RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 GOPCQ9HD26 462 aa19.61■□□□□ 0.73
CHMP4A-203ENST00000527154 ATP8A2Q9NTI2 1148 aa19.61■□□□□ 0.73
CHMP4A-203ENST00000527154 GNEQ9Y223 722 aaKnown RBP19.61■□□□□ 0.73
CHMP4A-203ENST00000527154 MYH8P13535 1937 aa19.61■□□□□ 0.73
CHMP4A-203ENST00000527154 MYOGP15173 224 aa19.6■□□□□ 0.73
CHMP4A-203ENST00000527154 SNRNP48Q6IEG0 339 aaKnown RBP19.6■□□□□ 0.73
CHMP4A-203ENST00000527154 ARMCX2Q7L311 632 aa19.6■□□□□ 0.73
CHMP4A-203ENST00000527154 KHSRPQ92945 711 aaKnown RBP eCLIP19.6■□□□□ 0.73
CHMP4A-203ENST00000527154 DDX11Q96FC9 970 aa19.6■□□□□ 0.73
CHMP4A-203ENST00000527154 AGBL1Q96MI9 1066 aa19.6■□□□□ 0.73
CHMP4A-203ENST00000527154 SLF1Q9BQI6 1058 aa19.6■□□□□ 0.73
CHMP4A-203ENST00000527154 SLC4A7Q9Y6M7 1214 aa19.6■□□□□ 0.73
CHMP4A-203ENST00000527154 SAMD1Q6SPF0 538 aaPredicted RBP19.59■□□□□ 0.73
CHMP4A-203ENST00000527154 LRRC37A2A6NM11 1700 aa19.59■□□□□ 0.73
CHMP4A-203ENST00000527154 MCM3APO60318 1980 aa19.59■□□□□ 0.73
CHMP4A-203ENST00000527154 APBB1O00213 710 aa19.58■□□□□ 0.72
CHMP4A-203ENST00000527154 PRKAB2O43741 272 aa19.58■□□□□ 0.72
CHMP4A-203ENST00000527154 ITGA7Q13683 1181 aa19.58■□□□□ 0.72
CHMP4A-203ENST00000527154 PRPF38AQ8NAV1 312 aaKnown RBP19.58■□□□□ 0.72
CHMP4A-203ENST00000527154 CLUAP1Q96AJ1 413 aa19.58■□□□□ 0.72
CHMP4A-203ENST00000527154 VTI1AQ96AJ9 217 aa19.58■□□□□ 0.72
CHMP4A-203ENST00000527154 SLC38A10Q9HBR0 1119 aa19.58■□□□□ 0.72
CHMP4A-203ENST00000527154 EPOPA6NHQ4 379 aa19.57■□□□□ 0.72
CHMP4A-203ENST00000527154 B4GALT4O60513 344 aa19.57■□□□□ 0.72
CHMP4A-203ENST00000527154 PFKMP08237 780 aa19.57■□□□□ 0.72
CHMP4A-203ENST00000527154 ATP2A2P16615 1042 aaKnown RBP19.57■□□□□ 0.72
CHMP4A-203ENST00000527154 CXCL17Q6UXB2 119 aa19.57■□□□□ 0.72
CHMP4A-203ENST00000527154 CCDC144CPQ8IYA2 1237 aa19.57■□□□□ 0.72
CHMP4A-203ENST00000527154 RPUSD2Q8IZ73 545 aaKnown RBP19.57■□□□□ 0.72
CHMP4A-203ENST00000527154 FAM133AQ8N9E0 248 aa19.57■□□□□ 0.72
CHMP4A-203ENST00000527154 CHST13Q8NET6 341 aa19.57■□□□□ 0.72
CHMP4A-203ENST00000527154 ARMT1Q9H993 441 aa19.57■□□□□ 0.72
CHMP4A-203ENST00000527154 CYP2D7A0A087X1C5 515 aa19.56■□□□□ 0.72
CHMP4A-203ENST00000527154 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.56■□□□□ 0.72
CHMP4A-203ENST00000527154 USP17L12C9JPN9 530 aa19.56■□□□□ 0.72
CHMP4A-203ENST00000527154 USP17L21D6R901 530 aa19.56■□□□□ 0.72
CHMP4A-203ENST00000527154 PI4K2BG5E9Z4 385 aa19.56■□□□□ 0.72
CHMP4A-203ENST00000527154 ADD2P35612 726 aa19.56■□□□□ 0.72
CHMP4A-203ENST00000527154 OAZ1P54368 228 aa19.56■□□□□ 0.72
CHMP4A-203ENST00000527154 CCL23P55773 120 aa19.56■□□□□ 0.72
CHMP4A-203ENST00000527154 BEX3Q00994 111 aa19.56■□□□□ 0.72
CHMP4A-203ENST00000527154 AACSQ86V21 672 aa19.56■□□□□ 0.72
CHMP4A-203ENST00000527154 NYAP2Q9P242 653 aa19.56■□□□□ 0.72
CHMP4A-203ENST00000527154 FBXO40Q9UH90 709 aa19.56■□□□□ 0.72
CHMP4A-203ENST00000527154 BAZ2AQ9UIF9 1905 aaKnown RBP19.55■□□□□ 0.72
CHMP4A-203ENST00000527154 CA3P07451 260 aa19.55■□□□□ 0.72
CHMP4A-203ENST00000527154 ERC1Q8IUD2 1116 aa19.55■□□□□ 0.72
CHMP4A-203ENST00000527154 MICALL1Q8N3F8 863 aa19.55■□□□□ 0.72
CHMP4A-203ENST00000527154 NUP88Q99567 741 aaPredicted RBP19.55■□□□□ 0.72
CHMP4A-203ENST00000527154 TRPV6Q9H1D0 765 aa19.55■□□□□ 0.72
CHMP4A-203ENST00000527154 C1orf115Q9H7X2 142 aa19.55■□□□□ 0.72
CHMP4A-203ENST00000527154 F5H6K3 240 aa19.54■□□□□ 0.72
CHMP4A-203ENST00000527154 RFXAPO00287 272 aa19.54■□□□□ 0.72
CHMP4A-203ENST00000527154 GTPBP6O43824 516 aaPredicted RBP19.54■□□□□ 0.72
CHMP4A-203ENST00000527154 LPXNO60711 386 aa19.54■□□□□ 0.72
CHMP4A-203ENST00000527154 NDUFB10O96000 172 aa19.54■□□□□ 0.72
CHMP4A-203ENST00000527154 TNFAIP2Q03169 654 aa19.54■□□□□ 0.72
CHMP4A-203ENST00000527154 KLRC3Q07444 240 aa19.54■□□□□ 0.72
CHMP4A-203ENST00000527154 TTLL4Q14679 1199 aa19.54■□□□□ 0.72
CHMP4A-203ENST00000527154 TMEM67Q5HYA8 995 aa19.54■□□□□ 0.72
CHMP4A-203ENST00000527154 PHOSPHO2Q8TCD6 241 aa19.54■□□□□ 0.72
CHMP4A-203ENST00000527154 SYNPO2Q9UMS6 1093 aa19.54■□□□□ 0.72
CHMP4A-203ENST00000527154 Q9Y3F1 56 aa19.54■□□□□ 0.72
CHMP4A-203ENST00000527154 BRWD1Q9NSI6 2320 aa19.54■□□□□ 0.72
CHMP4A-203ENST00000527154 IGKV6D-41A0A0C4DH26 115 aa19.53■□□□□ 0.72
CHMP4A-203ENST00000527154 ARHGEF15O94989 841 aa19.53■□□□□ 0.72
CHMP4A-203ENST00000527154 MBD4O95243 580 aa19.53■□□□□ 0.72
CHMP4A-203ENST00000527154 FSCN1Q16658 493 aaKnown RBP19.53■□□□□ 0.72
CHMP4A-203ENST00000527154 CEP85Q6P2H3 762 aa19.53■□□□□ 0.72
CHMP4A-203ENST00000527154 CTR9Q6PD62 1173 aa19.53■□□□□ 0.72
CHMP4A-203ENST00000527154 TLK2Q86UE8 772 aa19.53■□□□□ 0.72
CHMP4A-203ENST00000527154 ANKRD35Q8N283 1001 aa19.53■□□□□ 0.72
CHMP4A-203ENST00000527154 FRAT1Q92837 279 aaPredicted RBP19.53■□□□□ 0.72
CHMP4A-203ENST00000527154 HLA-CQ95604 372 aa19.53■□□□□ 0.72
CHMP4A-203ENST00000527154 ALDH8A1Q9H2A2 487 aaPredicted RBP19.53■□□□□ 0.72
CHMP4A-203ENST00000527154 CD320Q9NPF0 282 aa19.53■□□□□ 0.72
CHMP4A-203ENST00000527154 GOLIM4O00461 696 aa19.52■□□□□ 0.72
CHMP4A-203ENST00000527154 CNTN2Q02246 1040 aa19.52■□□□□ 0.72
CHMP4A-203ENST00000527154 TAP1Q03518 808 aa19.52■□□□□ 0.72
CHMP4A-203ENST00000527154 SKIV2LQ15477 1246 aaKnown RBP19.52■□□□□ 0.72
CHMP4A-203ENST00000527154 SLFNL1Q499Z3 407 aa19.52■□□□□ 0.72
CHMP4A-203ENST00000527154 ZKSCAN2Q63HK3 967 aa19.52■□□□□ 0.72
CHMP4A-203ENST00000527154 KRT40Q6A162 431 aa19.52■□□□□ 0.72
CHMP4A-203ENST00000527154 MKL1Q969V6 931 aa19.52■□□□□ 0.72
CHMP4A-203ENST00000527154 SCLYQ96I15 445 aa19.52■□□□□ 0.72
CHMP4A-203ENST00000527154 SLC9A7Q96T83 725 aa19.52■□□□□ 0.72
CHMP4A-203ENST00000527154 RAVER2Q9HCJ3 691 aaKnown RBP19.52■□□□□ 0.72
CHMP4A-203ENST00000527154 ZBED4O75132 1171 aa19.51■□□□□ 0.71
CHMP4A-203ENST00000527154 SMPD1P17405 629 aa19.51■□□□□ 0.71
CHMP4A-203ENST00000527154 CPXCR1Q8N123 301 aa19.51■□□□□ 0.71
CHMP4A-203ENST00000527154 EXOC6BQ9Y2D4 811 aa19.51■□□□□ 0.71
CHMP4A-203ENST00000527154 SOWAHBA6NEL2 793 aa19.5■□□□□ 0.71
CHMP4A-203ENST00000527154 PRR33A8MZF0 331 aa19.5■□□□□ 0.71
CHMP4A-203ENST00000527154 RASA1P20936 1047 aa19.5■□□□□ 0.71
CHMP4A-203ENST00000527154 UBE3CQ15386 1083 aa19.5■□□□□ 0.71
CHMP4A-203ENST00000527154 TAPT1Q6NXT6 567 aa19.5■□□□□ 0.71
CHMP4A-203ENST00000527154 RHPN1Q8TCX5 695 aa19.5■□□□□ 0.71
CHMP4A-203ENST00000527154 MORC4Q8TE76 937 aa19.5■□□□□ 0.71
CHMP4A-203ENST00000527154 ASB14A6NK59 587 aa19.49■□□□□ 0.71
CHMP4A-203ENST00000527154 ZBBXA8MT70 800 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms