RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 ANO1Q5XXA6 986 aa12.84□□□□□ -0.35
PVT1-216ENST00000523068 MAMDC4Q6UXC1 1216 aa12.84□□□□□ -0.35
PVT1-216ENST00000523068 ESR2Q92731 530 aa12.84□□□□□ -0.35
PVT1-216ENST00000523068 PRO3102Q9H379 93 aa12.84□□□□□ -0.35
PVT1-216ENST00000523068 ACAD9Q9H845 621 aa12.84□□□□□ -0.35
PVT1-216ENST00000523068 ZMYND8Q9ULU4 1186 aaPredicted RBP12.84□□□□□ -0.35
PVT1-216ENST00000523068 TACC3Q9Y6A5 838 aa12.84□□□□□ -0.35
PVT1-216ENST00000523068 AKR1A1P14550 325 aa12.83□□□□□ -0.36
PVT1-216ENST00000523068 BMP8BP34820 402 aa12.83□□□□□ -0.36
PVT1-216ENST00000523068 CCDC178Q5BJE1 867 aa12.83□□□□□ -0.36
PVT1-216ENST00000523068 GJC2Q5T442 439 aaPredicted RBP12.83□□□□□ -0.36
PVT1-216ENST00000523068 CHMP4CQ96CF2 233 aa12.83□□□□□ -0.36
PVT1-216ENST00000523068 TMEM47Q9BQJ4 181 aa12.83□□□□□ -0.36
PVT1-216ENST00000523068 DSCC1Q9BVC3 393 aa12.83□□□□□ -0.36
PVT1-216ENST00000523068 XPNPEP3Q9NQH7 507 aa12.83□□□□□ -0.36
PVT1-216ENST00000523068 HOMER2Q9NSB8 354 aa12.83□□□□□ -0.36
PVT1-216ENST00000523068 PCDH10Q9P2E7 1040 aa12.83□□□□□ -0.36
PVT1-216ENST00000523068 CTNNA3Q9UI47 895 aa12.83□□□□□ -0.36
PVT1-216ENST00000523068 PRR12Q9ULL5 1215 aa12.83□□□□□ -0.36
PVT1-216ENST00000523068 MTMR7Q9Y216 660 aa12.83□□□□□ -0.36
PVT1-216ENST00000523068 DNAH12Q6ZR08 3092 aa12.83□□□□□ -0.36
PVT1-216ENST00000523068 ZNF536O15090 1300 aa12.83□□□□□ -0.36
PVT1-216ENST00000523068 MYCNP04198 464 aaPredicted RBP12.82□□□□□ -0.36
PVT1-216ENST00000523068 ZNF865P0CJ78 1059 aaPredicted RBP12.82□□□□□ -0.36
PVT1-216ENST00000523068 ALAS1P13196 640 aa12.82□□□□□ -0.36
PVT1-216ENST00000523068 SYN1P17600 705 aa12.82□□□□□ -0.36
PVT1-216ENST00000523068 LRRC41Q15345 812 aa12.82□□□□□ -0.36
PVT1-216ENST00000523068 IMMTQ16891 758 aaKnown RBP12.82□□□□□ -0.36
PVT1-216ENST00000523068 RNF180Q86T96 592 aa12.82□□□□□ -0.36
PVT1-216ENST00000523068 IQCA1Q86XH1 822 aa12.82□□□□□ -0.36
PVT1-216ENST00000523068 AGBL1Q96MI9 1066 aa12.82□□□□□ -0.36
PVT1-216ENST00000523068 TRERF1Q96PN7 1200 aa12.82□□□□□ -0.36
PVT1-216ENST00000523068 GDF15Q99988 308 aa12.82□□□□□ -0.36
PVT1-216ENST00000523068 ABHD16BQ9H3Z7 469 aa12.82□□□□□ -0.36
PVT1-216ENST00000523068 RNF146Q9NTX7 359 aa12.82□□□□□ -0.36
PVT1-216ENST00000523068 PNMA2Q9UL42 364 aa12.82□□□□□ -0.36
PVT1-216ENST00000523068 FAM184BQ9ULE4 1060 aa12.82□□□□□ -0.36
PVT1-216ENST00000523068 POTEB2H3BUK9 544 aa12.81□□□□□ -0.36
PVT1-216ENST00000523068 TAL1P17542 331 aaPredicted RBP12.81□□□□□ -0.36
PVT1-216ENST00000523068 ATN1P54259 1190 aaPredicted RBP12.81□□□□□ -0.36
PVT1-216ENST00000523068 TTC22Q5TAA0 569 aa12.81□□□□□ -0.36
PVT1-216ENST00000523068 CCDC174Q6PII3 467 aa12.81□□□□□ -0.36
PVT1-216ENST00000523068 BTNL9Q6UXG8 535 aa12.81□□□□□ -0.36
PVT1-216ENST00000523068 SLC39A5Q6ZMH5 540 aa12.81□□□□□ -0.36
PVT1-216ENST00000523068 DGKHQ86XP1 1220 aa12.81□□□□□ -0.36
PVT1-216ENST00000523068 TBC1D10CQ8IV04 446 aa12.81□□□□□ -0.36
PVT1-216ENST00000523068 RANBP17Q9H2T7 1088 aaKnown RBP12.81□□□□□ -0.36
PVT1-216ENST00000523068 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.81□□□□□ -0.36
PVT1-216ENST00000523068 PRKAG2Q9UGJ0 569 aa12.81□□□□□ -0.36
PVT1-216ENST00000523068 ZHX1Q9UKY1 873 aaPredicted RBP12.81□□□□□ -0.36
PVT1-216ENST00000523068 CCPG1Q9ULG6 757 aa12.81□□□□□ -0.36
PVT1-216ENST00000523068 MYH6P13533 1939 aa12.81□□□□□ -0.36
PVT1-216ENST00000523068 NEDD4P46934 1319 aa12.81□□□□□ -0.36
PVT1-216ENST00000523068 SNAI1O95863 264 aaPredicted RBP12.8□□□□□ -0.36
PVT1-216ENST00000523068 ICAM1P05362 532 aa12.8□□□□□ -0.36
PVT1-216ENST00000523068 PDHBP11177 359 aa12.8□□□□□ -0.36
PVT1-216ENST00000523068 PDE4AP27815 886 aa12.8□□□□□ -0.36
PVT1-216ENST00000523068 MAGEA10P43363 369 aaPredicted RBP12.8□□□□□ -0.36
PVT1-216ENST00000523068 RTP1P59025 263 aa12.8□□□□□ -0.36
PVT1-216ENST00000523068 ACVR2BQ13705 512 aa12.8□□□□□ -0.36
PVT1-216ENST00000523068 SYDE2Q5VT97 1194 aa12.8□□□□□ -0.36
PVT1-216ENST00000523068 ARMCX2Q7L311 632 aa12.8□□□□□ -0.36
PVT1-216ENST00000523068 FAM133AQ8N9E0 248 aa12.8□□□□□ -0.36
PVT1-216ENST00000523068 RUFY2Q8WXA3 655 aa12.8□□□□□ -0.36
PVT1-216ENST00000523068 KRT23Q9C075 422 aa12.8□□□□□ -0.36
PVT1-216ENST00000523068 CNNM2Q9H8M5 875 aa12.8□□□□□ -0.36
PVT1-216ENST00000523068 A1CFQ9NQ94 594 aaKnown RBP12.8□□□□□ -0.36
PVT1-216ENST00000523068 TRIOBPQ9H2D6 2365 aa12.8□□□□□ -0.36
PVT1-216ENST00000523068 RAD50Q92878 1312 aa12.8□□□□□ -0.36
PVT1-216ENST00000523068 LCTP09848 1927 aa12.8□□□□□ -0.36
PVT1-216ENST00000523068 LTBP2Q14767 1821 aa12.79□□□□□ -0.36
PVT1-216ENST00000523068 ASB14A6NK59 587 aa12.79□□□□□ -0.36
PVT1-216ENST00000523068 KDM4AO75164 1064 aa12.79□□□□□ -0.36
PVT1-216ENST00000523068 DUSP11O75319 330 aaKnown RBP12.79□□□□□ -0.36
PVT1-216ENST00000523068 PGK1P00558 417 aa12.79□□□□□ -0.36
PVT1-216ENST00000523068 SNHG28P0DPA3 235 aa12.79□□□□□ -0.36
PVT1-216ENST00000523068 GSPT1P15170 499 aaKnown RBP12.79□□□□□ -0.36
PVT1-216ENST00000523068 SLC16A2P36021 539 aa12.79□□□□□ -0.36
PVT1-216ENST00000523068 ADCYAP1R1P41586 468 aa12.79□□□□□ -0.36
PVT1-216ENST00000523068 SNX17Q15036 470 aa12.79□□□□□ -0.36
PVT1-216ENST00000523068 GPATCH4Q5T3I0 446 aaKnown RBP12.79□□□□□ -0.36
PVT1-216ENST00000523068 C1orf53Q5VUE5 145 aa12.79□□□□□ -0.36
PVT1-216ENST00000523068 TTBK2Q6IQ55 1244 aa12.79□□□□□ -0.36
PVT1-216ENST00000523068 RASGRP2Q7LDG7 609 aa12.79□□□□□ -0.36
PVT1-216ENST00000523068 CCDC144CPQ8IYA2 1237 aa12.79□□□□□ -0.36
PVT1-216ENST00000523068 LBHD1Q9BQE6 289 aaPredicted RBP12.79□□□□□ -0.36
PVT1-216ENST00000523068 ZKSCAN3Q9BRR0 538 aa12.79□□□□□ -0.36
PVT1-216ENST00000523068 TSEN34Q9BSV6 310 aaKnown RBP12.79□□□□□ -0.36
PVT1-216ENST00000523068 UBE2OQ9C0C9 1292 aaKnown RBP12.79□□□□□ -0.36
PVT1-216ENST00000523068 SPC25Q9HBM1 224 aa12.79□□□□□ -0.36
PVT1-216ENST00000523068 GPCPD1Q9NPB8 672 aa12.79□□□□□ -0.36
PVT1-216ENST00000523068 PHF24Q9UPV7 400 aa12.79□□□□□ -0.36
PVT1-216ENST00000523068 ATP11BQ9Y2G3 1177 aa12.79□□□□□ -0.36
PVT1-216ENST00000523068 FRMPD2Q68DX3 1309 aaPredicted RBP12.79□□□□□ -0.36
PVT1-216ENST00000523068 LRRC37A2A6NM11 1700 aa12.79□□□□□ -0.36
PVT1-216ENST00000523068 RANBP2P49792 3224 aaKnown RBP12.78□□□□□ -0.36
PVT1-216ENST00000523068 B4E1Z4 1266 aa12.78□□□□□ -0.36
PVT1-216ENST00000523068 ADAMTS4O75173 837 aa12.78□□□□□ -0.36
PVT1-216ENST00000523068 SNAP25P60880 206 aa12.78□□□□□ -0.36
PVT1-216ENST00000523068 CNTN2Q02246 1040 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms