RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 NT5C2P49902 561 aa17.91■□□□□ 0.46
PCDHA3-201ENST00000522353 KCNQ4P56696 695 aa17.91■□□□□ 0.46
PCDHA3-201ENST00000522353 IGBP1P78318 339 aa17.91■□□□□ 0.46
PCDHA3-201ENST00000522353 NUB1Q9Y5A7 615 aa17.91■□□□□ 0.46
PCDHA3-201ENST00000522353 CCDC110Q8TBZ0 833 aa17.9■□□□□ 0.46
PCDHA3-201ENST00000522353 WDR11Q9BZH6 1224 aa17.9■□□□□ 0.46
PCDHA3-201ENST00000522353 FAM207AQ9NSI2 230 aaPredicted RBP17.9■□□□□ 0.46
PCDHA3-201ENST00000522353 PANK4Q9NVE7 773 aa17.9■□□□□ 0.46
PCDHA3-201ENST00000522353 LONP1P36776 959 aaKnown RBP17.9■□□□□ 0.46
PCDHA3-201ENST00000522353 ZNF75DP51815 510 aa17.9■□□□□ 0.46
PCDHA3-201ENST00000522353 LRCH2Q5VUJ6 765 aa17.9■□□□□ 0.46
PCDHA3-201ENST00000522353 SND1Q7KZF4 910 aaKnown RBP eCLIP17.9■□□□□ 0.46
PCDHA3-201ENST00000522353 PEX26Q7Z412 305 aa17.9■□□□□ 0.46
PCDHA3-201ENST00000522353 AFAP1L2Q8N4X5 818 aa17.9■□□□□ 0.46
PCDHA3-201ENST00000522353 MAGEF1Q9HAY2 307 aa17.9■□□□□ 0.46
PCDHA3-201ENST00000522353 CBX8Q9HC52 389 aa17.9■□□□□ 0.46
PCDHA3-201ENST00000522353 LAD1O00515 517 aa17.9■□□□□ 0.46
PCDHA3-201ENST00000522353 CEP104O60308 925 aa17.9■□□□□ 0.46
PCDHA3-201ENST00000522353 RBSNQ9H1K0 784 aa17.9■□□□□ 0.46
PCDHA3-201ENST00000522353 GCFC2P16383 781 aaKnown RBP17.9■□□□□ 0.46
PCDHA3-201ENST00000522353 TRAPPC10P48553 1259 aa17.9■□□□□ 0.46
PCDHA3-201ENST00000522353 LRMPQ12912 555 aa17.9■□□□□ 0.46
PCDHA3-201ENST00000522353 RPS6KA1Q15418 735 aa17.9■□□□□ 0.46
PCDHA3-201ENST00000522353 FAM26FQ5R3K3 315 aa17.9■□□□□ 0.46
PCDHA3-201ENST00000522353 RRAGAQ7L523 313 aa17.9■□□□□ 0.46
PCDHA3-201ENST00000522353 SRGAP1Q7Z6B7 1085 aa17.9■□□□□ 0.46
PCDHA3-201ENST00000522353 FOXP4Q8IVH2 680 aaPredicted RBP17.9■□□□□ 0.46
PCDHA3-201ENST00000522353 RNF26Q9BY78 433 aaPredicted RBP17.9■□□□□ 0.46
PCDHA3-201ENST00000522353 ZNF277Q9NRM2 450 aaPredicted RBP17.9■□□□□ 0.46
PCDHA3-201ENST00000522353 PDZD4Q76G19 769 aaPredicted RBP17.89■□□□□ 0.46
PCDHA3-201ENST00000522353 SLC10A4Q96EP9 437 aa17.89■□□□□ 0.46
PCDHA3-201ENST00000522353 PNMA3Q9UL41 463 aa17.89■□□□□ 0.46
PCDHA3-201ENST00000522353 FAM184BQ9ULE4 1060 aa17.89■□□□□ 0.46
PCDHA3-201ENST00000522353 TTLL3Q9Y4R7 772 aa17.89■□□□□ 0.46
PCDHA3-201ENST00000522353 POLR2BP30876 1174 aaKnown RBP17.89■□□□□ 0.45
PCDHA3-201ENST00000522353 GBP6Q6ZN66 633 aa17.89■□□□□ 0.45
PCDHA3-201ENST00000522353 NLRC4Q9NPP4 1024 aa17.89■□□□□ 0.45
PCDHA3-201ENST00000522353 ADRA2BP18089 450 aa17.89■□□□□ 0.45
PCDHA3-201ENST00000522353 TRIML1Q8N9V2 468 aa17.89■□□□□ 0.45
PCDHA3-201ENST00000522353 SRP68Q9UHB9 627 aaKnown RBP17.89■□□□□ 0.45
PCDHA3-201ENST00000522353 ARAP3Q8WWN8 1544 aa17.89■□□□□ 0.45
PCDHA3-201ENST00000522353 BTBD18B2RXH4 712 aa17.89■□□□□ 0.45
PCDHA3-201ENST00000522353 SORBS3O60504 671 aa17.89■□□□□ 0.45
PCDHA3-201ENST00000522353 PLEKHF1Q96S99 279 aa17.89■□□□□ 0.45
PCDHA3-201ENST00000522353 BSDC1Q9NW68 430 aaPredicted RBP17.89■□□□□ 0.45
PCDHA3-201ENST00000522353 MYO1AQ9UBC5 1043 aa17.89■□□□□ 0.45
PCDHA3-201ENST00000522353 STAP2Q9UGK3 403 aa17.89■□□□□ 0.45
PCDHA3-201ENST00000522353 AFF2P51816 1311 aa17.89■□□□□ 0.45
PCDHA3-201ENST00000522353 ADCY9O60503 1353 aa17.89■□□□□ 0.45
PCDHA3-201ENST00000522353 CLASP1Q7Z460 1538 aa17.88■□□□□ 0.45
PCDHA3-201ENST00000522353 GOLGA6CA6NDK9 693 aa17.88■□□□□ 0.45
PCDHA3-201ENST00000522353 GOLGA6BA6NDN3 693 aa17.88■□□□□ 0.45
PCDHA3-201ENST00000522353 GOLGA6DP0CG33 693 aa17.88■□□□□ 0.45
PCDHA3-201ENST00000522353 PFKFB1P16118 471 aa17.88■□□□□ 0.45
PCDHA3-201ENST00000522353 ZNF526Q8TF50 670 aaPredicted RBP17.88■□□□□ 0.45
PCDHA3-201ENST00000522353 GOLGA6AQ9NYA3 693 aa17.88■□□□□ 0.45
PCDHA3-201ENST00000522353 GTPBP6O43824 516 aaPredicted RBP17.88■□□□□ 0.45
PCDHA3-201ENST00000522353 ABL1P00519 1130 aa17.88■□□□□ 0.45
PCDHA3-201ENST00000522353 STAT2P52630 851 aa17.88■□□□□ 0.45
PCDHA3-201ENST00000522353 ZNF445P59923 1031 aa17.88■□□□□ 0.45
PCDHA3-201ENST00000522353 HADHQ16836 314 aaKnown RBP17.88■□□□□ 0.45
PCDHA3-201ENST00000522353 CCDC51Q96ER9 411 aa17.88■□□□□ 0.45
PCDHA3-201ENST00000522353 PPP2R5DQ14738 602 aa17.88■□□□□ 0.45
PCDHA3-201ENST00000522353 FAM160B2Q86V87 743 aa17.88■□□□□ 0.45
PCDHA3-201ENST00000522353 SOS2Q07890 1332 aaPredicted RBP17.88■□□□□ 0.45
PCDHA3-201ENST00000522353 TLR3O15455 904 aaKnown RBP17.88■□□□□ 0.45
PCDHA3-201ENST00000522353 GDF11O95390 407 aa17.88■□□□□ 0.45
PCDHA3-201ENST00000522353 IFT20Q8IY31 132 aa17.88■□□□□ 0.45
PCDHA3-201ENST00000522353 CCDC89Q8N998 374 aa17.88■□□□□ 0.45
PCDHA3-201ENST00000522353 ADGBQ8N7X0 1667 aa17.88■□□□□ 0.45
PCDHA3-201ENST00000522353 ADD2P35612 726 aa17.87■□□□□ 0.45
PCDHA3-201ENST00000522353 ZNF577Q9BSK1 485 aa17.87■□□□□ 0.45
PCDHA3-201ENST00000522353 LSM14BQ9BX40 385 aaKnown RBP17.87■□□□□ 0.45
PCDHA3-201ENST00000522353 SAMD9LQ8IVG5 1584 aa17.87■□□□□ 0.45
PCDHA3-201ENST00000522353 PRR36Q9H6K5 1346 aa17.87■□□□□ 0.45
PCDHA3-201ENST00000522353 CYP4A11Q02928 519 aa17.87■□□□□ 0.45
PCDHA3-201ENST00000522353 NACC1Q96RE7 527 aa17.87■□□□□ 0.45
PCDHA3-201ENST00000522353 PFDN4Q9NQP4 134 aa17.87■□□□□ 0.45
PCDHA3-201ENST00000522353 PALD1Q9ULE6 856 aa17.87■□□□□ 0.45
PCDHA3-201ENST00000522353 ABCA8O94911 1581 aa17.87■□□□□ 0.45
PCDHA3-201ENST00000522353 CMA1P23946 247 aa17.87■□□□□ 0.45
PCDHA3-201ENST00000522353 RBM6P78332 1123 aaKnown RBP17.87■□□□□ 0.45
PCDHA3-201ENST00000522353 ODR4Q5SWX8 454 aa17.87■□□□□ 0.45
PCDHA3-201ENST00000522353 CASC4Q6P4E1 433 aa17.87■□□□□ 0.45
PCDHA3-201ENST00000522353 DAAM2Q86T65 1068 aa17.87■□□□□ 0.45
PCDHA3-201ENST00000522353 TRIM50Q86XT4 487 aa17.87■□□□□ 0.45
PCDHA3-201ENST00000522353 MYO3BQ8WXR4 1341 aa17.87■□□□□ 0.45
PCDHA3-201ENST00000522353 OATP04181 439 aa17.87■□□□□ 0.45
PCDHA3-201ENST00000522353 RNASE9P60153 205 aaKnown RBP17.87■□□□□ 0.45
PCDHA3-201ENST00000522353 IRX5P78411 483 aaPredicted RBP17.87■□□□□ 0.45
PCDHA3-201ENST00000522353 MIS18BP1Q6P0N0 1132 aa17.87■□□□□ 0.45
PCDHA3-201ENST00000522353 CCDC105Q8IYK2 499 aa17.87■□□□□ 0.45
PCDHA3-201ENST00000522353 CUEDC2Q9H467 287 aa17.87■□□□□ 0.45
PCDHA3-201ENST00000522353 SEPT9Q9UHD8 586 aaPredicted RBP17.87■□□□□ 0.45
PCDHA3-201ENST00000522353 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.86■□□□□ 0.45
PCDHA3-201ENST00000522353 USP17L8P0C7I0 530 aa17.86■□□□□ 0.45
PCDHA3-201ENST00000522353 ABCD1P33897 745 aa17.86■□□□□ 0.45
PCDHA3-201ENST00000522353 PNOCQ13519 176 aa17.86■□□□□ 0.45
PCDHA3-201ENST00000522353 TRMT44Q8IYL2 757 aaKnown RBP17.86■□□□□ 0.45
PCDHA3-201ENST00000522353 PPANQ9NQ55 473 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms