RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 BMP8BP34820 402 aa11.16□□□□□ -0.62
SF3B2-204ENST00000525207 HAND2P61296 217 aa11.16□□□□□ -0.62
SF3B2-204ENST00000525207 IKQ13123 557 aaPredicted RBP11.16□□□□□ -0.62
SF3B2-204ENST00000525207 SNX17Q15036 470 aa11.16□□□□□ -0.62
SF3B2-204ENST00000525207 LRRC41Q15345 812 aa11.16□□□□□ -0.62
SF3B2-204ENST00000525207 RRP12Q5JTH9 1297 aaKnown RBP11.16□□□□□ -0.62
SF3B2-204ENST00000525207 MAMDC4Q6UXC1 1216 aa11.16□□□□□ -0.62
SF3B2-204ENST00000525207 KCTD1Q719H9 257 aa11.16□□□□□ -0.62
SF3B2-204ENST00000525207 ZNF467Q7Z7K2 595 aaPredicted RBP11.16□□□□□ -0.62
SF3B2-204ENST00000525207 ARRDC4Q8NCT1 418 aa11.16□□□□□ -0.62
SF3B2-204ENST00000525207 CHURC1Q8WUH1 139 aa11.16□□□□□ -0.62
SF3B2-204ENST00000525207 DCAF4Q8WV16 495 aa11.16□□□□□ -0.62
SF3B2-204ENST00000525207 DDX11Q96FC9 970 aa11.16□□□□□ -0.62
SF3B2-204ENST00000525207 ACAD9Q9H845 621 aa11.16□□□□□ -0.62
SF3B2-204ENST00000525207 XPNPEP3Q9NQH7 507 aa11.16□□□□□ -0.62
SF3B2-204ENST00000525207 HOMER2Q9NSB8 354 aa11.16□□□□□ -0.62
SF3B2-204ENST00000525207 DIAPH3Q9NSV4 1193 aa11.16□□□□□ -0.62
SF3B2-204ENST00000525207 CNPY2Q9Y2B0 182 aa11.16□□□□□ -0.62
SF3B2-204ENST00000525207 SUPT16HQ9Y5B9 1047 aaKnown RBP11.16□□□□□ -0.62
SF3B2-204ENST00000525207 HIP1O00291 1037 aa11.15□□□□□ -0.62
SF3B2-204ENST00000525207 SLC4A3P48751 1232 aa11.15□□□□□ -0.62
SF3B2-204ENST00000525207 ATN1P54259 1190 aaPredicted RBP11.15□□□□□ -0.62
SF3B2-204ENST00000525207 RTP1P59025 263 aa11.15□□□□□ -0.62
SF3B2-204ENST00000525207 CCDC96Q2M329 555 aa11.15□□□□□ -0.62
SF3B2-204ENST00000525207 AKNAD1Q5T1N1 836 aa11.15□□□□□ -0.62
SF3B2-204ENST00000525207 CWC27Q6UX04 472 aaKnown RBP11.15□□□□□ -0.62
SF3B2-204ENST00000525207 ANKRD35Q8N283 1001 aa11.15□□□□□ -0.62
SF3B2-204ENST00000525207 LENG1Q96BZ8 264 aaPredicted RBP11.15□□□□□ -0.62
SF3B2-204ENST00000525207 RNF146Q9NTX7 359 aa11.15□□□□□ -0.62
SF3B2-204ENST00000525207 TCP11L1Q9NUJ3 509 aa11.15□□□□□ -0.62
SF3B2-204ENST00000525207 PRR12Q9ULL5 1215 aa11.15□□□□□ -0.62
SF3B2-204ENST00000525207 DNAH12Q6ZR08 3092 aa11.15□□□□□ -0.63
SF3B2-204ENST00000525207 SYNRGQ9UMZ2 1314 aa11.14□□□□□ -0.63
SF3B2-204ENST00000525207 MYH6P13533 1939 aa11.14□□□□□ -0.63
SF3B2-204ENST00000525207 ADAMTS4O75173 837 aa11.14□□□□□ -0.63
SF3B2-204ENST00000525207 SNAI1O95863 264 aaPredicted RBP11.14□□□□□ -0.63
SF3B2-204ENST00000525207 PDHBP11177 359 aa11.14□□□□□ -0.63
SF3B2-204ENST00000525207 TOP1P11387 765 aaKnown RBP11.14□□□□□ -0.63
SF3B2-204ENST00000525207 GSPT1P15170 499 aaKnown RBP11.14□□□□□ -0.63
SF3B2-204ENST00000525207 PDE4AP27815 886 aa11.14□□□□□ -0.63
SF3B2-204ENST00000525207 TKFCQ3LXA3 575 aa11.14□□□□□ -0.63
SF3B2-204ENST00000525207 RCSD1Q6JBY9 416 aa11.14□□□□□ -0.63
SF3B2-204ENST00000525207 ARMCX2Q7L311 632 aa11.14□□□□□ -0.63
SF3B2-204ENST00000525207 FAM133AQ8N9E0 248 aa11.14□□□□□ -0.63
SF3B2-204ENST00000525207 CHMP4CQ96CF2 233 aa11.14□□□□□ -0.63
SF3B2-204ENST00000525207 AGBL1Q96MI9 1066 aa11.14□□□□□ -0.63
SF3B2-204ENST00000525207 TMEM47Q9BQJ4 181 aa11.14□□□□□ -0.63
SF3B2-204ENST00000525207 DSCC1Q9BVC3 393 aa11.14□□□□□ -0.63
SF3B2-204ENST00000525207 RANBP17Q9H2T7 1088 aaKnown RBP11.14□□□□□ -0.63
SF3B2-204ENST00000525207 RNF41Q9H4P4 317 aaPredicted RBP11.14□□□□□ -0.63
SF3B2-204ENST00000525207 A1CFQ9NQ94 594 aaKnown RBP11.14□□□□□ -0.63
SF3B2-204ENST00000525207 ZHX1Q9UKY1 873 aaPredicted RBP11.14□□□□□ -0.63
SF3B2-204ENST00000525207 PHF24Q9UPV7 400 aa11.14□□□□□ -0.63
SF3B2-204ENST00000525207 MTMR7Q9Y216 660 aa11.14□□□□□ -0.63
SF3B2-204ENST00000525207 FRMPD2Q68DX3 1309 aaPredicted RBP11.13□□□□□ -0.63
SF3B2-204ENST00000525207 SOX1O00570 391 aaPredicted RBP11.13□□□□□ -0.63
SF3B2-204ENST00000525207 PGK1P00558 417 aa11.13□□□□□ -0.63
SF3B2-204ENST00000525207 ICAM1P05362 532 aa11.13□□□□□ -0.63
SF3B2-204ENST00000525207 NT5C2P49902 561 aa11.13□□□□□ -0.63
SF3B2-204ENST00000525207 TRIM60Q495X7 471 aa11.13□□□□□ -0.63
SF3B2-204ENST00000525207 C1orf53Q5VUE5 145 aa11.13□□□□□ -0.63
SF3B2-204ENST00000525207 CCDC174Q6PII3 467 aa11.13□□□□□ -0.63
SF3B2-204ENST00000525207 BTNL9Q6UXG8 535 aa11.13□□□□□ -0.63
SF3B2-204ENST00000525207 SLC39A5Q6ZMH5 540 aa11.13□□□□□ -0.63
SF3B2-204ENST00000525207 MFSD6Q6ZSS7 791 aa11.13□□□□□ -0.63
SF3B2-204ENST00000525207 RNF180Q86T96 592 aa11.13□□□□□ -0.63
SF3B2-204ENST00000525207 TDHQ8IZJ6 230 aa11.13□□□□□ -0.63
SF3B2-204ENST00000525207 ESR2Q92731 530 aa11.13□□□□□ -0.63
SF3B2-204ENST00000525207 IL25Q9H293 177 aa11.13□□□□□ -0.63
SF3B2-204ENST00000525207 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.13□□□□□ -0.63
SF3B2-204ENST00000525207 ATP11BQ9Y2G3 1177 aa11.13□□□□□ -0.63
SF3B2-204ENST00000525207 ASTN1O14525 1302 aa11.12□□□□□ -0.63
SF3B2-204ENST00000525207 RAD50Q92878 1312 aa11.12□□□□□ -0.63
SF3B2-204ENST00000525207 A0A1W2PQ45 241 aaPredicted RBP11.12□□□□□ -0.63
SF3B2-204ENST00000525207 A0A1W2PQY0 241 aa11.12□□□□□ -0.63
SF3B2-204ENST00000525207 POTEB2H3BUK9 544 aa11.12□□□□□ -0.63
SF3B2-204ENST00000525207 ADCY6O43306 1168 aa11.12□□□□□ -0.63
SF3B2-204ENST00000525207 SNHG28P0DPA3 235 aa11.12□□□□□ -0.63
SF3B2-204ENST00000525207 ALAS1P13196 640 aa11.12□□□□□ -0.63
SF3B2-204ENST00000525207 CST5P28325 142 aaPredicted RBP11.12□□□□□ -0.63
SF3B2-204ENST00000525207 ADCYAP1R1P41586 468 aa11.12□□□□□ -0.63
SF3B2-204ENST00000525207 SNAP25P60880 206 aa11.12□□□□□ -0.63
SF3B2-204ENST00000525207 CNTN2Q02246 1040 aa11.12□□□□□ -0.63
SF3B2-204ENST00000525207 ACVR2BQ13705 512 aa11.12□□□□□ -0.63
SF3B2-204ENST00000525207 MUM1L1Q5H9M0 696 aa11.12□□□□□ -0.63
SF3B2-204ENST00000525207 TTC22Q5TAA0 569 aa11.12□□□□□ -0.63
SF3B2-204ENST00000525207 SYDE2Q5VT97 1194 aa11.12□□□□□ -0.63
SF3B2-204ENST00000525207 TTBK2Q6IQ55 1244 aa11.12□□□□□ -0.63
SF3B2-204ENST00000525207 CCDC144CPQ8IYA2 1237 aa11.12□□□□□ -0.63
SF3B2-204ENST00000525207 TRERF1Q96PN7 1200 aa11.12□□□□□ -0.63
SF3B2-204ENST00000525207 UBE2OQ9C0C9 1292 aaKnown RBP11.12□□□□□ -0.63
SF3B2-204ENST00000525207 KATNBL1Q9H079 304 aa11.12□□□□□ -0.63
SF3B2-204ENST00000525207 ABHD16BQ9H3Z7 469 aa11.12□□□□□ -0.63
SF3B2-204ENST00000525207 PDLIM7Q9NR12 457 aa11.12□□□□□ -0.63
SF3B2-204ENST00000525207 FAM184BQ9ULE4 1060 aa11.12□□□□□ -0.63
SF3B2-204ENST00000525207 CCPG1Q9ULG6 757 aa11.12□□□□□ -0.63
SF3B2-204ENST00000525207 ZNF213O14771 459 aa11.11□□□□□ -0.63
SF3B2-204ENST00000525207 DUSP11O75319 330 aaKnown RBP11.11□□□□□ -0.63
SF3B2-204ENST00000525207 SLC16A2P36021 539 aa11.11□□□□□ -0.63
SF3B2-204ENST00000525207 IRX6P78412 446 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms