP9 437 aa14.33□□□□□ -0.12
SMAD3-204ENST00000540846 LZTS2Q9BRK4 669 aa14.33□□□□□ -0.12
SMAD3-204ENST00000540846 PANK2Q9BZ23 570 aa14.33□□□□□ -0.12
SMAD3-204ENST00000540846 UBA5Q9GZZ9 404 aa14.33□□□□□ -0.12
SMAD3-204ENST00000540846 RBSNQ9H1K0 784 aa14.33□□□□□ -0.12
SMAD3-204ENST00000540846 NUP62CLQ9H1M0 184 aa14.33□□□□□ -0.12
SMAD3-204ENST00000540846 DACT1Q9NYF0 836 aa14.33□□□□□ -0.12
SMAD3-204ENST00000540846 TLL2Q9Y6L7 1015 aa14.33□□□□□ -0.12
SMAD3-204ENST00000540846 A0A1W2PQ27 194 aa14.32□□□□□ -0.12
SMAD3-204ENST00000540846 A0A1W2PQ64 194 aa14.32□□□□□ -0.12
SMAD3-204ENST00000540846 A0A1W2PQD8 194 aa14.32□□□□□ -0.12
SMAD3-204ENST00000540846 RAD21O60216 631 aa14.32□□□□□ -0.12
SMAD3-204ENST00000540846 PLA2G6O60733 806 aa14.32□□□□□ -0.12
SMAD3-204ENST00000540846 SLC16A2P36021 539 aa14.32□□□□□ -0.12
SMAD3-204ENST00000540846 ME1P48163 572 aa14.32□□□□□ -0.12
SMAD3-204ENST00000540846 MS4A4AQ96JQ5 239 aa14.32□□□□□ -0.12
SMAD3-204ENST00000540846 PHF20Q9BVI0 1012 aa14.32□□□□□ -0.12
SMAD3-204ENST00000540846 CLSTN2Q9H4D0 955 aa14.32□□□□□ -0.12
SMAD3-204ENST00000540846 FBXO28Q9NVF7 368 aa14.32□□□□□ -0.12
SMAD3-204ENST00000540846 KCNJ14Q9UNX9 436 aa14.32□□□□□ -0.12
SMAD3-204ENST00000540846 V9GY48 417 aaPredicted RBP14.32□□□□□ -0.12
SMAD3-204ENST00000540846 BTBD18B2RXH4 712 aa14.31□□□□□ -0.12
SMAD3-204ENST00000540846 TMEM232C9JQI7 657 aa14.31□□□□□ -0.12
SMAD3-204ENST00000540846 SPTLC2O15270 562 aa14.31□□□□□ -0.12
SMAD3-204ENST00000540846 SCG2P13521 617 aa14.31□□□□□ -0.12
SMAD3-204ENST00000540846 SLC39A14Q15043 492 aa14.31□□□□□ -0.12
SMAD3-204ENST00000540846 SPRYD7Q5W111 196 aa14.31□□□□□ -0.12
SMAD3-204ENST00000540846 ADALQ6DHV7 355 aa14.31□□□□□ -0.12
SMAD3-204ENST00000540846 RBM43Q6ZSC3 357 aaKnown RBP14.31□□□□□ -0.12
SMAD3-204ENST00000540846 RASAL3Q86YV0 1011 aa14.31□□□□□ -0.12
SMAD3-204ENST00000540846 ADGRF4Q8IZF3 695 aa14.31□□□□□ -0.12
SMAD3-204ENST00000540846 FUCA2Q9BTY2 467 aa14.31□□□□□ -0.12
SMAD3-204ENST00000540846 JMJD4Q9H9V9 463 aa14.31□□□□□ -0.12
SMAD3-204ENST00000540846 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.31□□□□□ -0.12
SMAD3-204ENST00000540846 PCDHA7Q9UN72 937 aa14.31□□□□□ -0.12
SMAD3-204ENST00000540846 hCG_1642624A0A1W2PR95 340 aa14.3□□□□□ -0.12
SMAD3-204ENST00000540846 NR1I2O75469 434 aa14.3□□□□□ -0.12
SMAD3-204ENST00000540846 ZBTB48P10074 688 aaPredicted RBP14.3□□□□□ -0.12
SMAD3-204ENST00000540846 STAT2P52630 851 aa14.3□□□□□ -0.12
SMAD3-204ENST00000540846 PFKFB3Q16875 520 aaPredicted RBP14.3□□□□□ -0.12
SMAD3-204ENST00000540846 TREML2Q5T2D2 321 aa14.3□□□□□ -0.12
SMAD3-204ENST00000540846 CCAR1Q8IX12 1150 aaKnown RBP14.3□□□□□ -0.12
SMAD3-204ENST00000540846 PROCA1Q8NCQ7 364 aaPredicted RBP14.3□□□□□ -0.12
SMAD3-204ENST00000540846 MRPS27Q92552 414 aaKnown RBP14.3□□□□□ -0.12
SMAD3-204ENST00000540846 GOLPH3LQ9H4A5 285 aa14.3□□□□□ -0.12
SMAD3-204ENST00000540846 RPAP3Q9H6T3 665 aaPredicted RBP14.3□□□□□ -0.12
SMAD3-204ENST00000540846 VPS54Q9P1Q0 977 aa14.3□□□□□ -0.12
SMAD3-204ENST00000540846 TMEM88BA6NKF7 163 aa14.3□□□□□ -0.12
SMAD3-204ENST00000540846 PPP1R11O60927 126 aaPredicted RBP14.3□□□□□ -0.12
SMAD3-204ENST00000540846 FAM160A1Q05DH4 1040 aa14.3□□□□□ -0.12
SMAD3-204ENST00000540846 PTPAQ15257 358 aa14.3□□□□□ -0.12
SMAD3-204ENST00000540846 SYDE2Q5VT97 1194 aa14.3□□□□□ -0.12
SMAD3-204ENST00000540846 GPAT2Q6NUI2 795 aa14.3□□□□□ -0.12
SMAD3-204ENST00000540846 CCDC73Q6ZRK6 1079 aa14.3□□□□□ -0.12
SMAD3-204ENST00000540846 FSIP1Q8NA03 581 aa14.3□□□□□ -0.12
SMAD3-204ENST00000540846 PRR12Q9ULL5 1215 aa14.3□□□□□ -0.12
SMAD3-204ENST00000540846 FAM155AB1AL88 458 aaPredicted RBP14.29□□□□□ -0.12
SMAD3-204ENST00000540846 PPP6R2O75170 966 aa14.29□□□□□ -0.12
SMAD3-204ENST00000540846 KRT2P35908 639 aa14.29□□□□□ -0.12
SMAD3-204ENST00000540846 NR5A1Q13285 461 aa14.29□□□□□ -0.12
SMAD3-204ENST00000540846 SF3A1Q15459 793 aaKnown RBP14.29□□□□□ -0.12
SMAD3-204ENST00000540846 NPY5RQ15761 445 aa14.29□□□□□ -0.12
SMAD3-204ENST00000540846 RILPL1Q5EBL4 403 aa14.29□□□□□ -0.12
SMAD3-204ENST00000540846 AXDND1Q5T1B0 1012 aaPredicted RBP14.29□□□□□ -0.12
SMAD3-204ENST00000540846 RGMBQ6NW40 437 aa14.29□□□□□ -0.12
SMAD3-204ENST00000540846 POTEEQ6S8J3 1075 aa14.29□□□□□ -0.12
SMAD3-204ENST00000540846 FAM177A1Q8N128 213 aaPredicted RBP14.29□□□□□ -0.12
SMAD3-204ENST00000540846 JMYQ8N9B5 988 aa14.29□□□□□ -0.12
SMAD3-204ENST00000540846 ENGASEQ8NFI3 743 aa14.29□□□□□ -0.12
SMAD3-204ENST00000540846 HHIPL1Q96JK4 782 aa14.29□□□□□ -0.12
SMAD3-204ENST00000540846 PIGSQ96S52 555 aa14.29□□□□□ -0.12
SMAD3-204ENST00000540846 TNMDQ9H2S6 317 aa14.29□□□□□ -0.12
SMAD3-204ENST00000540846 SH3GLB2Q9NR46 395 aa14.29□□□□□ -0.12
SMAD3-204ENST00000540846 TMOD4Q9NZQ9 345 aa14.29□□□□□ -0.12
SMAD3-204ENST00000540846 FEM1BQ9UK73 627 aa14.29□□□□□ -0.12
SMAD3-204ENST00000540846 RBBP6Q7Z6E9 1792 aaKnown RBP14.28□□□□□ -0.12
SMAD3-204ENST00000540846 SLC10A3P09131 477 aa14.28□□□□□ -0.12
SMAD3-204ENST00000540846 HOXA7P31268 230 aaPredicted RBP14.28□□□□□ -0.12
SMAD3-204ENST00000540846 TOB1P50616 345 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms