RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 ALDH8A1Q9H2A2 487 aaPredicted RBP22.63■■□□□ 1.21
DDX55-207ENST00000540763 PLXNA1Q9UIW2 1896 aa22.62■■□□□ 1.21
DDX55-207ENST00000540763 ZNF536O15090 1300 aa22.62■■□□□ 1.21
DDX55-207ENST00000540763 STRNO43815 780 aa22.62■■□□□ 1.21
DDX55-207ENST00000540763 ICAM1P05362 532 aa22.62■■□□□ 1.21
DDX55-207ENST00000540763 ERCC3P19447 782 aa22.62■■□□□ 1.21
DDX55-207ENST00000540763 EVCP57679 992 aa22.62■■□□□ 1.21
DDX55-207ENST00000540763 PPP2R5BQ15173 497 aa22.62■■□□□ 1.21
DDX55-207ENST00000540763 TKFCQ3LXA3 575 aa22.62■■□□□ 1.21
DDX55-207ENST00000540763 FBXO46Q6PJ61 603 aaPredicted RBP22.62■■□□□ 1.21
DDX55-207ENST00000540763 PLEKHH3Q7Z736 793 aa22.62■■□□□ 1.21
DDX55-207ENST00000540763 ABRAQ8N0Z2 381 aa22.62■■□□□ 1.21
DDX55-207ENST00000540763 STAG2Q8N3U4 1231 aa22.62■■□□□ 1.21
DDX55-207ENST00000540763 NUP133Q8WUM0 1156 aa22.62■■□□□ 1.21
DDX55-207ENST00000540763 LZTS2Q9BRK4 669 aa22.62■■□□□ 1.21
DDX55-207ENST00000540763 C22orf23Q9BZE7 217 aa22.62■■□□□ 1.21
DDX55-207ENST00000540763 SMCHD1A6NHR9 2005 aa22.62■■□□□ 1.21
DDX55-207ENST00000540763 ZBTB43O43298 467 aa22.61■■□□□ 1.21
DDX55-207ENST00000540763 IRF5Q13568 498 aa22.61■■□□□ 1.21
DDX55-207ENST00000540763 ADGRF4Q8IZF3 695 aa22.61■■□□□ 1.21
DDX55-207ENST00000540763 BRF1Q92994 677 aa22.61■■□□□ 1.21
DDX55-207ENST00000540763 MTMR8Q96EF0 704 aa22.61■■□□□ 1.21
DDX55-207ENST00000540763 MYL10Q9BUA6 226 aa22.61■■□□□ 1.21
DDX55-207ENST00000540763 SPZ1Q9BXG8 430 aa22.61■■□□□ 1.21
DDX55-207ENST00000540763 BACH2Q9BYV9 841 aa22.61■■□□□ 1.21
DDX55-207ENST00000540763 UPF3BQ9BZI7 483 aaKnown RBP22.61■■□□□ 1.21
DDX55-207ENST00000540763 UBA5Q9GZZ9 404 aa22.61■■□□□ 1.21
DDX55-207ENST00000540763 RIOX1Q9H6W3 641 aa22.61■■□□□ 1.21
DDX55-207ENST00000540763 CWC22Q9HCG8 908 aaKnown RBP22.61■■□□□ 1.21
DDX55-207ENST00000540763 RAVER2Q9HCJ3 691 aaKnown RBP22.61■■□□□ 1.21
DDX55-207ENST00000540763 RBM28Q9NW13 759 aaKnown RBP22.61■■□□□ 1.21
DDX55-207ENST00000540763 FBXO40Q9UH90 709 aa22.61■■□□□ 1.21
DDX55-207ENST00000540763 BRPF3Q9ULD4 1205 aa22.61■■□□□ 1.21
DDX55-207ENST00000540763 PTPN22Q9Y2R2 807 aa22.61■■□□□ 1.21
DDX55-207ENST00000540763 IVNS1ABPQ9Y6Y0 642 aa22.61■■□□□ 1.21
DDX55-207ENST00000540763 KLF18A0A0U1RQI7 1052 aa22.6■■□□□ 1.21
DDX55-207ENST00000540763 SLC15A5A6NIM6 579 aa22.6■■□□□ 1.21
DDX55-207ENST00000540763 GRB14Q14449 540 aa22.6■■□□□ 1.21
DDX55-207ENST00000540763 MICU3Q86XE3 530 aa22.6■■□□□ 1.21
DDX55-207ENST00000540763 NCAPG2Q86XI2 1143 aa22.6■■□□□ 1.21
DDX55-207ENST00000540763 CPXCR1Q8N123 301 aa22.6■■□□□ 1.21
DDX55-207ENST00000540763 FANCBQ8NB91 859 aa22.6■■□□□ 1.21
DDX55-207ENST00000540763 CHST13Q8NET6 341 aa22.6■■□□□ 1.21
DDX55-207ENST00000540763 IL27Q8NEV9 243 aa22.6■■□□□ 1.21
DDX55-207ENST00000540763 PDRG1Q9NUG6 133 aa22.6■■□□□ 1.21
DDX55-207ENST00000540763 PTPREP23469 700 aa22.59■■□□□ 1.21
DDX55-207ENST00000540763 PRKCZQ05513 592 aa22.59■■□□□ 1.21
DDX55-207ENST00000540763 TOB2Q14106 344 aaPredicted RBP22.59■■□□□ 1.21
DDX55-207ENST00000540763 MORN1Q5T089 497 aa22.59■■□□□ 1.21
DDX55-207ENST00000540763 NUDT12Q9BQG2 462 aa22.59■■□□□ 1.21
DDX55-207ENST00000540763 JMJD4Q9H9V9 463 aa22.59■■□□□ 1.21
DDX55-207ENST00000540763 GJD2Q9UKL4 321 aa22.59■■□□□ 1.21
DDX55-207ENST00000540763 BAZ2BQ9UIF8 2168 aaKnown RBP22.58■■□□□ 1.21
DDX55-207ENST00000540763 APOBRQ0VD83 1088 aa22.58■■□□□ 1.21
DDX55-207ENST00000540763 ANKRD1Q15327 319 aa22.58■■□□□ 1.21
DDX55-207ENST00000540763 CDC37Q16543 378 aaPredicted RBP22.58■■□□□ 1.21
DDX55-207ENST00000540763 WDR78Q5VTH9 848 aa22.58■■□□□ 1.21
DDX55-207ENST00000540763 CCDC174Q6PII3 467 aa22.58■■□□□ 1.21
DDX55-207ENST00000540763 USP6NLQ92738 828 aa22.58■■□□□ 1.21
DDX55-207ENST00000540763 CCPG1Q9ULG6 757 aa22.58■■□□□ 1.21
DDX55-207ENST00000540763 CCDC196A0A1B0GTZ2 297 aa22.57■■□□□ 1.2
DDX55-207ENST00000540763 DHX16O60231 1041 aaKnown RBP22.57■■□□□ 1.2
DDX55-207ENST00000540763 FCER1AP12319 257 aa22.57■■□□□ 1.2
DDX55-207ENST00000540763 FLT3LGP49771 235 aa22.57■■□□□ 1.2
DDX55-207ENST00000540763 TRAF1Q13077 416 aa22.57■■□□□ 1.2
DDX55-207ENST00000540763 AGBL1Q96MI9 1066 aa22.57■■□□□ 1.2
DDX55-207ENST00000540763 MAF1Q9H063 256 aa22.57■■□□□ 1.2
DDX55-207ENST00000540763 CPVLQ9H3G5 476 aa22.57■■□□□ 1.2
DDX55-207ENST00000540763 GABRQQ9UN88 632 aa22.57■■□□□ 1.2
DDX55-207ENST00000540763 RIPK3Q9Y572 518 aa22.57■■□□□ 1.2
DDX55-207ENST00000540763 GOLGA8AA7E2F4 631 aa22.56■■□□□ 1.2
DDX55-207ENST00000540763 GOLGA8BA8MQT2 603 aa22.56■■□□□ 1.2
DDX55-207ENST00000540763 ZBTB5O15062 677 aa22.56■■□□□ 1.2
DDX55-207ENST00000540763 CYTH3O43739 400 aa22.56■■□□□ 1.2
DDX55-207ENST00000540763 HOXC6P09630 235 aa22.56■■□□□ 1.2
DDX55-207ENST00000540763 XRCC5P13010 732 aaKnown RBP22.56■■□□□ 1.2
DDX55-207ENST00000540763 RXRAP19793 462 aa22.56■■□□□ 1.2
DDX55-207ENST00000540763 RGS2P41220 211 aa22.56■■□□□ 1.2
DDX55-207ENST00000540763 METAP2P50579 478 aaKnown RBP eCLIP22.56■■□□□ 1.2
DDX55-207ENST00000540763 MAP2K5Q13163 448 aa22.56■■□□□ 1.2
DDX55-207ENST00000540763 RTN1Q16799 776 aa22.56■■□□□ 1.2
DDX55-207ENST00000540763 SLC35G1Q2M3R5 365 aa22.56■■□□□ 1.2
DDX55-207ENST00000540763 TMTC3Q6ZXV5 915 aa22.56■■□□□ 1.2
DDX55-207ENST00000540763 RAET1EQ8TD07 263 aa22.56■■□□□ 1.2
DDX55-207ENST00000540763 PXYLP1Q8TE99 480 aa22.56■■□□□ 1.2
DDX55-207ENST00000540763 ZNF274Q96GC6 653 aaPredicted RBP22.56■■□□□ 1.2
DDX55-207ENST00000540763 APBA2Q99767 749 aa22.56■■□□□ 1.2
DDX55-207ENST00000540763 ACAD9Q9H845 621 aa22.56■■□□□ 1.2
DDX55-207ENST00000540763 ECM2O94769 699 aaPredicted RBP22.55■■□□□ 1.2
DDX55-207ENST00000540763 SNAP25P60880 206 aa22.55■■□□□ 1.2
DDX55-207ENST00000540763 KCTD2Q14681 263 aa22.55■■□□□ 1.2
DDX55-207ENST00000540763 QRICH1Q2TAL8 776 aa22.55■■□□□ 1.2
DDX55-207ENST00000540763 NBPF11Q86T75 865 aa22.55■■□□□ 1.2
DDX55-207ENST00000540763 TRMT44Q8IYL2 757 aaKnown RBP22.55■■□□□ 1.2
DDX55-207ENST00000540763 TBC1D32Q96NH3 1257 aa22.55■■□□□ 1.2
DDX55-207ENST00000540763 MMP19Q99542 508 aa22.55■■□□□ 1.2
DDX55-207ENST00000540763 KIF2CQ99661 725 aa22.55■■□□□ 1.2
DDX55-207ENST00000540763 RNF146Q9NTX7 359 aa22.55■■□□□ 1.2
DDX55-207ENST00000540763 PTCH2Q9Y6C5 1203 aa22.55■■□□□ 1.2
DDX55-207ENST00000540763 LCTP09848 1927 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms