RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 RARBP10826 455 aa10.07□□□□□ -0.8
SFSWAP-202ENST00000535202 MAGEA10P43363 369 aaPredicted RBP10.07□□□□□ -0.8
SFSWAP-202ENST00000535202 RTP1P59025 263 aa10.07□□□□□ -0.8
SFSWAP-202ENST00000535202 SNAP25P60880 206 aa10.07□□□□□ -0.8
SFSWAP-202ENST00000535202 RCSD1Q6JBY9 416 aa10.07□□□□□ -0.8
SFSWAP-202ENST00000535202 MFSD6Q6ZSS7 791 aa10.07□□□□□ -0.8
SFSWAP-202ENST00000535202 TBC1D10CQ8IV04 446 aa10.07□□□□□ -0.8
SFSWAP-202ENST00000535202 DCAF4Q8WV16 495 aa10.07□□□□□ -0.8
SFSWAP-202ENST00000535202 LENG1Q96BZ8 264 aaPredicted RBP10.07□□□□□ -0.8
SFSWAP-202ENST00000535202 GDF15Q99988 308 aa10.07□□□□□ -0.8
SFSWAP-202ENST00000535202 ACAD9Q9H845 621 aa10.07□□□□□ -0.8
SFSWAP-202ENST00000535202 XPNPEP3Q9NQH7 507 aa10.07□□□□□ -0.8
SFSWAP-202ENST00000535202 FBXO40Q9UH90 709 aa10.07□□□□□ -0.8
SFSWAP-202ENST00000535202 ZHX1Q9UKY1 873 aaPredicted RBP10.07□□□□□ -0.8
SFSWAP-202ENST00000535202 CNPY2Q9Y2B0 182 aa10.07□□□□□ -0.8
SFSWAP-202ENST00000535202 FRMPD2Q68DX3 1309 aaPredicted RBP10.07□□□□□ -0.8
SFSWAP-202ENST00000535202 TRIOBPQ9H2D6 2365 aa10.06□□□□□ -0.8
SFSWAP-202ENST00000535202 DNAJC25-GNG10A0A024R161 153 aa10.06□□□□□ -0.8
SFSWAP-202ENST00000535202 A0A1W2PPC1 479 aa10.06□□□□□ -0.8
SFSWAP-202ENST00000535202 HIP1O00291 1037 aa10.06□□□□□ -0.8
SFSWAP-202ENST00000535202 PLA2G6O60733 806 aa10.06□□□□□ -0.8
SFSWAP-202ENST00000535202 ZNF865P0CJ78 1059 aaPredicted RBP10.06□□□□□ -0.8
SFSWAP-202ENST00000535202 TOP1P11387 765 aaKnown RBP10.06□□□□□ -0.8
SFSWAP-202ENST00000535202 ALAS1P13196 640 aa10.06□□□□□ -0.8
SFSWAP-202ENST00000535202 AKR1A1P14550 325 aa10.06□□□□□ -0.8
SFSWAP-202ENST00000535202 MDM2Q00987 491 aaPredicted RBP10.06□□□□□ -0.8
SFSWAP-202ENST00000535202 LRRC41Q15345 812 aa10.06□□□□□ -0.8
SFSWAP-202ENST00000535202 AKNAD1Q5T1N1 836 aa10.06□□□□□ -0.8
SFSWAP-202ENST00000535202 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.06□□□□□ -0.8
SFSWAP-202ENST00000535202 MSL3Q8N5Y2 521 aaKnown RBP10.06□□□□□ -0.8
SFSWAP-202ENST00000535202 FERMT2Q96AC1 680 aa10.06□□□□□ -0.8
SFSWAP-202ENST00000535202 AGBL1Q96MI9 1066 aa10.06□□□□□ -0.8
SFSWAP-202ENST00000535202 TRERF1Q96PN7 1200 aa10.06□□□□□ -0.8
SFSWAP-202ENST00000535202 TMEM47Q9BQJ4 181 aa10.06□□□□□ -0.8
SFSWAP-202ENST00000535202 RNF41Q9H4P4 317 aaPredicted RBP10.06□□□□□ -0.8
SFSWAP-202ENST00000535202 RNF146Q9NTX7 359 aa10.06□□□□□ -0.8
SFSWAP-202ENST00000535202 PRR12Q9ULL5 1215 aa10.06□□□□□ -0.8
SFSWAP-202ENST00000535202 ATP11BQ9Y2G3 1177 aa10.06□□□□□ -0.8
SFSWAP-202ENST00000535202 ZNF536O15090 1300 aa10.06□□□□□ -0.8
SFSWAP-202ENST00000535202 NEDD4P46934 1319 aa10.06□□□□□ -0.8
SFSWAP-202ENST00000535202 SYNGAP1Q96PV0 1343 aa10.06□□□□□ -0.8
SFSWAP-202ENST00000535202 ZNF213O14771 459 aa10.05□□□□□ -0.8
SFSWAP-202ENST00000535202 SNAI1O95863 264 aaPredicted RBP10.05□□□□□ -0.8
SFSWAP-202ENST00000535202 PGK1P00558 417 aa10.05□□□□□ -0.8
SFSWAP-202ENST00000535202 PCP11498 1178 aaKnown RBP10.05□□□□□ -0.8
SFSWAP-202ENST00000535202 BMP8BP34820 402 aa10.05□□□□□ -0.8
SFSWAP-202ENST00000535202 SLC16A2P36021 539 aa10.05□□□□□ -0.8
SFSWAP-202ENST00000535202 ADCYAP1R1P41586 468 aa10.05□□□□□ -0.8
SFSWAP-202ENST00000535202 NOVP48745 357 aa10.05□□□□□ -0.8
SFSWAP-202ENST00000535202 TKFCQ3LXA3 575 aa10.05□□□□□ -0.8
SFSWAP-202ENST00000535202 SYDE2Q5VT97 1194 aa10.05□□□□□ -0.8
SFSWAP-202ENST00000535202 TTBK2Q6IQ55 1244 aa10.05□□□□□ -0.8
SFSWAP-202ENST00000535202 MAMDC4Q6UXC1 1216 aa10.05□□□□□ -0.8
SFSWAP-202ENST00000535202 SLC39A5Q6ZMH5 540 aa10.05□□□□□ -0.8
SFSWAP-202ENST00000535202 ARMCX2Q7L311 632 aa10.05□□□□□ -0.8
SFSWAP-202ENST00000535202 ZNF467Q7Z7K2 595 aaPredicted RBP10.05□□□□□ -0.8
SFSWAP-202ENST00000535202 RNF180Q86T96 592 aa10.05□□□□□ -0.8
SFSWAP-202ENST00000535202 FGD4Q96M96 766 aa10.05□□□□□ -0.8
SFSWAP-202ENST00000535202 UBE2OQ9C0C9 1292 aaKnown RBP10.05□□□□□ -0.8
SFSWAP-202ENST00000535202 GPCPD1Q9NPB8 672 aa10.05□□□□□ -0.8
SFSWAP-202ENST00000535202 A1CFQ9NQ94 594 aaKnown RBP10.05□□□□□ -0.8
SFSWAP-202ENST00000535202 TCP11L1Q9NUJ3 509 aa10.05□□□□□ -0.8
SFSWAP-202ENST00000535202 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.05□□□□□ -0.8
SFSWAP-202ENST00000535202 PRKAG2Q9UGJ0 569 aa10.05□□□□□ -0.8
SFSWAP-202ENST00000535202 FAM184BQ9ULE4 1060 aa10.05□□□□□ -0.8
SFSWAP-202ENST00000535202 CCPG1Q9ULG6 757 aa10.05□□□□□ -0.8
SFSWAP-202ENST00000535202 POTEB2H3BUK9 544 aa10.04□□□□□ -0.8
SFSWAP-202ENST00000535202 SOX1O00570 391 aaPredicted RBP10.04□□□□□ -0.8
SFSWAP-202ENST00000535202 RRP9O43818 475 aaKnown RBP10.04□□□□□ -0.8
SFSWAP-202ENST00000535202 PDHBP11177 359 aa10.04□□□□□ -0.8
SFSWAP-202ENST00000535202 PDE4AP27815 886 aa10.04□□□□□ -0.8
SFSWAP-202ENST00000535202 CNTN2Q02246 1040 aa10.04□□□□□ -0.8
SFSWAP-202ENST00000535202 ACVR2BQ13705 512 aa10.04□□□□□ -0.8
SFSWAP-202ENST00000535202 TRIM60Q495X7 471 aa10.04□□□□□ -0.8
SFSWAP-202ENST00000535202 CCDC144CPQ8IYA2 1237 aa10.04□□□□□ -0.8
SFSWAP-202ENST00000535202 ESR2Q92731 530 aa10.04□□□□□ -0.8
SFSWAP-202ENST00000535202 LBHD1Q9BQE6 289 aaPredicted RBP10.04□□□□□ -0.8
SFSWAP-202ENST00000535202 ZKSCAN3Q9BRR0 538 aa10.04□□□□□ -0.8
SFSWAP-202ENST00000535202 RANBP17Q9H2T7 1088 aaKnown RBP10.04□□□□□ -0.8
SFSWAP-202ENST00000535202 PRDM5Q9NQX1 630 aaPredicted RBP10.04□□□□□ -0.8
SFSWAP-202ENST00000535202 LTBP2Q14767 1821 aa10.04□□□□□ -0.8
SFSWAP-202ENST00000535202 LRRC37A2A6NM11 1700 aa10.04□□□□□ -0.8
SFSWAP-202ENST00000535202 SYNRGQ9UMZ2 1314 aa10.04□□□□□ -0.8
SFSWAP-202ENST00000535202 LCTP09848 1927 aa10.03□□□□□ -0.8
SFSWAP-202ENST00000535202 B4E1Z4 1266 aa10.03□□□□□ -0.8
SFSWAP-202ENST00000535202 ADAMTS4O75173 837 aa10.03□□□□□ -0.8
SFSWAP-202ENST00000535202 GSPT1P15170 499 aaKnown RBP10.03□□□□□ -0.8
SFSWAP-202ENST00000535202 IMMTQ16891 758 aaKnown RBP10.03□□□□□ -0.8
SFSWAP-202ENST00000535202 MUM1L1Q5H9M0 696 aa10.03□□□□□ -0.8
SFSWAP-202ENST00000535202 TTC22Q5TAA0 569 aa10.03□□□□□ -0.8
SFSWAP-202ENST00000535202 BTNL9Q6UXG8 535 aa10.03□□□□□ -0.8
SFSWAP-202ENST00000535202 NSMFQ6X4W1 530 aa10.03□□□□□ -0.8
SFSWAP-202ENST00000535202 TDHQ8IZJ6 230 aa10.03□□□□□ -0.8
SFSWAP-202ENST00000535202 FAM133AQ8N9E0 248 aa10.03□□□□□ -0.8
SFSWAP-202ENST00000535202 LRCH3Q96II8 777 aa10.03□□□□□ -0.8
SFSWAP-202ENST00000535202 TTC14Q96N46 770 aa10.03□□□□□ -0.8
SFSWAP-202ENST00000535202 DSCC1Q9BVC3 393 aa10.03□□□□□ -0.8
SFSWAP-202ENST00000535202 ABHD16BQ9H3Z7 469 aa10.03□□□□□ -0.8
SFSWAP-202ENST00000535202 RTN4Q9NQC3 1192 aaKnown RBP10.03□□□□□ -0.8
SFSWAP-202ENST00000535202 PHF24Q9UPV7 400 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms