RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 PTGDRQ13258 359 aa14.68□□□□□ -0.06
PVT1-203ENST00000513868 NBPF12Q5TAG4 269 aaPredicted RBP14.68□□□□□ -0.06
PVT1-203ENST00000513868 ANGEL2Q5VTE6 544 aaKnown RBP14.68□□□□□ -0.06
PVT1-203ENST00000513868 C4orf32Q8N8J7 132 aa14.68□□□□□ -0.06
PVT1-203ENST00000513868 GLIS2Q9BZE0 524 aaPredicted RBP14.68□□□□□ -0.06
PVT1-203ENST00000513868 CCDC194A0A1B0GVG4 234 aa14.68□□□□□ -0.06
PVT1-203ENST00000513868 ASNSP08243 561 aa14.68□□□□□ -0.06
PVT1-203ENST00000513868 QRICH1Q2TAL8 776 aa14.68□□□□□ -0.06
PVT1-203ENST00000513868 SPECC1Q5M775 1068 aa14.68□□□□□ -0.06
PVT1-203ENST00000513868 PPP1R18Q6NYC8 613 aa14.68□□□□□ -0.06
PVT1-203ENST00000513868 TMEM232C9JQI7 657 aa14.67□□□□□ -0.06
PVT1-203ENST00000513868 DDNO94850 711 aaPredicted RBP14.67□□□□□ -0.06
PVT1-203ENST00000513868 CCDC192P0DO97 292 aa14.67□□□□□ -0.06
PVT1-203ENST00000513868 SYKP43405 635 aa14.67□□□□□ -0.06
PVT1-203ENST00000513868 TYRO3Q06418 890 aa14.67□□□□□ -0.06
PVT1-203ENST00000513868 CDC37Q16543 378 aaPredicted RBP14.67□□□□□ -0.06
PVT1-203ENST00000513868 IL17AQ16552 155 aa14.67□□□□□ -0.06
PVT1-203ENST00000513868 INF2Q27J81 1249 aa14.67□□□□□ -0.06
PVT1-203ENST00000513868 KRT25Q7Z3Z0 450 aa14.67□□□□□ -0.06
PVT1-203ENST00000513868 CCDC84Q86UT8 332 aaPredicted RBP14.67□□□□□ -0.06
PVT1-203ENST00000513868 SPICE1Q8N0Z3 855 aa14.67□□□□□ -0.06
PVT1-203ENST00000513868 RNF214Q8ND24 703 aa14.67□□□□□ -0.06
PVT1-203ENST00000513868 TIGD1Q96MW7 591 aa14.67□□□□□ -0.06
PVT1-203ENST00000513868 CSRNP2Q9H175 543 aa14.67□□□□□ -0.06
PVT1-203ENST00000513868 MCM7P33993 719 aa14.66□□□□□ -0.06
PVT1-203ENST00000513868 CLK2P49760 499 aaKnown RBP14.66□□□□□ -0.06
PVT1-203ENST00000513868 ADCY7P51828 1080 aa14.66□□□□□ -0.06
PVT1-203ENST00000513868 SYDE2Q5VT97 1194 aa14.66□□□□□ -0.06
PVT1-203ENST00000513868 USP49Q70CQ1 688 aa14.66□□□□□ -0.06
PVT1-203ENST00000513868 APOBEC3FQ8IUX4 373 aaKnown RBP14.66□□□□□ -0.06
PVT1-203ENST00000513868 REXO1Q8N1G1 1221 aaKnown RBP14.66□□□□□ -0.06
PVT1-203ENST00000513868 FERMT2Q96AC1 680 aa14.66□□□□□ -0.06
PVT1-203ENST00000513868 VCPKMTQ9H867 229 aa14.66□□□□□ -0.06
PVT1-203ENST00000513868 GOPCQ9HD26 462 aa14.66□□□□□ -0.06
PVT1-203ENST00000513868 RIC8AQ9NPQ8 531 aa14.66□□□□□ -0.06
PVT1-203ENST00000513868 TMEM260Q9NX78 707 aa14.66□□□□□ -0.06
PVT1-203ENST00000513868 RNF181Q9P0P0 153 aa14.66□□□□□ -0.06
PVT1-203ENST00000513868 BIN2Q9UBW5 565 aaPredicted RBP14.66□□□□□ -0.06
PVT1-203ENST00000513868 KCNH3Q9ULD8 1083 aa14.66□□□□□ -0.06
PVT1-203ENST00000513868 PAPPA2Q9BXP8 1791 aa14.65□□□□□ -0.06
PVT1-203ENST00000513868 EDIL3O43854 480 aa14.65□□□□□ -0.06
PVT1-203ENST00000513868 CTNND1O60716 968 aaKnown RBP14.65□□□□□ -0.06
PVT1-203ENST00000513868 SSC5DA1L4H1 1573 aa14.65□□□□□ -0.06
PVT1-203ENST00000513868 SNAP25P60880 206 aa14.65□□□□□ -0.06
PVT1-203ENST00000513868 NONOQ15233 471 aaKnown RBP eCLIP14.65□□□□□ -0.069e-7■■■■□ 23.6
PVT1-203ENST00000513868 LONRF3Q496Y0 759 aa14.65□□□□□ -0.06
PVT1-203ENST00000513868 FAM83BQ5T0W9 1011 aa14.65□□□□□ -0.06
PVT1-203ENST00000513868 PRAMEF18Q5VWM3 479 aa14.65□□□□□ -0.06
PVT1-203ENST00000513868 JAKMIP3Q5VZ66 844 aa14.65□□□□□ -0.06
PVT1-203ENST00000513868 ERCC4Q92889 916 aaPredicted RBP14.65□□□□□ -0.06
PVT1-203ENST00000513868 SDF4Q9BRK5 362 aa14.65□□□□□ -0.06
PVT1-203ENST00000513868 GINM1Q9NU53 330 aa14.65□□□□□ -0.06
PVT1-203ENST00000513868 GGA3Q9NZ52 723 aa14.65□□□□□ -0.06
PVT1-203ENST00000513868 ZNF112Q9UJU3 913 aa14.65□□□□□ -0.06
PVT1-203ENST00000513868 PRR12Q9ULL5 1215 aa14.65□□□□□ -0.06
PVT1-203ENST00000513868 RLFQ13129 1914 aa14.64□□□□□ -0.07
PVT1-203ENST00000513868 INPP5BP32019 993 aa14.64□□□□□ -0.07
PVT1-203ENST00000513868 C9orf131Q5VYM1 1079 aa14.64□□□□□ -0.07
PVT1-203ENST00000513868 ARL6IP4Q66PJ3 421 aaKnown RBP14.64□□□□□ -0.07
PVT1-203ENST00000513868 TBCKQ8TEA7 893 aa14.64□□□□□ -0.07
PVT1-203ENST00000513868 TMEM60Q9H2L4 133 aa14.64□□□□□ -0.07
PVT1-203ENST00000513868 PCDHA1Q9Y5I3 950 aa14.64□□□□□ -0.07
PVT1-203ENST00000513868 A0A087X0B3 334 aa14.63□□□□□ -0.07
PVT1-203ENST00000513868 PLA2G6O60733 806 aa14.63□□□□□ -0.07
PVT1-203ENST00000513868 STAT2P52630 851 aa14.63□□□□□ -0.07
PVT1-203ENST00000513868 UBE2SQ16763 222 aa14.63□□□□□ -0.07
PVT1-203ENST00000513868 SASS6Q6UVJ0 657 aa14.63□□□□□ -0.07
PVT1-203ENST00000513868 KRBA2Q6ZNG9 492 aa14.63□□□□□ -0.07
PVT1-203ENST00000513868 CUL5Q93034 780 aa14.63□□□□□ -0.07
PVT1-203ENST00000513868 EPSTI1Q96J88 318 aa14.63□□□□□ -0.07
PVT1-203ENST00000513868 ZNF341Q9BYN7 854 aa14.63□□□□□ -0.07
PVT1-203ENST00000513868 SH2D4AQ9H788 454 aa14.63□□□□□ -0.07
PVT1-203ENST00000513868 FAM13BQ9NYF5 915 aa14.63□□□□□ -0.07
PVT1-203ENST00000513868 KIAA1468Q9P260 1216 aa14.63□□□□□ -0.07
PVT1-203ENST00000513868 OTOFQ9HC10 1997 aa14.63□□□□□ -0.07
PVT1-203ENST00000513868 PTPRFP10586 1907 aa14.63□□□□□ -0.07
PVT1-203ENST00000513868 VWA3AA6NCI4 1184 aa14.62□□□□□ -0.07
PVT1-203ENST00000513868 MRPL12P52815 198 aaKnown RBP14.62□□□□□ -0.07
PVT1-203ENST00000513868 MDM2Q00987 491 aaPredicted RBP14.62□□□□□ -0.07
PVT1-203ENST00000513868 ZYXQ15942 572 aaKnown RBP14.62□□□□□ -0.07
PVT1-203ENST00000513868 ANO6Q4KMQ2 910 aa14.62□□□□□ -0.07
PVT1-203ENST00000513868 DCAF15Q66K64 600 aa14.62□□□□□ -0.07
PVT1-203ENST00000513868 NEK8Q86SG6 692 aa14.62□□□□□ -0.07
PVT1-203ENST00000513868 ELOA2Q8IYF1 753 aaPredicted RBP14.62□□□□□ -0.07
PVT1-203ENST00000513868 SYMPKQ92797 1274 aaKnown RBP14.62□□□□□ -0.07
PVT1-203ENST00000513868 WDR90Q96KV7 1748 aa14.62□□□□□ -0.07
PVT1-203ENST00000513868 AMNQ9BXJ7 453 aa14.62□□□□□ -0.07
PVT1-203ENST00000513868 PSTPIP2Q9H939 334 aa14.62□□□□□ -0.07
PVT1-203ENST00000513868 PITPNM2Q9BZ72 1349 aa14.62□□□□□ -0.07
PVT1-203ENST00000513868 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.61□□□□□ -0.07
PVT1-203ENST00000513868 POLR2DO15514 142 aaKnown RBP14.61□□□□□ -0.07
PVT1-203ENST00000513868 IKQ13123 557 aaPredicted RBP14.61□□□□□ -0.07
PVT1-203ENST00000513868 UVSSAQ2YD98 709 aa14.61□□□□□ -0.07
PVT1-203ENST00000513868 FBXO11Q86XK2 927 aa14.61□□□□□ -0.07
PVT1-203ENST00000513868 KIAA1683Q9H0B3 1180 aa14.61□□□□□ -0.07
PVT1-203ENST00000513868 ADARB2Q9NS39 739 aaKnown RBP14.61□□□□□ -0.07
PVT1-203ENST00000513868 FZD1Q9UP38 647 aa14.61□□□□□ -0.07
PVT1-203ENST00000513868 PPP2R3BQ9Y5P8 575 aa14.61□□□□□ -0.07
PVT1-203ENST00000513868 COL11A1P12107 1806 aaPredicted RBP14.61□□□□□ -0.07
PVT1-203ENST00000513868 A0A087WWV3 80 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms